Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 7.0e-202 707.2 394 100.0
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 4.7e-182 641.3 369 98.1
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 9.6e-143 510.8 386 67.4
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 2.1e-142 509.6 386 67.4
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 1.5e-140 503.4 385 67.5
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 1.9e-138 496.5 385 66.2
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 2.4e-138 496.1 387 72.9
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 7.1e-138 494.6 385 67.3
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 2.1e-137 493.0 385 70.6
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 2.1e-137 493.0 406 72.9
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 2.7e-137 492.7 385 65.2
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 6.0e-137 491.5 385 72.2
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 7.4e-135 484.6 385 70.9
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 7.4e-135 484.6 385 71.2
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 1.4e-133 480.3 386 73.3
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 6.9e-133 478.0 386 64.5
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 4.5e-132 475.3 385 64.2
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 1.7e-131 473.4 389 63.8
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 8.4e-131 471.1 386 61.9
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 5.5e-130 468.4 386 62.2
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 3.5e-129 465.7 386 61.1
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 7.9e-129 464.5 386 61.9
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 2.3e-128 463.0 386 68.7
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 2.5e-127 459.5 385 62.9
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 2.2e-126 456.4 394 62.4
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 3.4e-124 449.1 386 65.3
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 5.9e-124 448.4 408 65.0
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 1.0e-123 447.6 393 69.5
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 1.7e-123 446.8 385 60.5
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 8.5e-123 444.5 388 66.5
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 3.2e-122 442.6 388 61.3
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 1.2e-121 440.7 392 61.0
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 1.6e-121 440.3 385 67.3
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 2.1e-121 439.9 388 60.8
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.0e-120 437.6 395 64.6
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 1.0e-120 437.6 399 63.7
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 1.8e-120 436.8 385 60.0
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 2.3e-120 436.4 386 64.2
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 5.1e-120 435.3 386 59.3
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 5.1e-120 435.3 389 60.2
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 1.1e-119 434.1 386 63.7
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 4.3e-119 432.2 385 57.9
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 5.7e-119 431.8 386 58.0
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 9.7e-119 431.0 391 58.8
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 1.4e-117 427.2 386 57.5
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 9.1e-117 424.5 383 58.7
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 1.5e-116 423.7 385 58.7
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 5.5e-114 415.2 385 58.4
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 1.6e-113 413.7 394 60.9
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 1.8e-112 410.2 394 60.4
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 5.1e-112 408.7 245 79.6
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 6.7e-112 408.3 398 58.8
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 1.1e-111 407.5 387 56.8
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 7.4e-111 404.8 388 62.9
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 1.3e-110 404.1 385 61.8
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 1.3e-110 404.1 397 58.9
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 3.7e-110 402.5 385 59.0
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 3.1e-109 399.4 386 56.2
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 9.1e-109 397.9 246 77.6
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 9.1e-109 397.9 406 54.4
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 1.2e-108 397.5 389 55.8
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 2.0e-108 396.7 386 60.4
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 2.6e-108 396.4 386 61.7
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 2.6e-108 396.4 392 56.4
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 5.9e-108 395.2 386 60.9
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 5.9e-108 395.2 387 55.8
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 1.0e-107 394.4 388 55.4
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 1.7e-107 393.7 396 55.8
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 5.0e-107 392.1 243 75.3
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 8.5e-107 391.3 395 56.7
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 2.5e-106 389.8 352 59.7
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 1.6e-105 387.1 391 54.5
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 6.1e-105 385.2 424 55.0
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 1.8e-104 383.6 389 58.6
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 5.2e-104 382.1 388 53.4
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.1e-103 380.9 340 58.2
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 2.0e-103 380.2 386 61.9
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 3.3e-103 379.4 351 65.2
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 3.3e-103 379.4 243 72.4
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 3.3e-103 379.4 403 52.9
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 2.8e-102 376.3 402 54.0
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 2.8e-102 376.3 241 72.6
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 8.2e-102 374.8 242 72.3
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 2.6e-100 369.8 242 72.7
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 7.7e-100 368.2 321 57.6
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 1.0e-99 367.9 366 58.7
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 2.9e-99 366.3 409 50.4
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 2.7e-97 359.8 459 47.3
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 2.0e-95 353.6 251 63.7
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 3.3e-95 352.8 423 52.0
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 9.7e-95 351.3 359 53.5
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 2.8e-94 349.7 360 60.3
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 6.3e-94 348.6 398 52.3
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 1.7e-91 340.5 235 67.7
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 4.2e-90 335.9 248 63.3
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 1.2e-84 317.8 221 66.5
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 3.6e-81 306.2 239 60.7
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 3.6e-81 306.2 239 60.7
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 4.1e-77 292.7 238 59.7
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 5.4e-77 292.4 241 59.3
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.2e-76 291.2 173 82.7
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 1.7e-75 287.3 340 46.5
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 1.4e-72 277.7 398 41.0
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 2.6e-71 273.5 161 78.9
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 4.9e-70 269.2 202 65.8
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 5.4e-69 265.8 205 61.0
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 5.4e-69 265.8 205 61.0
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 6.2e-65 252.3 246 51.2
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 4.4e-55 219.5 215 50.7
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 2.4e-53 213.8 143 70.6
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 3.3e-50 203.4 257 50.2
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 1.8e-48 197.6 198 49.5
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 9.9e-47 191.8 214 43.0
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 2.7e-36 157.1 131 56.5
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.1e-32 145.2 69 97.1
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 1.4e-32 144.8 118 59.3
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 2.4e-24 117.5 61 85.2
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 2.4e-24 117.5 96 56.2
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 5.5e-21 106.3 59 81.4
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 1.1e-16 92.0 52 76.9
Atru.chr9.1146 Acer truncatum HOM05D006116 ORTHO05D007795 3.0e-11 73.9 110 43.6
CiPaw.12G058200 Carya illinoinensis HOM05D006116 ORTHO05D007795 2.4e-08 64.3 102 47.1


User provided reference genes

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