Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0672 Trochodendron aralioides HOM05D007326 ORTHO05D009048 4.3e-53 211.1 108 100.0
TAR629G2746 Trochodendron aralioides HOM05D007326 ORTHO05D009048 7.9e-39 163.7 107 82.2
TAR629G0302 Trochodendron aralioides HOM05D007326 ORTHO05D009048 1.5e-21 106.3 77 77.9
Aqoxy7G00103 Aquilegia oxysepala HOM05D007326 ORTHO05D009048 7.4e-13 77.4 86 52.3
MBI06_g08457_MAGBIO Magnolia biondii HOM05D007326 ORTHO05D009048 1.3e-12 76.6 80 60.0
Nn4g24310 Nelumbo nucifera HOM05D000291 ORTHO05D009048 2.2e-12 75.9 85 55.3
CDE05G0016 Ceratophyllum demersum HOM05D007326 ORTHO05D009048 2.8e-12 75.5 89 51.7
SGA_v2.0_scaffold105G30435 Striga asiatica HOM05D007326 ORTHO05D009048 6.3e-12 74.3 73 53.4
SGA_v2.0_scaffold55G19762 Striga asiatica HOM05D007326 ORTHO05D009048 1.1e-11 73.6 88 47.7
Atru.chr1.147 Acer truncatum HOM05D007326 ORTHO05D009048 2.4e-11 72.4 117 41.0
Rhsim09G0011500 Rhododendron simsii HOM05D007326 ORTHO05D009048 5.3e-11 71.2 113 38.9
COL.COLO4_03426 Corchorus olitorius HOM05D007326 ORTHO05D009048 7.0e-11 70.9 81 50.6
Solyc03g083450.1 Solanum lycopersicum HOM05D007326 ORTHO05D009048 9.1e-11 70.5 39 76.9
Psat0s2030g0040 Pisum sativum HOM05D007326 ORTHO05D009048 1.2e-10 70.1 36 77.8
Glyma.07G086800 Glycine max HOM05D007326 ORTHO05D009048 1.6e-10 69.7 74 51.4
Peaxi162Scf00550g00426 Petunia axillaris HOM05D007326 ORTHO05D009048 1.6e-10 69.7 56 64.3
Glyma.09G190100 Glycine max HOM05D007326 ORTHO05D009048 2.0e-10 69.3 77 51.9
TPR.G14875 Trifolium pratense HOM05D007326 ORTHO05D009048 2.0e-10 69.3 75 49.3
Gohir.A11G014200 Gossypium hirsutum HOM05D007326 ORTHO05D009048 3.5e-10 68.6 63 54.0
Gohir.D11G014400 Gossypium hirsutum HOM05D007326 ORTHO05D009048 3.5e-10 68.6 63 54.0
Gorai.007G014800 Gossypium raimondii HOM05D007326 ORTHO05D009048 3.5e-10 68.6 63 54.0
THA.LOC104819263 Tarenaya hassleriana HOM05D007326 ORTHO05D009048 4.5e-10 68.2 32 87.5
Actinidia06160 Actinidia chinensis HOM05D007326 ORTHO05D009048 5.9e-10 67.8 69 53.6
Os06g0157800 Oryza sativa ssp. japonica HOM05D007326 ORTHO05D009048 5.9e-10 67.8 32 90.6
Medtr3g109290 Medicago truncatula HOM05D007326 ORTHO05D009048 7.7e-10 67.4 34 79.4
EL10Ac9g21379 Beta vulgaris HOM05D007326 ORTHO05D009048 1.0e-09 67.0 34 79.4
FAN10G1221 Fragaria x ananassa HOM05D007326 ORTHO05D009048 1.0e-09 67.0 36 72.2
Manes.05G205250 Manihot esculenta HOM05D007326 ORTHO05D009048 1.3e-09 66.6 44 70.5
Ah.04g150610 Amaranthus hybridus HOM05D007326 ORTHO05D009048 1.7e-09 66.2 32 84.4
VMungo0464G1195 Vigna mungo HOM05D007326 ORTHO05D009048 1.7e-09 66.2 77 50.6
CSS0006442 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 2.2e-09 65.9 33 81.8
Eucgr.A01472 Eucalyptus grandis HOM05D007326 ORTHO05D009048 2.2e-09 65.9 32 87.5
Oeu037093.1 Olea europaea HOM05D007326 ORTHO05D009048 2.2e-09 65.9 72 51.4
CAN.G108.61 Capsicum annuum HOM05D007326 ORTHO05D009048 2.9e-09 65.5 101 41.6
Potri.015G017700 Populus trichocarpa HOM05D007326 ORTHO05D009048 2.9e-09 65.5 93 45.2
CSS0025602 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 3.8e-09 65.1 32 84.4
Actinidia06159 Actinidia chinensis HOM05D007326 ORTHO05D009048 5.0e-09 64.7 69 53.6
FAN10G2940 Fragaria x ananassa HOM05D007326 ORTHO05D009048 5.0e-09 64.7 36 69.4
Pp3c23_5100 Physcomitrium patens HOM05D007326 ORTHO05D009048 5.0e-09 64.7 48 62.5
Sed0023316 Sechium edule HOM05D007326 ORTHO05D009048 5.0e-09 64.7 69 46.4
Zm00001eb376510 Zea mays HOM05D007326 ORTHO05D009048 5.0e-09 64.7 39 71.8
MSTRG.55 Avicennia marina HOM05D007326 ORTHO05D009048 6.5e-09 64.3 105 37.1
Aa31LG1G16060 Aethionema arabicum HOM05D007326 ORTHO05D009048 8.5e-09 63.9 32 84.4
AUR62013031 Chenopodium quinoa HOM05D007326 ORTHO05D009048 8.5e-09 63.9 67 49.3
Ciclev10006260m.g Citrus clementina HOM05D007326 ORTHO05D009048 8.5e-09 63.9 91 44.0
Dinv29296 Davidia involucrata HOM05D007326 ORTHO05D009048 8.5e-09 63.9 70 52.9
Nitab4.5_0002492g0030 Nicotiana tabacum HOM05D007326 ORTHO05D009048 8.5e-09 63.9 101 39.6
PGSC0003DMG400009118 Solanum tuberosum HOM05D007326 ORTHO05D009048 8.5e-09 63.9 103 42.7
PGR042G3637 Punica granatum HOM05D007326 ORTHO05D009048 1.1e-08 63.5 88 45.5
SEGI_38766 Sequoiadendron giganteum HOM05D007326 ORTHO05D009048 1.1e-08 63.5 32 84.4
AL8G43810 Arabidopsis lyrata HOM05D007326 ORTHO05D009048 1.5e-08 63.2 32 84.4
ECA232G0297 Erigeron canadensis HOM05D007326 ORTHO05D009048 1.5e-08 63.2 84 44.0
Thhalv10005175m.g Eutrema salsugineum HOM05D007326 ORTHO05D009048 1.5e-08 63.2 32 84.4
vmacro06547 Vaccinium macrocarpon HOM05D007326 ORTHO05D009048 1.5e-08 63.2 102 40.2
Actinidia06153 Actinidia chinensis HOM05D003276 ORTHO05D003809 1.9e-08 62.8 59 52.5
Duzib205G1092 Durio zibethinus HOM05D007326 ORTHO05D009048 1.9e-08 62.8 81 42.0
AT5G67490 Arabidopsis thaliana HOM05D007326 ORTHO05D009048 2.5e-08 62.4 32 84.4
BcaB02g09919 Brassica carinata HOM05D007326 ORTHO05D009048 2.5e-08 62.4 32 84.4
Carub.0008s2698 Capsella rubella HOM05D007326 ORTHO05D009048 2.5e-08 62.4 32 84.4
CARHR280100 Cardamine hirsuta HOM05D007326 ORTHO05D009048 2.5e-08 62.4 32 84.4
Lsat_1_v5_gn_9_58181 Lactuca sativa HOM05D007326 ORTHO05D009048 3.2e-08 62.0 85 45.9
Manes.06G159200 Manihot esculenta HOM05D007326 ORTHO05D009048 3.2e-08 62.0 83 47.0
Nitab4.5_0000714g0090 Nicotiana tabacum HOM05D007326 ORTHO05D009048 3.2e-08 62.0 103 41.7
Lj1g0012737 Lotus japonicus HOM05D007326 ORTHO05D009048 4.2e-08 61.6 78 48.7
ATR0037G036 Amborella trichopoda HOM05D007326 ORTHO05D009048 5.5e-08 61.2 73 50.7
Phvul.004G162900 Phaseolus vulgaris HOM05D007326 ORTHO05D009048 5.5e-08 61.2 30 83.3
QL09p009621 Quercus lobata HOM05D007326 ORTHO05D009048 5.5e-08 61.2 42 64.3
unitig_8.g3560 Utricularia gibba HOM05D000146 ORTHO05D000178 5.5e-08 61.2 81 42.0
CANSAT21G2203 Cannabis sativa HOM05D007326 ORTHO05D009048 7.2e-08 60.8 32 78.1
Cpa.g.sc3.64 Carica papaya HOM05D007326 ORTHO05D009048 7.2e-08 60.8 32 81.2
Nitab4.5_0000714g0080 Nicotiana tabacum HOM05D001433 ORTHO05D009048 7.2e-08 60.8 101 41.6
Haze_14278 Corylus avellana HOM05D007326 ORTHO05D009048 9.4e-08 60.5 77 44.2
Hma1.2p1_0538F.1_g174400 Hydrangea macrophylla HOM05D007326 ORTHO05D009048 9.4e-08 60.5 88 40.9
Sc03g0007330 Simmondsia chinensis HOM05D007326 ORTHO05D009048 9.4e-08 60.5 102 38.2
Sopen03g023220 Solanum pennellii HOM05D007326 ORTHO05D009048 9.4e-08 60.5 98 41.8
ClCG01G000490 Citrullus lanatus HOM05D007326 ORTHO05D009048 1.2e-07 60.1 81 43.2
ATR0762G055 Amborella trichopoda HOM05D007326 ORTHO05D009048 1.6e-07 59.7 76 46.1
Thecc.03G195600 Theobroma cacao HOM05D007326 ORTHO05D009048 1.6e-07 59.7 82 43.9
TPR.G1327 Trifolium pratense HOM05D007326 ORTHO05D009048 1.6e-07 59.7 82 41.5
MELO3C005879.2 Cucumis melo HOM05D007326 ORTHO05D009048 2.7e-07 58.9 81 43.2
TWI23G0901 Tripterygium wilfordii HOM05D007326 ORTHO05D009048 2.7e-07 58.9 102 45.1
A06p32910 Brassica napus HOM05D007326 ORTHO05D009048 3.6e-07 58.5 74 45.9
BraA06t26223Z Brassica rapa HOM05D007326 ORTHO05D009048 3.6e-07 58.5 74 45.9
AUR62010038 Chenopodium quinoa HOM05D007326 ORTHO05D009048 3.6e-07 58.5 76 43.4
Mapoly0007s0050 Marchantia polymorpha HOM05D007326 ORTHO05D009048 3.6e-07 58.5 92 41.3
Sp2g29160 Schrenkiella parvula HOM05D007326 ORTHO05D009048 3.6e-07 58.5 72 45.8
C03p59560 Brassica napus HOM05D007326 ORTHO05D009048 6.1e-07 57.8 71 46.5
BolC3t18219H Brassica oleracea HOM05D007326 ORTHO05D009048 6.1e-07 57.8 71 46.5
Oeu030278.1 Olea europaea HOM05D007326 ORTHO05D009048 6.1e-07 57.8 75 44.0
FAN06G2911 Fragaria x ananassa HOM05D007326 ORTHO05D009048 1.4e-06 56.6 102 33.3
CsaV3_5G000570 Cucumis sativus L. HOM05D007326 ORTHO05D009048 2.3e-06 55.8 96 38.5
MCO04G224 Micromonas commoda HOM05D007326 ORTHO05D009048 2.3e-06 55.8 71 53.5
FAN03G0879 Fragaria x ananassa HOM05D007326 ORTHO05D009048 5.2e-06 54.7 96 34.4
CiPaw.06G009800 Carya illinoinensis HOM05D007326 ORTHO05D009048 6.7e-06 54.3 86 38.4
PRCOL_00002099 Prasinoderma coloniale HOM05D007326 ORTHO05D009048 6.7e-06 54.3 31 71.0
RcHm_v2.0_Chr1g0381021 Rosa chinensis HOM05D007326 ORTHO05D009048 6.7e-06 54.3 66 45.5


User provided reference genes

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