Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0657 Trochodendron aralioides HOM05D003602 ORTHO05D004808 6.0e-52 207.2 104 100.0
TAR371G1016 Trochodendron aralioides HOM05D003602 ORTHO05D004808 8.4e-46 186.8 104 87.5
Nn1g00272 Nelumbo nucifera HOM05D003602 ORTHO05D004808 3.1e-40 168.3 104 77.9
CiPaw.01G077200 Carya illinoinensis HOM05D003602 ORTHO05D004808 4.0e-40 167.9 104 76.0
Gohir.A07G137000 Gossypium hirsutum HOM05D003602 ORTHO05D004808 5.3e-40 167.5 104 77.9
Manes.01G245400 Manihot esculenta HOM05D003602 ORTHO05D004808 5.3e-40 167.5 104 76.9
TWI59G0599 Tripterygium wilfordii HOM05D003602 ORTHO05D004808 9.0e-40 166.8 104 74.0
Duzib138G1559 Durio zibethinus HOM05D003602 ORTHO05D004808 1.2e-39 166.4 103 76.7
Cfa003788 Carpinus fangiana HOM05D003602 ORTHO05D004808 2.6e-39 165.2 104 74.0
Thecc.01G340800 Theobroma cacao HOM05D003602 ORTHO05D004808 4.5e-39 164.5 104 76.0
Gohir.D07G142200 Gossypium hirsutum HOM05D003602 ORTHO05D004808 7.6e-39 163.7 104 76.0
Gorai.001G154000 Gossypium raimondii HOM05D003602 ORTHO05D004808 7.6e-39 163.7 104 76.0
Sabra14G0073400 Salix brachista HOM05D003602 ORTHO05D004808 7.6e-39 163.7 104 76.9
Hma1.2p1_0390F.1_g142640 Hydrangea macrophylla HOM05D003602 ORTHO05D004808 1.3e-38 162.9 104 76.0
Manes.05G021800 Manihot esculenta HOM05D003602 ORTHO05D004808 1.3e-38 162.9 104 76.0
QL08p045638 Quercus lobata HOM05D003602 ORTHO05D004808 1.3e-38 162.9 103 76.7
Ciclev10018709m.g Citrus clementina HOM05D003602 ORTHO05D004808 1.7e-38 162.5 104 74.0
Haze_15672 Corylus avellana HOM05D003602 ORTHO05D004808 1.7e-38 162.5 104 74.0
Lj7P499T29 Lonicera japonica HOM05D003602 ORTHO05D004808 2.9e-38 161.8 104 76.9
PGR042G2389 Punica granatum HOM05D003602 ORTHO05D004808 3.8e-38 161.4 104 75.0
Dinv34217 Davidia involucrata HOM05D003602 ORTHO05D004808 4.9e-38 161.0 104 76.9
arahy.Tifrunner.gnm1.ann1.100NT6 Arachis hypogaea HOM05D003602 ORTHO05D004808 6.4e-38 160.6 104 72.1
arahy.Tifrunner.gnm1.ann1.M38EY0 Arachis hypogaea HOM05D003602 ORTHO05D004808 6.4e-38 160.6 104 72.1
Prupe.2G190300 Prunus persica HOM05D003602 ORTHO05D004808 6.4e-38 160.6 104 75.0
CsaV3_3G007970 Cucumis sativus L. HOM05D003602 ORTHO05D004808 1.1e-37 159.8 104 71.2
Phvul.006G114200 Phaseolus vulgaris HOM05D003602 ORTHO05D004808 1.1e-37 159.8 104 72.1
QL11p045606 Quercus lobata HOM05D003602 ORTHO05D004808 1.1e-37 159.8 103 75.7
MELO3C006015.2 Cucumis melo HOM05D003602 ORTHO05D004808 1.4e-37 159.5 104 70.2
Actinidia17298 Actinidia chinensis HOM05D003602 ORTHO05D004808 1.9e-37 159.1 104 74.0
Duzib133G0673 Durio zibethinus HOM05D003602 ORTHO05D004808 1.9e-37 159.1 104 73.1
Sed0018077 Sechium edule HOM05D003602 ORTHO05D004808 1.9e-37 159.1 104 70.2
Potri.002G172700 Populus trichocarpa HOM05D003602 ORTHO05D004808 2.4e-37 158.7 104 73.1
Potri.014G100000 Populus trichocarpa HOM05D003602 ORTHO05D004808 3.2e-37 158.3 104 74.0
VMungo0540G0473 Vigna mungo HOM05D003602 ORTHO05D004808 3.2e-37 158.3 104 72.1
Eucgr.D02383 Eucalyptus grandis HOM05D003602 ORTHO05D004808 5.4e-37 157.5 104 71.2
PSO135G0828 Papaver somniferum HOM05D003602 ORTHO05D004808 5.4e-37 157.5 104 71.2
Sed0022447 Sechium edule HOM05D003602 ORTHO05D004808 7.1e-37 157.1 104 69.2
CANSAT56G2221 Cannabis sativa HOM05D003602 ORTHO05D004808 9.3e-37 156.8 104 70.2
Sabra02G0140500 Salix brachista HOM05D003602 ORTHO05D004808 9.3e-37 156.8 104 72.1
Cpa.g.sc18.79 Carica papaya HOM05D003602 ORTHO05D004808 1.2e-36 156.4 104 73.1
Oeu043228.1 Olea europaea HOM05D003602 ORTHO05D004808 1.6e-36 156.0 104 73.1
DCAR_008665 Daucus carota HOM05D003602 ORTHO05D004808 2.1e-36 155.6 104 70.2
PSO384G3294 Papaver somniferum HOM05D003602 ORTHO05D004808 2.1e-36 155.6 104 70.2
Aqoxy7G00067 Aquilegia oxysepala HOM05D003602 ORTHO05D004808 2.7e-36 155.2 104 70.2
SGA_v2.0_scaffold22G09976 Striga asiatica HOM05D003602 ORTHO05D004808 2.7e-36 155.2 104 73.1
vmacro07844 Vaccinium macrocarpon HOM05D003602 ORTHO05D004808 2.7e-36 155.2 104 71.2
THA.LOC104817368 Tarenaya hassleriana HOM05D003602 ORTHO05D004808 3.5e-36 154.8 104 71.2
CSS0032390 Camellia sinensis var. sinensis HOM05D003602 ORTHO05D004808 4.6e-36 154.5 104 71.2
Lj3g0012795 Lotus japonicus HOM05D003602 ORTHO05D004808 4.6e-36 154.5 104 68.3
Lalb_Chr17g0342751 Lupinus albus HOM05D003602 ORTHO05D004808 6.0e-36 154.1 102 68.6
VMungo0540G0209 Vigna mungo HOM05D003602 ORTHO05D004808 6.0e-36 154.1 104 70.2
PGSC0003DMG401000117 Solanum tuberosum HOM05D003602 ORTHO05D004808 7.9e-36 153.7 104 71.2
Glyma.07G054900 Glycine max HOM05D003602 ORTHO05D004808 1.8e-35 152.5 104 69.2
Solyc01g096060.4 Solanum lycopersicum HOM05D003602 ORTHO05D004808 1.8e-35 152.5 104 69.2
Lalb_Chr04g0254381 Lupinus albus HOM05D003602 ORTHO05D004808 2.3e-35 152.1 104 69.2
Oeu007881.3 Olea europaea HOM05D003602 ORTHO05D004808 2.3e-35 152.1 104 71.2
Sopen01g039780 Solanum pennellii HOM05D003602 ORTHO05D004808 2.3e-35 152.1 104 69.2
SGA_v2.0_scaffold22G09979 Striga asiatica HOM05D003602 ORTHO05D004808 3.0e-35 151.8 102 71.6
Glyma.16G023700 Glycine max HOM05D003602 ORTHO05D004808 3.9e-35 151.4 104 68.3
CAN.G1415.23 Capsicum annuum HOM05D003602 ORTHO05D004808 5.1e-35 151.0 104 69.2
Phvul.006G114111 Phaseolus vulgaris HOM05D003602 ORTHO05D004808 5.1e-35 151.0 104 68.3
Rhsim03G0025100 Rhododendron simsii HOM05D003602 ORTHO05D004808 5.1e-35 151.0 104 71.2
MSTRG.17352 Avicennia marina HOM05D003602 ORTHO05D004808 6.7e-35 150.6 104 70.2
ClCG05G000750 Citrullus lanatus HOM05D003602 ORTHO05D004808 6.7e-35 150.6 104 66.3
Peaxi162Scf00345g00023 Petunia axillaris HOM05D003602 ORTHO05D004808 6.7e-35 150.6 104 70.2
Migut.N01537 Erythranthe guttata HOM05D003602 ORTHO05D004808 3.3e-34 148.3 104 70.2
Nitab4.5_0001763g0060 Nicotiana tabacum HOM05D003602 ORTHO05D004808 3.3e-34 148.3 104 69.2
CAN.G1045.28 Capsicum annuum HOM05D003602 ORTHO05D004808 1.3e-33 146.4 104 69.2
Cc02_g39500 Coffea canephora HOM05D003602 ORTHO05D004808 1.3e-33 146.4 104 66.3
Nitab4.5_0002614g0030 Nicotiana tabacum HOM05D003602 ORTHO05D004808 1.3e-33 146.4 104 67.3
Aa31LG1G27870 Aethionema arabicum HOM05D003602 ORTHO05D004808 1.6e-33 146.0 104 67.3
AL4G45940 Arabidopsis lyrata HOM05D003602 ORTHO05D004808 1.6e-33 146.0 104 66.3
MD01G1083100 Malus domestica HOM05D003602 ORTHO05D004808 1.6e-33 146.0 102 66.7
ATR0605G321 Amborella trichopoda HOM05D003602 ORTHO05D004808 2.1e-33 145.6 104 66.3
COL.COLO4_06273 Corchorus olitorius HOM05D003602 ORTHO05D004808 2.8e-33 145.2 105 68.6
Ca_23524_v3 Cicer arietinum L. HOM05D003602 ORTHO05D004808 3.7e-33 144.8 104 64.4
CARHR141850 Cardamine hirsuta HOM05D003602 ORTHO05D004808 4.8e-33 144.4 104 64.4
AT2G46520 Arabidopsis thaliana HOM05D003602 ORTHO05D004808 6.2e-33 144.1 104 64.4
RcHm_v2.0_Chr1g0360031 Rosa chinensis HOM05D003602 ORTHO05D004808 6.2e-33 144.1 104 64.4
Carub.0004s2923 Capsella rubella HOM05D003602 ORTHO05D004808 8.1e-33 143.7 104 64.4
Sp4g28560 Schrenkiella parvula HOM05D003602 ORTHO05D004808 1.4e-32 142.9 104 65.4
Thhalv10001293m.g Eutrema salsugineum HOM05D003602 ORTHO05D004808 5.3e-32 141.0 103 65.0
SEGI_02600 Sequoiadendron giganteum HOM05D003602 ORTHO05D004808 5.3e-32 141.0 104 63.5
C04p01410 Brassica napus HOM05D003602 ORTHO05D004808 1.5e-31 139.4 104 65.4
BolC4t21795H Brassica oleracea HOM05D003602 ORTHO05D004808 1.5e-31 139.4 104 65.4
CARHR193560 Cardamine hirsuta HOM05D003602 ORTHO05D004808 2.0e-31 139.0 104 64.4
Medtr8g027450 Medicago truncatula HOM05D003602 ORTHO05D004808 2.0e-31 139.0 104 63.5
A05p01280 Brassica napus HOM05D003602 ORTHO05D004808 3.4e-31 138.3 104 63.5
BraA05t19126Z Brassica rapa HOM05D003602 ORTHO05D004808 3.4e-31 138.3 104 63.5
FvH4_7g16830 Fragaria vesca HOM05D003602 ORTHO05D004808 3.4e-31 138.3 104 61.5
FAN01G1925 Fragaria x ananassa HOM05D003602 ORTHO05D004808 3.4e-31 138.3 104 61.5
FAN06G1715 Fragaria x ananassa HOM05D003602 ORTHO05D004808 3.4e-31 138.3 104 61.5
FAN06G4341 Fragaria x ananassa HOM05D003602 ORTHO05D004808 3.4e-31 138.3 104 61.5
FAN10G2704 Fragaria x ananassa HOM05D003602 ORTHO05D004808 3.4e-31 138.3 104 61.5
FAN10G3025 Fragaria x ananassa HOM05D003602 ORTHO05D004808 3.4e-31 138.3 104 61.5
FAN03G2718 Fragaria x ananassa HOM05D003602 ORTHO05D004808 1.3e-30 136.3 104 59.6
HanXRQChr04g0120491 Helianthus annuus HOM05D003602 ORTHO05D004808 1.3e-30 136.3 102 63.7
BcaC02g12682 Brassica carinata HOM05D003602 ORTHO05D004808 1.7e-30 136.0 104 65.4
unitig_736.g22809 Utricularia gibba HOM05D003602 ORTHO05D004808 4.9e-30 134.4 104 66.3
TPR.G20226 Trifolium pratense HOM05D003602 ORTHO05D004808 6.5e-30 134.0 104 59.6
Sc02g0002440 Simmondsia chinensis HOM05D003602 ORTHO05D004808 1.4e-29 132.9 96 67.7
Sc02g0002490 Simmondsia chinensis HOM05D003602 ORTHO05D004808 1.4e-29 132.9 96 67.7
Lsat_1_v5_gn_7_961 Lactuca sativa HOM05D003602 ORTHO05D004808 4.6e-28 127.9 105 61.0
Hund27357 Selenicereus undatus HOM05D003602 ORTHO05D004808 7.9e-28 127.1 96 63.5
SHI11330 Sapria himalayana HOM05D003602 ORTHO05D004808 1.3e-27 126.3 104 59.6
ECA236G0047 Erigeron canadensis HOM05D003602 ORTHO05D004808 1.8e-27 125.9 104 59.6
SalBow3G0266 Salvia bowleyana HOM05D003602 ORTHO05D004808 1.8e-27 125.9 103 62.1
BcaC03g13954 Brassica carinata HOM05D003602 ORTHO05D004808 2.3e-27 125.6 105 58.1
AUR62020311 Chenopodium quinoa HOM05D003602 ORTHO05D004808 5.1e-27 124.4 96 61.5
Mapoly0156s0024 Marchantia polymorpha HOM05D003602 ORTHO05D004808 2.5e-26 122.1 98 55.1
EL10Ac8g18571 Beta vulgaris HOM05D003602 ORTHO05D004808 4.3e-26 121.3 96 59.4
Dinv32601 Davidia involucrata HOM05D003602 ORTHO05D004808 7.4e-26 120.6 73 80.8
HPP92_002938 Vanilla planifolia HOM05D003602 ORTHO05D004808 1.3e-25 119.8 104 54.8
Lj9C388T18 Lonicera japonica HOM05D003602 ORTHO05D020334 2.1e-25 119.0 100 64.0
Carub.0001s3638 Capsella rubella HOM05D003602 ORTHO05D004808 3.7e-25 118.2 106 57.5
A02p08760 Brassica napus HOM05D003602 ORTHO05D004808 6.2e-25 117.5 104 54.8
SalBow2G0371 Salvia bowleyana HOM05D003602 ORTHO05D004808 6.2e-25 117.5 105 57.1
EL10Ac6g13271 Beta vulgaris HOM05D003602 ORTHO05D004808 1.4e-24 116.3 96 58.3
Ah.03g136880 Amaranthus hybridus HOM05D003602 ORTHO05D004808 2.4e-24 115.5 95 57.9
Ah.14g081150 Amaranthus hybridus HOM05D003602 ORTHO05D004808 2.4e-24 115.5 95 57.9
ECA247G2319 Erigeron canadensis HOM05D003602 ORTHO05D020334 3.1e-24 115.2 105 55.2
BraA02t05946Z Brassica rapa HOM05D003602 ORTHO05D004808 4.1e-24 114.8 104 54.8
Actinidia39220 Actinidia chinensis HOM05D003602 ORTHO05D004808 1.7e-22 109.4 73 71.2
FAN22G1715 Fragaria x ananassa HOM05D003602 ORTHO05D020334 2.2e-22 109.0 92 55.4
CARHR195690 Cardamine hirsuta HOM05D003602 ORTHO05D004808 2.9e-22 108.6 80 63.8
SMO364G0669 Selaginella moellendorffii HOM05D003602 ORTHO05D004808 5.0e-22 107.8 104 48.1
Os01g0235400 Oryza sativa ssp. japonica HOM05D003602 ORTHO05D004808 1.0e-19 100.1 107 47.7
BcaB03g13365 Brassica carinata HOM05D003602 ORTHO05D004808 3.9e-19 98.2 95 53.7
Zm00001eb055080 Zea mays HOM05D003602 ORTHO05D004808 3.9e-19 98.2 107 45.8
Aqoxy4G00207 Aquilegia oxysepala HOM05D003602 ORTHO05D004808 1.1e-18 96.7 76 63.2
Pp3c16_3270 Physcomitrium patens HOM05D003602 ORTHO05D004808 1.5e-18 96.3 98 45.9
Pp3c27_3380 Physcomitrium patens HOM05D003602 ORTHO05D004808 3.3e-18 95.1 96 45.8
Zm00001eb216140 Zea mays HOM05D003602 ORTHO05D004808 2.8e-17 92.0 108 43.5
AagrBONN_evm.TU.Sc2ySwM_368.663 Anthoceros agrestis HOM05D003602 ORTHO05D004808 4.1e-16 88.2 77 50.6
FAN17G1901 Fragaria x ananassa HOM05D003602 ORTHO05D020334 2.2e-14 82.4 67 56.7
CBR_g50023 Chara braunii HOM05D003602 ORTHO05D004808 6.1e-12 74.3 109 37.6
CARHR124510 Cardamine hirsuta HOM05D003602 ORTHO05D020334 3.9e-11 71.6 67 53.7
Lsat_1_v5_gn_2_118360 Lactuca sativa HOM05D003602 ORTHO05D020334 6.7e-11 70.9 72 52.8
VMungo1309G3028 Vigna mungo HOM05D024188 ORTHO05D008631 2.4e-08 62.4 43 67.4
MCO04G210 Micromonas commoda HOM05D003602 ORTHO05D004808 6.9e-08 60.8 99 32.3
SMO358G0230 Selaginella moellendorffii HOM05D003602 ORTHO05D004808 1.5e-07 59.7 65 44.6


User provided reference genes

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