Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0733 Trochodendron aralioides HOM05D006772 ORTHO05D008367 2.0e-65 252.3 125 100.0
Nn1g00537 Nelumbo nucifera HOM05D006772 ORTHO05D008367 5.5e-44 181.0 127 72.4
QL12p005837 Quercus lobata HOM05D006772 ORTHO05D008367 2.1e-43 179.1 126 70.6
QL12p005804 Quercus lobata HOM05D006772 ORTHO05D008367 6.1e-43 177.6 126 69.8
Peaxi162Scf00460g00052 Petunia axillaris HOM05D006772 ORTHO05D008367 1.5e-41 172.9 123 70.7
Nitab4.5_0001666g0010 Nicotiana tabacum HOM05D006772 ORTHO05D008367 2.6e-41 172.2 123 70.7
Potri.003G091400 Populus trichocarpa HOM05D006772 ORTHO05D008367 4.4e-41 171.4 127 71.7
Sabra03G0061100 Salix brachista HOM05D006772 ORTHO05D008367 5.7e-41 171.0 126 69.0
Aqoxy3G02398 Aquilegia oxysepala HOM05D006772 ORTHO05D008367 4.8e-40 167.9 125 71.2
Nn6g33607 Nelumbo nucifera HOM05D006772 ORTHO05D008367 4.8e-40 167.9 125 68.8
RcHm_v2.0_Chr7g0209491 Rosa chinensis HOM05D006772 ORTHO05D008367 6.3e-40 167.5 130 66.9
PGSC0003DMG400043394 Solanum tuberosum HOM05D006772 ORTHO05D008367 6.3e-40 167.5 123 69.9
Haze_08246 Corylus avellana HOM05D006772 ORTHO05D008367 1.8e-39 166.0 129 68.2
Hma1.2p1_0991F.1_g245070 Hydrangea macrophylla HOM05D006772 ORTHO05D008367 4.1e-39 164.9 125 69.6
FvH4_5g21990 Fragaria vesca HOM05D006772 ORTHO05D008367 9.1e-39 163.7 128 64.8
FAN18G1611 Fragaria x ananassa HOM05D006772 ORTHO05D008367 9.1e-39 163.7 128 64.8
Potri.001G142700 Populus trichocarpa HOM05D006772 ORTHO05D008367 1.2e-38 163.3 127 68.5
Sopen08g025600 Solanum pennellii HOM05D006772 ORTHO05D008367 1.2e-38 163.3 123 69.1
COL.COLO4_17058 Corchorus olitorius HOM05D006772 ORTHO05D008367 1.6e-38 162.9 124 66.9
Thecc.03G229400 Theobroma cacao HOM05D006772 ORTHO05D008367 2.7e-38 162.2 126 68.3
FAN04G3098 Fragaria x ananassa HOM05D006772 ORTHO05D008367 3.5e-38 161.8 128 64.1
Solyc08g077020.1 Solanum lycopersicum HOM05D006772 ORTHO05D008367 3.5e-38 161.8 123 68.3
Sabra01G0111500 Salix brachista HOM05D006772 ORTHO05D008367 7.7e-38 160.6 126 68.3
CSS0038918 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 1.0e-37 160.2 125 68.8
Cc08_g02570 Coffea canephora HOM05D006772 ORTHO05D008367 1.0e-37 160.2 126 65.9
Cfa012424 Carpinus fangiana HOM05D006772 ORTHO05D008367 1.3e-37 159.8 130 66.2
Manes.17G012000 Manihot esculenta HOM05D006772 ORTHO05D008367 1.7e-37 159.5 130 64.6
TWI15G0236 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 1.7e-37 159.5 127 65.4
CiPaw.12G062700 Carya illinoinensis HOM05D006772 ORTHO05D008367 2.3e-37 159.1 132 62.9
FAN08G3182 Fragaria x ananassa HOM05D006772 ORTHO05D008367 2.3e-37 159.1 128 63.3
CSS0016213 Camellia sinensis var. sinensis HOM05D006772 ORTHO05D008367 2.9e-37 158.7 125 69.6
Prupe.5G037100 Prunus persica HOM05D006772 ORTHO05D008367 5.0e-37 157.9 130 66.2
arahy.Tifrunner.gnm1.ann1.6N9PAN Arachis hypogaea HOM05D006772 ORTHO05D008367 6.5e-37 157.5 125 64.8
arahy.Tifrunner.gnm1.ann1.WNGN5W Arachis hypogaea HOM05D006772 ORTHO05D008367 6.5e-37 157.5 125 64.8
Rhsim07G0126400 Rhododendron simsii HOM05D006772 ORTHO05D008367 6.5e-37 157.5 123 64.2
Duzib205G2036 Durio zibethinus HOM05D006772 ORTHO05D008367 1.5e-36 156.4 129 65.9
Gohir.A03G001600 Gossypium hirsutum HOM05D006772 ORTHO05D008367 2.5e-36 155.6 125 67.2
Nitab4.5_0000804g0080 Nicotiana tabacum HOM05D006772 ORTHO05D008367 3.3e-36 155.2 127 62.2
Gohir.D03G170700 Gossypium hirsutum HOM05D006772 ORTHO05D008367 4.2e-36 154.8 125 64.0
MD06G1033600 Malus domestica HOM05D006772 ORTHO05D008367 4.2e-36 154.8 127 63.8
Gorai.003G181100 Gossypium raimondii HOM05D006772 ORTHO05D008367 1.2e-35 153.3 125 63.2
FAN13G1934 Fragaria x ananassa HOM05D006772 ORTHO05D008367 3.6e-35 151.8 121 65.3
TWI60G0285 Tripterygium wilfordii HOM05D006772 ORTHO05D008367 6.1e-35 151.0 127 63.0
MD16G1275100 Malus domestica HOM05D006772 ORTHO05D008367 1.8e-34 149.4 128 61.7
HanXRQChr03g0084031 Helianthus annuus HOM05D006772 ORTHO05D008367 3.0e-34 148.7 130 59.2
CANSAT21G2446 Cannabis sativa HOM05D006772 ORTHO05D008367 4.0e-34 148.3 139 56.1
Lj2g0019736 Lotus japonicus HOM05D006772 ORTHO05D008367 6.8e-34 147.5 133 57.1
Eucgr.E00285 Eucalyptus grandis HOM05D006772 ORTHO05D008367 1.5e-33 146.4 130 60.0
VMungo1215G2403 Vigna mungo HOM05D006772 ORTHO05D008367 1.5e-33 146.4 130 57.7
Eucgr.D02187 Eucalyptus grandis HOM05D006772 ORTHO05D008367 5.7e-33 144.4 123 62.6
PGR042G0478 Punica granatum HOM05D006772 ORTHO05D008367 1.3e-32 143.3 130 59.2
Ca_24649_v3 Cicer arietinum L. HOM05D006772 ORTHO05D008367 2.2e-32 142.5 125 60.8
Sc01g0007510 Simmondsia chinensis HOM05D006772 ORTHO05D008367 2.2e-32 142.5 129 61.2
Ciclev10033079m.g Citrus clementina HOM05D006772 ORTHO05D008367 3.7e-32 141.7 128 60.2
Medtr5g014370 Medicago truncatula HOM05D006772 ORTHO05D008367 3.7e-32 141.7 131 55.0
Atru.chr6.1734 Acer truncatum HOM05D006772 ORTHO05D008367 8.3e-32 140.6 126 62.7
Psat2g173920 Pisum sativum HOM05D006772 ORTHO05D008367 1.1e-31 140.2 132 55.3
Glyma.11G043000 Glycine max HOM05D006772 ORTHO05D008367 3.1e-31 138.7 127 59.8
Gohir.D12G211500 Gossypium hirsutum HOM05D006772 ORTHO05D008367 3.1e-31 138.7 123 59.3
Gohir.A12G208800 Gossypium hirsutum HOM05D006772 ORTHO05D008367 4.1e-31 138.3 123 59.3
Gorai.008G227000 Gossypium raimondii HOM05D006772 ORTHO05D008367 4.1e-31 138.3 123 59.3
Sed0022952 Sechium edule HOM05D006772 ORTHO05D008367 4.1e-31 138.3 127 57.5
Glyma.17G155300 Glycine max HOM05D006772 ORTHO05D008367 5.4e-31 137.9 134 57.5
Phvul.002G006800 Phaseolus vulgaris HOM05D006772 ORTHO05D008367 5.4e-31 137.9 128 56.2
Glyma.05G111700 Glycine max HOM05D006772 ORTHO05D008367 7.0e-31 137.5 129 56.6
PGSC0003DMG400036785 Solanum tuberosum HOM05D006772 ORTHO05D008367 7.0e-31 137.5 114 62.3
Lsat_1_v5_gn_6_78680 Lactuca sativa HOM05D006772 ORTHO05D008367 1.3e-29 133.3 135 53.3
MBI05_g46462_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 1.3e-29 133.3 127 55.1
Ah.12g054950 Amaranthus hybridus HOM05D006772 ORTHO05D008367 1.7e-29 132.9 111 60.4
MELO3C003403.2 Cucumis melo HOM05D006772 ORTHO05D008367 1.7e-29 132.9 134 56.0
CsaV3_3G049240 Cucumis sativus L. HOM05D006772 ORTHO05D008367 1.7e-29 132.9 134 55.2
Lalb_Chr05g0213971 Lupinus albus HOM05D006772 ORTHO05D008367 1.7e-29 132.9 127 53.5
TPR.G7824 Trifolium pratense HOM05D006772 ORTHO05D008367 1.7e-29 132.9 124 56.5
MBI02_g14426_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 2.3e-29 132.5 126 61.1
Lalb_Chr16g0379141 Lupinus albus HOM05D006772 ORTHO05D008367 2.9e-29 132.1 129 52.7
VMungo0251G2965 Vigna mungo HOM05D006772 ORTHO05D008367 6.6e-29 131.0 134 55.2
CDE02G2078 Ceratophyllum demersum HOM05D004438 ORTHO05D005256 8.6e-29 130.6 120 56.7
ECA240G4560 Erigeron canadensis HOM05D000236 ORTHO05D000192 2.5e-28 129.0 119 54.6
Sed0027084 Sechium edule HOM05D006772 ORTHO05D008367 3.3e-28 128.6 129 55.8
CDE08G0662 Ceratophyllum demersum HOM05D006772 ORTHO05D008367 5.6e-28 127.9 119 55.5
CiPaw.11G092300 Carya illinoinensis HOM05D006772 ORTHO05D008367 1.4e-26 123.2 125 56.8
DCAR_024967 Daucus carota HOM05D006772 ORTHO05D008367 2.3e-26 122.5 130 56.9
Gohir.A11G030300 Gossypium hirsutum HOM05D006772 ORTHO05D008367 2.0e-25 119.4 128 50.8
Lj4g0015139 Lotus japonicus HOM05D006772 ORTHO05D008367 9.8e-25 117.1 140 48.6
THA.LOC104807956 Tarenaya hassleriana HOM05D006772 ORTHO05D008367 2.2e-24 115.9 124 54.0
Lj4g0019114 Lotus japonicus HOM05D006772 ORTHO05D008367 1.1e-23 113.6 141 48.2
Peaxi162Scf00102g00514 Petunia axillaris HOM05D006772 ORTHO05D008367 2.0e-22 109.4 123 48.8
BcaB02g09448 Brassica carinata HOM05D006772 ORTHO05D008367 6.0e-22 107.8 126 46.0
ATR0564G457 Amborella trichopoda HOM05D006772 ORTHO05D008367 1.7e-21 106.3 135 47.4
A05p10490 Brassica napus HOM05D006772 ORTHO05D008367 1.7e-21 106.3 126 49.2
BraA05t19987Z Brassica rapa HOM05D006772 ORTHO05D008367 1.7e-21 106.3 126 49.2
BcaB02g09453 Brassica carinata HOM05D006772 ORTHO05D008367 2.3e-21 105.9 126 48.4
BcaB02g09458 Brassica carinata HOM05D006772 ORTHO05D008367 2.3e-21 105.9 126 48.4
BcaB02g09462 Brassica carinata HOM05D006772 ORTHO05D008367 2.3e-21 105.9 126 48.4
BcaC02g11632 Brassica carinata HOM05D006772 ORTHO05D008367 2.3e-21 105.9 126 48.4
C04p12890 Brassica napus HOM05D006772 ORTHO05D008367 2.3e-21 105.9 126 48.4
BolC4t22934H Brassica oleracea HOM05D006772 ORTHO05D008367 3.9e-21 105.1 126 48.4
PGR031G2239 Punica granatum HOM05D006772 ORTHO05D008367 3.9e-21 105.1 138 46.4
Dinv28946 Davidia involucrata HOM05D006772 ORTHO05D008367 6.6e-21 104.4 79 64.6
C04p64260 Brassica napus HOM05D006772 ORTHO05D008367 4.3e-20 101.7 126 46.0
A04p26870 Brassica napus HOM05D006772 ORTHO05D008367 7.3e-20 100.9 126 46.0
BraA04t18187Z Brassica rapa HOM05D006772 ORTHO05D008367 7.3e-20 100.9 126 46.0
Thhalv10017432m.g Eutrema salsugineum HOM05D006772 ORTHO05D008367 1.6e-19 99.8 126 46.0
BcaC02g07718 Brassica carinata HOM05D006772 ORTHO05D008367 2.1e-19 99.4 126 45.2
BolC4t27910H Brassica oleracea HOM05D006772 ORTHO05D008367 2.1e-19 99.4 126 45.2
Sp4g17500 Schrenkiella parvula HOM05D006772 ORTHO05D008367 2.8e-19 99.0 126 44.4
CARHR129440 Cardamine hirsuta HOM05D006772 ORTHO05D008367 4.7e-19 98.2 126 45.2
Aa31LG9G15310 Aethionema arabicum HOM05D006772 ORTHO05D008367 2.3e-18 95.9 126 43.7
AT2G35290 Arabidopsis thaliana HOM05D006772 ORTHO05D008367 2.3e-18 95.9 126 45.2
BcaB06g28837 Brassica carinata HOM05D006772 ORTHO05D008367 1.5e-17 93.2 126 44.4
Carub.0004s1698 Capsella rubella HOM05D006772 ORTHO05D008367 1.5e-17 93.2 124 45.2
HPP92_011259 Vanilla planifolia HOM05D006772 ORTHO05D008367 1.5e-17 93.2 116 46.6
Os03g0170100 Oryza sativa ssp. japonica HOM05D006772 ORTHO05D008367 2.6e-17 92.4 118 51.7
AL4G31320 Arabidopsis lyrata HOM05D006772 ORTHO05D008367 1.7e-16 89.7 115 46.1
Gohir.D11G028900 Gossypium hirsutum HOM05D006772 ORTHO05D008367 8.3e-16 87.4 103 47.6
Zm00001eb402290 Zea mays HOM05D006772 ORTHO05D008367 1.9e-15 86.3 114 48.2
MBI02_g18931_MAGBIO Magnolia biondii HOM05D006772 ORTHO05D008367 4.6e-14 81.6 126 46.0
SEGI_37864 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 5.1e-13 78.2 89 44.9
EL10Ac5g12135 Beta vulgaris HOM05D003523 ORTHO05D008367 1.9e-12 76.3 77 50.6
Gorai.007G031500 Gossypium raimondii HOM05D006772 ORTHO05D008367 4.3e-12 75.1 93 44.1
SEGI_18606 Sequoiadendron giganteum HOM05D006772 ORTHO05D008367 4.0e-10 68.6 89 46.1
Ah.14g084670 Amaranthus hybridus HOM05D001618 ORTHO05D001486 6.0e-06 54.7 89 39.3
Mapoly0047s0021 Marchantia polymorpha HOM05D001618 ORTHO05D001486 6.0e-06 54.7 108 29.6
TPR.G31744 Trifolium pratense HOM05D001618 ORTHO05D001486 7.8e-06 54.3 107 35.5


User provided reference genes

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