Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0680 Trochodendron aralioides HOM05D000187 ORTHO05D000926 1.6e-95 352.8 186 100.0
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 5.0e-65 251.5 133 99.2
TAR629G2300 Trochodendron aralioides HOM05D000187 ORTHO05D000926 2.5e-40 169.5 174 59.8
TAR636G2657 Trochodendron aralioides HOM05D000187 ORTHO05D000926 9.7e-37 157.5 166 60.8
MBI04_g00299_MAGBIO Magnolia biondii HOM05D000187 ORTHO05D000926 3.7e-36 155.6 178 51.1
Aqoxy7G00433 Aquilegia oxysepala HOM05D000187 ORTHO05D000926 9.1e-35 151.0 170 54.1
PSO782G4273 Papaver somniferum HOM05D000187 ORTHO05D000926 2.0e-34 149.8 172 54.7
PSO478G2905 Papaver somniferum HOM05D000187 ORTHO05D000926 4.7e-31 138.7 183 49.7
Nn1g01373 Nelumbo nucifera HOM05D000187 ORTHO05D000926 1.3e-28 130.6 171 53.8
MBI12_g29754_MAGBIO Magnolia biondii HOM05D000187 ORTHO05D000926 2.3e-22 109.8 160 44.4
MBI12_g29753_MAGBIO Magnolia biondii HOM05D000187 ORTHO05D000926 9.2e-19 97.8 175 40.6
MBI07_g30197_MAGBIO Magnolia biondii HOM05D000187 ORTHO05D000926 1.7e-17 93.6 125 46.4
HPP92_015042 Vanilla planifolia HOM05D000187 ORTHO05D000926 1.9e-16 90.1 174 39.1
Dinv28475 Davidia involucrata HOM05D002353 ORTHO05D002461 4.3e-16 89.0 168 40.5
ATR0757G108 Amborella trichopoda HOM05D000187 ORTHO05D000926 9.5e-16 87.8 164 40.9
Nitab4.5_0001559g0050 Nicotiana tabacum HOM05D000187 ORTHO05D000926 8.9e-14 81.3 155 40.0
Nitab4.5_0001083g0140 Nicotiana tabacum HOM05D000187 ORTHO05D000926 1.5e-13 80.5 161 39.8
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 5.8e-13 78.6 168 37.5
Os04g0571200 Oryza sativa ssp. japonica HOM05D000187 ORTHO05D000926 3.7e-12 75.9 181 33.1
Peaxi162Scf00915g00247 Petunia axillaris HOM05D000187 ORTHO05D000926 4.9e-12 75.5 160 39.4
GSVIVG01020798001 Vitis vinifera HOM05D000187 ORTHO05D000926 4.9e-12 75.5 148 40.5
Solyc03g026150.3 Solanum lycopersicum HOM05D000187 ORTHO05D000926 1.9e-11 73.6 159 39.0
TAR374G0114 Trochodendron aralioides HOM05D000187 ORTHO05D000926 1.9e-11 73.6 145 39.3
Sopen03g005020 Solanum pennellii HOM05D000187 ORTHO05D000926 4.1e-11 72.4 159 39.0
DCAR_020233 Daucus carota HOM05D000187 ORTHO05D000926 9.2e-11 71.2 159 38.4
Hma1.2p1_0270F.1_g108380 Hydrangea macrophylla HOM05D000187 ORTHO05D000926 1.2e-10 70.9 170 35.3
Actinidia34085 Actinidia chinensis HOM05D000187 ORTHO05D000926 3.5e-10 69.3 168 33.9
DCAR_008875 Daucus carota HOM05D000187 ORTHO05D000926 1.7e-09 67.0 173 33.5
PGSC0003DMG400014316 Solanum tuberosum HOM05D000187 ORTHO05D000926 2.3e-09 66.6 162 36.4
CDE04G0487 Ceratophyllum demersum HOM05D000187 ORTHO05D000926 5.0e-09 65.5 168 30.4
Oeu062772.1 Olea europaea HOM05D000187 ORTHO05D000926 6.6e-09 65.1 162 34.6
Cc02_g03340 Coffea canephora HOM05D000187 ORTHO05D000926 1.9e-08 63.5 152 36.2
ECA232G1066 Erigeron canadensis HOM05D000187 ORTHO05D000926 3.3e-08 62.8 158 34.2
HanXRQChr13g0417901 Helianthus annuus HOM05D000187 ORTHO05D000926 4.3e-08 62.4 148 35.1
Rhsim03G0177600 Rhododendron simsii HOM05D000187 ORTHO05D000926 5.6e-08 62.0 217 29.0
Sc13g0008510 Simmondsia chinensis HOM05D000187 ORTHO05D000926 1.2e-07 60.8 165 34.5
Migut.F01141 Erythranthe guttata HOM05D000187 ORTHO05D000926 2.1e-07 60.1 150 34.0
AUR62016022 Chenopodium quinoa HOM05D000187 ORTHO05D000926 2.8e-07 59.7 148 36.5
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 3.6e-07 59.3 153 34.6
Sopen03g005000 Solanum pennellii HOM05D000187 ORTHO05D000926 1.8e-06 57.0 121 38.8
AUR62021227 Chenopodium quinoa HOM05D000196 ORTHO05D000378 4.0e-06 55.8 149 36.2
Hund04708 Selenicereus undatus HOM05D000187 ORTHO05D000926 4.0e-06 55.8 164 31.7


User provided reference genes

Program Settings