Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 9.5e-56 219.9 110 100.0
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 4.7e-39 164.5 118 72.0
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 1.2e-37 159.8 124 68.5
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 4.4e-37 157.9 122 72.1
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 3.7e-36 154.8 112 75.0
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 4.9e-36 154.5 113 75.2
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 1.1e-35 153.3 112 75.0
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 1.9e-35 152.5 110 74.5
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 3.2e-35 151.8 109 69.7
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 5.4e-35 151.0 111 73.0
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 7.0e-35 150.6 121 67.8
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 2.1e-34 149.1 119 68.9
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 2.1e-34 149.1 113 71.7
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 3.5e-34 148.3 110 70.0
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 4.6e-34 147.9 118 66.9
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 7.8e-34 147.1 110 72.7
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 7.8e-34 147.1 111 69.4
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 1.3e-33 146.4 110 69.1
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 1.3e-33 146.4 147 59.9
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 1.3e-33 146.4 110 68.2
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 2.3e-33 145.6 80 90.0
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 2.3e-33 145.6 114 70.2
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 2.3e-33 145.6 120 70.0
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 3.9e-33 144.8 109 69.7
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 5.0e-33 144.4 111 67.6
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 6.6e-33 144.1 78 84.6
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 6.6e-33 144.1 117 68.4
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 8.6e-33 143.7 109 67.9
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 1.5e-32 142.9 115 68.7
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 1.9e-32 142.5 76 88.2
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 2.5e-32 142.1 117 68.4
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 2.5e-32 142.1 107 71.0
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 2.5e-32 142.1 109 68.8
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 2.5e-32 142.1 112 69.6
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 3.3e-32 141.7 115 67.8
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 4.3e-32 141.4 113 69.9
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 4.3e-32 141.4 106 70.8
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 5.6e-32 141.0 87 82.8
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 5.6e-32 141.0 118 67.8
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 7.3e-32 140.6 110 62.7
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 9.5e-32 140.2 113 69.0
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 1.2e-31 139.8 90 78.9
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 1.2e-31 139.8 118 67.8
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 1.2e-31 139.8 112 66.1
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 1.2e-31 139.8 71 91.5
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 1.2e-31 139.8 81 80.2
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 1.2e-31 139.8 78 82.1
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 1.6e-31 139.4 114 68.4
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 1.6e-31 139.4 129 63.6
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 2.8e-31 138.7 81 81.5
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 2.8e-31 138.7 90 77.8
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 2.8e-31 138.7 118 66.9
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 2.8e-31 138.7 110 66.4
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 4.7e-31 137.9 114 67.5
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 6.2e-31 137.5 105 70.5
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 8.1e-31 137.1 110 62.7
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 8.1e-31 137.1 109 64.2
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 8.1e-31 137.1 79 83.5
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 1.4e-30 136.3 113 66.4
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 1.4e-30 136.3 113 68.1
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 1.4e-30 136.3 101 71.3
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 1.4e-30 136.3 81 77.8
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 1.8e-30 136.0 118 63.6
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 1.8e-30 136.0 110 61.8
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 2.3e-30 135.6 108 66.7
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 2.3e-30 135.6 112 67.9
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 3.1e-30 135.2 109 66.1
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 3.1e-30 135.2 115 64.3
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 3.1e-30 135.2 125 65.6
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 6.8e-30 134.0 115 64.3
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 6.8e-30 134.0 114 66.7
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 6.8e-30 134.0 124 63.7
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 8.9e-30 133.7 114 64.0
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 8.9e-30 133.7 114 64.0
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 8.9e-30 133.7 114 64.0
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 8.9e-30 133.7 121 59.5
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 1.2e-29 133.3 89 75.3
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 1.2e-29 133.3 87 77.0
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 1.2e-29 133.3 125 65.6
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 1.5e-29 132.9 72 84.7
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 1.5e-29 132.9 116 62.9
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 1.5e-29 132.9 113 64.6
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 2.0e-29 132.5 124 62.9
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 2.6e-29 132.1 125 63.2
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 2.6e-29 132.1 114 62.3
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 3.4e-29 131.7 100 64.0
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 4.4e-29 131.3 78 79.5
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 4.4e-29 131.3 117 60.7
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 1.3e-28 129.8 78 80.8
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 2.2e-28 129.0 125 64.0
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 1.1e-27 126.7 120 57.5
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 1.1e-27 126.7 103 65.0
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 3.2e-27 125.2 112 61.6
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 6.0e-26 120.9 62 85.5
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 7.8e-26 120.6 77 76.6
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 1.3e-25 119.8 62 85.5
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 6.6e-25 117.5 87 67.8
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 5.6e-24 114.4 90 65.6
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 2.4e-22 109.0 81 64.2
AUR62023670 Chenopodium quinoa HOM05D007196 ORTHO05D001134 2.4e-22 109.0 74 73.0
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 1.2e-21 106.7 110 56.4
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 3.4e-21 105.1 114 55.3
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 2.2e-20 102.4 69 66.7
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 8.7e-17 90.5 85 58.8
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 1.1e-16 90.1 96 60.4
Nn4g26452 Nelumbo nucifera HOM05D007196 ORTHO05D009100 8.1e-15 84.0 92 58.7
Haze_26518 Corylus avellana HOM05D007196 ORTHO05D009100 4.4e-13 78.2 63 54.0
VMungo0464G1496 Vigna mungo HOM05D007196 ORTHO05D009100 2.4e-11 72.4 80 55.0
Cc05_g04470 Coffea canephora HOM05D007196 ORTHO05D009100 7.1e-11 70.9 78 52.6
ATR0757G208 Amborella trichopoda HOM05D007196 ORTHO05D009100 1.6e-10 69.7 76 55.3
FAN03G1444 Fragaria x ananassa HOM05D000077 ORTHO05D000981 1.6e-07 59.7 91 53.8


User provided reference genes

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