Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 1.4e-69 266.2 130 100.0
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 4.0e-45 184.9 118 81.4
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 4.0e-45 184.9 127 74.8
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 8.9e-45 183.7 118 73.7
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 1.5e-44 183.0 120 77.5
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 5.8e-44 181.0 118 76.3
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 7.5e-44 180.6 118 78.8
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 1.3e-43 179.9 119 73.9
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 1.7e-43 179.5 118 76.3
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 2.2e-43 179.1 118 76.3
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 3.7e-43 178.3 120 75.8
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 3.7e-43 178.3 119 75.6
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 3.7e-43 178.3 118 76.3
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 8.3e-43 177.2 119 78.2
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.1e-42 176.8 118 75.4
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 1.4e-42 176.4 118 75.4
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 2.4e-42 175.6 120 74.2
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 2.4e-42 175.6 116 74.1
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 3.2e-42 175.3 119 76.5
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 4.1e-42 174.9 119 74.8
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 5.4e-42 174.5 118 74.6
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 2.7e-41 172.2 125 69.6
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 4.6e-41 171.4 120 72.5
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 6.0e-41 171.0 127 69.3
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 7.8e-41 170.6 122 70.5
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 1.0e-40 170.2 124 72.6
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 1.3e-40 169.9 117 76.1
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 1.7e-40 169.5 122 74.6
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 1.7e-40 169.5 118 72.9
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 1.7e-40 169.5 121 74.4
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 1.7e-40 169.5 118 72.0
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 2.3e-40 169.1 121 75.2
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 3.0e-40 168.7 122 68.9
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 3.0e-40 168.7 122 70.5
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 3.9e-40 168.3 121 74.4
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 5.0e-40 167.9 118 73.7
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 5.0e-40 167.9 118 73.7
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 5.0e-40 167.9 118 72.9
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 5.0e-40 167.9 118 72.9
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 8.6e-40 167.2 119 72.3
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 5.6e-39 164.5 117 69.2
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 9.5e-39 163.7 118 69.5
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.2e-38 163.3 121 69.4
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 1.2e-38 163.3 116 72.4
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 2.1e-38 162.5 118 70.3
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 3.6e-38 161.8 118 72.9
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 4.7e-38 161.4 121 67.8
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 4.7e-38 161.4 128 68.0
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 6.2e-38 161.0 132 64.4
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.1e-37 160.2 118 72.0
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.4e-37 159.8 118 72.0
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 1.8e-37 159.5 120 68.3
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 2.3e-37 159.1 128 68.8
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 4.0e-37 158.3 119 69.7
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 4.0e-37 158.3 128 65.6
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 4.0e-37 158.3 119 69.7
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 4.0e-37 158.3 119 68.9
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 5.2e-37 157.9 132 64.4
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 6.8e-37 157.5 118 71.2
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 8.9e-37 157.1 122 67.2
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 1.2e-36 156.8 118 71.2
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.0e-36 156.0 118 71.2
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 2.0e-36 156.0 119 68.1
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 2.6e-36 155.6 127 68.5
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 3.4e-36 155.2 127 66.9
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 7.5e-36 154.1 146 58.9
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 7.5e-36 154.1 118 66.9
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 1.7e-35 152.9 122 63.9
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 1.7e-35 152.9 120 65.0
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 2.9e-35 152.1 123 63.4
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 3.7e-35 151.8 118 64.4
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 3.7e-35 151.8 121 66.9
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 4.9e-35 151.4 129 64.3
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 6.4e-35 151.0 119 67.2
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 8.3e-35 150.6 118 65.3
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 1.1e-34 150.2 118 63.6
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 1.1e-34 150.2 119 67.2
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 1.1e-34 150.2 117 65.0
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 2.4e-34 149.1 118 64.4
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 3.2e-34 148.7 119 68.1
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 3.2e-34 148.7 119 68.1
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 3.2e-34 148.7 124 62.1
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 4.1e-34 148.3 117 68.4
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 4.1e-34 148.3 117 64.1
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 5.4e-34 147.9 118 66.1
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 9.2e-34 147.1 128 58.6
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 1.6e-33 146.4 119 66.4
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 1.6e-33 146.4 129 58.9
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 2.7e-33 145.6 120 66.7
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 2.7e-33 145.6 120 66.7
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 2.7e-33 145.6 120 66.7
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 2.7e-33 145.6 118 66.1
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.7e-33 145.6 118 68.6
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 7.8e-33 144.1 119 66.4
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 7.8e-33 144.1 120 62.5
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 1.0e-32 143.7 119 67.2
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 1.0e-32 143.7 118 61.0
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 1.3e-32 143.3 119 66.4
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 1.7e-32 142.9 119 66.4
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 2.1e-30 136.0 150 50.0
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 3.6e-30 135.2 126 56.3
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 1.4e-29 133.3 117 62.4
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 4.9e-27 124.8 84 76.2
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 5.4e-26 121.3 124 54.8
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 4.6e-25 118.2 127 52.0
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 3.3e-23 112.1 126 47.6
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 5.6e-23 111.3 127 48.8
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 1.1e-21 107.1 70 68.6
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 1.7e-16 89.7 75 62.7
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 5.1e-16 88.2 68 67.6
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 1.1e-13 80.5 50 72.0
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 9.0e-13 77.4 128 35.2
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 9.9e-12 73.9 121 36.4
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 2.9e-11 72.4 106 38.7
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 3.2e-10 68.9 67 52.2


User provided reference genes

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