Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0792 Trochodendron aralioides HOM05D005201 ORTHO05D006139 7.6e-87 323.9 180 100.0
Aqoxy3G02454 Aquilegia oxysepala HOM05D005201 ORTHO05D006139 3.2e-61 238.8 172 81.4
Potri.001G129800 Populus trichocarpa HOM05D005201 ORTHO05D006139 2.1e-60 236.1 179 81.0
ATR0829G041 Amborella trichopoda HOM05D005201 ORTHO05D006139 6.7e-59 231.1 174 78.7
COL.COLO4_16707 Corchorus olitorius HOM05D005201 ORTHO05D006139 1.1e-58 230.3 175 80.0
CANSAT21G0726 Cannabis sativa HOM05D005201 ORTHO05D006139 2.0e-58 229.6 167 77.8
Atru.chr6.2111 Acer truncatum HOM05D005201 ORTHO05D006139 2.6e-58 229.2 177 78.0
Duzib205G0777 Durio zibethinus HOM05D005201 ORTHO05D006139 2.6e-58 229.2 175 81.1
Actinidia25720 Actinidia chinensis HOM05D005201 ORTHO05D006139 4.4e-58 228.4 163 81.0
MELO3C016255.2 Cucumis melo HOM05D005201 ORTHO05D006139 4.4e-58 228.4 179 67.0
CSS0000299 Camellia sinensis var. sinensis HOM05D005201 ORTHO05D006139 2.8e-57 225.7 176 76.7
GSVIVG01036941001 Vitis vinifera HOM05D005201 ORTHO05D006139 8.2e-57 224.2 175 76.0
Actinidia03317 Actinidia chinensis HOM05D005201 ORTHO05D006139 1.1e-56 223.8 175 77.1
CSS0007100 Camellia sinensis var. sinensis HOM05D005201 ORTHO05D006139 1.1e-56 223.8 176 76.1
TWI60G0094 Tripterygium wilfordii HOM05D005201 ORTHO05D006139 4.1e-56 221.9 177 76.3
MD00G1078600 Malus domestica HOM05D005201 ORTHO05D006139 1.3e-54 216.9 169 76.9
MD06G1017600 Malus domestica HOM05D005201 ORTHO05D006139 6.5e-54 214.5 169 76.3
Sabra01G0100200 Salix brachista HOM05D005201 ORTHO05D006139 8.5e-54 214.2 242 51.7
Sed0016355 Sechium edule HOM05D005201 ORTHO05D006139 1.4e-53 213.4 173 74.0
MSTRG.25759 Avicennia marina HOM05D005201 ORTHO05D006139 4.7e-52 208.4 164 72.0
CiPaw.11G104600 Carya illinoinensis HOM05D005201 ORTHO05D006139 2.6e-50 202.6 175 73.7
Lalb_Chr16g0380611 Lupinus albus HOM05D005201 ORTHO05D006139 1.3e-49 200.3 166 71.7
SalBow4G2195 Salvia bowleyana HOM05D005201 ORTHO05D006139 2.8e-49 199.1 166 71.1
FvH4_5g24200 Fragaria vesca HOM05D005201 ORTHO05D006139 3.7e-49 198.7 176 57.4
FAN13G2355 Fragaria x ananassa HOM05D005201 ORTHO05D006139 3.7e-49 198.7 176 57.4
FAN18G1178 Fragaria x ananassa HOM05D005201 ORTHO05D006139 3.7e-49 198.7 176 57.4
Thecc.03G324300 Theobroma cacao HOM05D005201 ORTHO05D006139 6.3e-49 198.0 174 71.8
Glyma.01G150400 Glycine max HOM05D005201 ORTHO05D006139 1.1e-48 197.2 175 70.9
Potri.003G104400 Populus trichocarpa HOM05D005201 ORTHO05D006139 1.1e-48 197.2 179 71.5
CAN.G1741.1 Capsicum annuum HOM05D005201 ORTHO05D006139 1.4e-48 196.8 175 70.9
Sabra03G0071400 Salix brachista HOM05D005201 ORTHO05D006139 2.4e-48 196.1 179 72.1
FAN04G1315 Fragaria x ananassa HOM05D005201 ORTHO05D006139 4.1e-48 195.3 176 56.8
Oeu057144.1 Olea europaea HOM05D005201 ORTHO05D006139 4.1e-48 195.3 175 69.7
SGA_v2.0_scaffold269G46298 Striga asiatica HOM05D005201 ORTHO05D006139 5.3e-48 194.9 158 62.7
Gohir.A08G146800 Gossypium hirsutum HOM05D005201 ORTHO05D006139 7.0e-48 194.5 171 71.3
Lsat_1_v5_gn_6_15560 Lactuca sativa HOM05D005201 ORTHO05D006139 7.0e-48 194.5 156 74.4
Eucgr.D02584 Eucalyptus grandis HOM05D005201 ORTHO05D006139 9.1e-48 194.1 176 58.5
CAN.G947.20 Capsicum annuum HOM05D005201 ORTHO05D006139 1.2e-47 193.7 175 70.9
Gohir.D08G167900 Gossypium hirsutum HOM05D005201 ORTHO05D006139 1.2e-47 193.7 171 71.3
Gorai.004G175100 Gossypium raimondii HOM05D005201 ORTHO05D006139 1.2e-47 193.7 171 71.3
FAN08G2124 Fragaria x ananassa HOM05D005201 ORTHO05D006139 2.0e-47 193.0 176 56.2
THA.LOC104801352 Tarenaya hassleriana HOM05D005201 ORTHO05D006139 1.0e-46 190.7 162 72.8
CDE01G0225 Ceratophyllum demersum HOM05D005201 ORTHO05D006139 1.3e-46 190.3 171 56.7
Nitab4.5_0008438g0010 Nicotiana tabacum HOM05D005201 ORTHO05D006139 1.7e-46 189.9 175 69.1
CiPaw.12G072500 Carya illinoinensis HOM05D005201 ORTHO05D006139 3.8e-46 188.7 175 58.3
Prupe.5G018400 Prunus persica HOM05D005201 ORTHO05D006139 5.0e-46 188.3 169 58.6
RcHm_v2.0_Chr7g0214011 Rosa chinensis HOM05D005201 ORTHO05D006139 5.0e-46 188.3 176 66.5
THA.LOC104818333 Tarenaya hassleriana HOM05D005201 ORTHO05D006139 5.0e-46 188.3 168 70.2
Peaxi162Scf00045g01329 Petunia axillaris HOM05D005201 ORTHO05D006139 6.5e-46 188.0 169 71.6
Nitab4.5_0001327g0010 Nicotiana tabacum HOM05D005201 ORTHO05D006139 2.5e-45 186.0 168 70.2
Cc00_g08490 Coffea canephora HOM05D005201 ORTHO05D006139 3.2e-45 185.7 175 69.1
BcaC04g23459 Brassica carinata HOM05D005201 ORTHO05D006139 5.5e-45 184.9 162 69.8
BraA09t36375Z Brassica rapa HOM05D001456 ORTHO05D002799 5.5e-45 184.9 162 69.8
FAN14G2110 Fragaria x ananassa HOM05D005201 ORTHO05D006139 5.5e-45 184.9 165 60.0
FvH4_6g43270 Fragaria vesca HOM05D005201 ORTHO05D006139 1.2e-44 183.7 165 59.4
Ca_25081_v3 Cicer arietinum L. HOM05D005201 ORTHO05D006139 1.6e-44 183.3 175 56.6
FAN05G2652 Fragaria x ananassa HOM05D005201 ORTHO05D006139 1.6e-44 183.3 168 60.7
RcHm_v2.0_Chr2g0159541 Rosa chinensis HOM05D005201 ORTHO05D006139 1.6e-44 183.3 164 61.6
Sc07g0008280 Simmondsia chinensis HOM05D005201 ORTHO05D006139 1.6e-44 183.3 176 65.3
Medtr5g026550 Medicago truncatula HOM05D005201 ORTHO05D006139 2.1e-44 183.0 175 56.0
Rhsim01G0132000 Rhododendron simsii HOM05D005201 ORTHO05D006139 2.1e-44 183.0 175 55.4
FAN10G0178 Fragaria x ananassa HOM05D002235 ORTHO05D006139 2.7e-44 182.6 143 66.4
Solyc08g005910.3 Solanum lycopersicum HOM05D005201 ORTHO05D006139 2.7e-44 182.6 175 68.0
Sopen08g001880 Solanum pennellii HOM05D005201 ORTHO05D006139 2.7e-44 182.6 175 68.0
Nitab4.5_0009069g0010 Nicotiana tabacum HOM05D005201 ORTHO05D006139 3.6e-44 182.2 175 67.4
CsaV3_4G006880 Cucumis sativus L. HOM05D005201 ORTHO05D006139 4.7e-44 181.8 176 68.8
Oeu002017.1 Olea europaea HOM05D005201 ORTHO05D006139 4.7e-44 181.8 176 67.0
Sopen12g032120 Solanum pennellii HOM05D005201 ORTHO05D006139 4.7e-44 181.8 140 79.3
PGSC0003DMG400004473 Solanum tuberosum HOM05D005201 ORTHO05D006139 4.7e-44 181.8 175 68.0
A09p07260 Brassica napus HOM05D005201 ORTHO05D006139 6.1e-44 181.4 156 71.2
C09p08120 Brassica napus HOM05D005201 ORTHO05D006139 6.1e-44 181.4 156 71.2
BolC9t53725H Brassica oleracea HOM05D003751 ORTHO05D006139 6.1e-44 181.4 156 71.2
Thhalv10005013m.g Eutrema salsugineum HOM05D005201 ORTHO05D006139 1.4e-43 180.3 177 67.2
AL8G37890 Arabidopsis lyrata HOM05D005201 ORTHO05D006139 1.8e-43 179.9 162 69.8
Carub.0008s2190 Capsella rubella HOM05D005201 ORTHO05D006139 1.8e-43 179.9 162 70.4
Pp3c6_1190 Physcomitrium patens HOM05D005201 ORTHO05D006139 1.8e-43 179.9 161 64.6
AT5G61230 Arabidopsis thaliana HOM05D005201 ORTHO05D006139 2.3e-43 179.5 162 71.0
ClCG07G011320 Citrullus lanatus HOM05D005201 ORTHO05D006139 2.3e-43 179.5 176 68.2
SMO356G0124 Selaginella moellendorffii HOM05D005201 ORTHO05D006139 3.0e-43 179.1 148 73.0
Hma1.2p1_0268F.1_g107720 Hydrangea macrophylla HOM05D005201 ORTHO05D006139 5.2e-43 178.3 175 66.9
Psat2g143240 Pisum sativum HOM05D005201 ORTHO05D006139 5.2e-43 178.3 175 65.7
PGR031G3990 Punica granatum HOM05D005201 ORTHO05D006139 1.5e-42 176.8 178 67.4
PGR067G0002 Punica granatum HOM05D005201 ORTHO05D006139 1.5e-42 176.8 178 67.4
QL12p002095 Quercus lobata HOM05D005201 ORTHO05D006139 1.5e-42 176.8 174 65.5
PSO384G4870 Papaver somniferum HOM05D005201 ORTHO05D006139 2.0e-42 176.4 176 63.6
PSO339G2945 Papaver somniferum HOM05D005201 ORTHO05D006139 2.6e-42 176.0 176 61.9
TWI32G1103 Tripterygium wilfordii HOM05D005201 ORTHO05D006139 3.3e-42 175.6 177 65.0
SGA_v2.0_scaffold447G51751 Striga asiatica HOM05D003334 ORTHO05D004076 4.4e-42 175.3 164 65.2
Migut.A00504 Erythranthe guttata HOM05D005201 ORTHO05D006139 5.7e-42 174.9 175 64.0
Hund14321 Selenicereus undatus HOM05D005201 ORTHO05D006139 7.5e-42 174.5 177 63.3
Ah.12g056090 Amaranthus hybridus HOM05D005201 ORTHO05D006139 1.3e-41 173.7 166 55.4
Cpa.g.sc137.21 Carica papaya HOM05D005201 ORTHO05D006139 1.3e-41 173.7 170 65.9
AUR62022383 Chenopodium quinoa HOM05D005201 ORTHO05D006139 2.2e-41 172.9 177 63.8
AUR62007435 Chenopodium quinoa HOM05D005201 ORTHO05D006139 3.7e-41 172.2 177 62.1
Ciclev10002646m.g Citrus clementina HOM05D005201 ORTHO05D006139 3.7e-41 172.2 177 65.0
AUR62027303 Chenopodium quinoa HOM05D005201 ORTHO05D006139 1.1e-40 170.6 177 62.1
HanXRQChr08g0226681 Helianthus annuus HOM05D005201 ORTHO05D006139 1.1e-40 170.6 164 63.4
PGSC0003DMG400029376 Solanum tuberosum HOM05D005201 ORTHO05D006139 1.4e-40 170.2 138 75.4
DCAR_030956 Daucus carota HOM05D005201 ORTHO05D006139 2.4e-40 169.5 175 65.1
Phvul.002G126500 Phaseolus vulgaris HOM05D005201 ORTHO05D006139 3.1e-40 169.1 175 65.1
HanXRQChr07g0205241 Helianthus annuus HOM05D005201 ORTHO05D006139 4.1e-40 168.7 166 52.4
arahy.Tifrunner.gnm1.ann1.02E8LK Arachis hypogaea HOM05D005201 ORTHO05D006139 5.3e-40 168.3 175 64.6
arahy.Tifrunner.gnm1.ann1.2T22I7 Arachis hypogaea HOM05D005201 ORTHO05D006139 5.3e-40 168.3 175 64.6
Dinv09437 Davidia involucrata HOM05D005201 ORTHO05D006139 7.0e-40 167.9 175 65.7
PSO063G1500 Papaver somniferum HOM05D005201 ORTHO05D006139 9.1e-40 167.5 156 67.9
PSO782G0015 Papaver somniferum HOM05D005201 ORTHO05D006139 9.1e-40 167.5 156 67.9
CDE12G0445 Ceratophyllum demersum HOM05D005201 ORTHO05D006139 1.2e-39 167.2 169 52.7
Sed0020489 Sechium edule HOM05D005201 ORTHO05D006139 1.2e-39 167.2 175 64.6
TPR.G39676 Trifolium pratense HOM05D005201 ORTHO05D006139 1.2e-39 167.2 175 63.4
ECA240G4218 Erigeron canadensis HOM05D005201 ORTHO05D006139 1.6e-39 166.8 176 63.1
EL10Ac5g11893 Beta vulgaris HOM05D005201 ORTHO05D006139 2.0e-39 166.4 177 64.4
DCAR_000700 Daucus carota HOM05D005201 ORTHO05D006139 2.7e-39 166.0 152 61.2
Glyma.09G215400 Glycine max HOM05D005201 ORTHO05D006139 2.7e-39 166.0 175 62.9
Lj2g0015792 Lotus japonicus HOM05D005201 ORTHO05D006139 3.5e-39 165.6 175 64.6
Manes.04G035300 Manihot esculenta HOM05D005201 ORTHO05D006139 5.9e-39 164.9 179 62.6
MSTRG.11837 Avicennia marina HOM05D005201 ORTHO05D006139 1.7e-38 163.3 166 65.7
VMungo1215G2692 Vigna mungo HOM05D005201 ORTHO05D006139 1.7e-38 163.3 175 64.6
Lalb_Chr09g0325181 Lupinus albus HOM05D005201 ORTHO05D006139 2.9e-38 162.5 166 64.5
Ah.02g117370 Amaranthus hybridus HOM05D005201 ORTHO05D006139 6.5e-38 161.4 177 59.9
Lsat_1_v5_gn_5_60900 Lactuca sativa HOM05D005201 ORTHO05D006139 3.2e-37 159.1 164 59.8
Os02g0102600 Oryza sativa ssp. japonica HOM05D005201 ORTHO05D006139 9.4e-37 157.5 166 50.0
AagrBONN_evm.TU.Sc2ySwM_344.4086 Anthoceros agrestis HOM05D005201 ORTHO05D006139 4.4e-34 148.7 108 61.1
AT5G07840 Arabidopsis thaliana HOM05D005201 ORTHO05D006139 4.4e-34 148.7 168 60.1
Eucgr.B00905 Eucalyptus grandis HOM05D005201 ORTHO05D006139 4.4e-34 148.7 85 82.4
unitig_0.g2827 Utricularia gibba HOM05D005201 ORTHO05D006139 5.7e-34 148.3 156 64.1
Thhalv10014823m.g Eutrema salsugineum HOM05D005201 ORTHO05D006139 1.7e-33 146.7 168 60.1
SEGI_37761 Sequoiadendron giganteum HOM05D005201 ORTHO05D006139 2.2e-33 146.4 174 60.3
Aa31LG11G2130 Aethionema arabicum HOM05D005201 ORTHO05D006139 8.3e-33 144.4 168 60.1
Sp2g24460 Schrenkiella parvula HOM05D005201 ORTHO05D006139 1.2e-31 140.6 168 59.5
CARHR274980 Cardamine hirsuta HOM05D005201 ORTHO05D006139 2.7e-31 139.4 168 59.5
BraA03t13806Z Brassica rapa HOM05D005201 ORTHO05D006139 4.5e-31 138.7 165 58.2
BcaC06g33218 Brassica carinata HOM05D005201 ORTHO05D006139 7.7e-31 137.9 165 58.2
BolC7t45014H Brassica oleracea HOM05D005201 ORTHO05D006139 7.7e-31 137.9 165 58.2
A03p46860 Brassica napus HOM05D005201 ORTHO05D006139 1.0e-30 137.5 165 57.6
AL6G18180 Arabidopsis lyrata HOM05D005201 ORTHO05D006139 1.3e-30 137.1 177 57.1
Nitab4.5_0001159g0040 Nicotiana tabacum HOM05D005201 ORTHO05D006139 1.5e-29 133.7 170 60.6
vmacro21163 Vaccinium macrocarpon HOM05D005201 ORTHO05D006139 2.5e-29 132.9 131 55.0
C07p44910 Brassica napus HOM05D005201 ORTHO05D006139 4.2e-29 132.1 153 60.1
Mapoly0093s0041 Marchantia polymorpha HOM05D005201 ORTHO05D006139 4.2e-29 132.1 127 64.6
Solyc12g096260.2 Solanum lycopersicum HOM05D005201 ORTHO05D006139 3.0e-27 125.9 103 81.6
FAN02G0543 Fragaria x ananassa HOM05D002235 ORTHO05D006252 1.2e-26 124.0 77 75.3
Lj8A408T7 Lonicera japonica HOM05D005201 ORTHO05D006139 1.7e-25 120.2 131 51.1
Nn3g19216 Nelumbo nucifera HOM05D005201 ORTHO05D006139 4.9e-25 118.6 101 81.2
Dinv37463 Davidia involucrata HOM05D005201 ORTHO05D006139 8.3e-25 117.9 101 82.2
Haze_08003 Corylus avellana HOM05D005201 ORTHO05D006139 7.0e-24 114.8 331 29.3
Lsat_1_v5_gn_8_13820 Lactuca sativa HOM05D005201 ORTHO05D006139 4.5e-23 112.1 64 73.4
Zm00001eb229310 Zea mays HOM05D005201 ORTHO05D006139 1.9e-21 106.7 114 48.2
SGA_v2.0_scaffold2264G54095 Striga asiatica HOM05D005201 ORTHO05D006139 5.6e-21 105.1 111 48.6
CANSAT11G0816 Cannabis sativa HOM05D005201 ORTHO05D006139 2.1e-20 103.2 146 40.4
Peaxi162Scf00876g00121 Petunia axillaris HOM05D005201 ORTHO05D006139 7.3e-13 78.2 67 56.7


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