Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 0.0e+00 1182.5 632 100.0
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 1.2e-235 820.1 629 68.0
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 1.0e-226 790.4 631 66.9
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 1.4e-220 770.0 635 62.8
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 1.4e-220 770.0 639 61.7
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 1.4e-220 770.0 628 64.0
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 1.7e-218 763.1 627 63.0
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 3.2e-217 758.8 628 63.2
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 5.5e-217 758.1 638 62.2
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 6.1e-216 754.6 630 62.9
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 6.8e-215 751.1 636 64.3
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 4.9e-213 745.0 629 60.7
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 6.3e-213 744.6 639 62.4
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 8.3e-213 744.2 636 67.3
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 1.1e-212 743.8 636 65.1
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 1.4e-212 743.4 640 61.2
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 7.8e-211 737.6 627 62.2
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 1.5e-209 733.4 632 61.9
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 1.9e-209 733.0 639 61.7
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.2e-208 730.3 640 61.2
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 2.8e-208 729.2 646 61.9
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 3.6e-208 728.8 642 61.2
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 8.0e-208 727.6 640 60.9
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 1.4e-207 726.9 636 61.9
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 1.4e-207 726.9 629 63.6
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 5.2e-207 724.9 637 64.2
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 9.8e-206 720.7 630 64.4
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 1.7e-205 719.9 633 60.8
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 8.3e-205 717.6 620 62.4
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 1.1e-204 717.2 638 64.1
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 4.1e-204 715.3 626 62.5
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 4.1e-204 715.3 627 62.7
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 4.1e-204 715.3 634 60.7
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 9.2e-204 714.1 626 62.3
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 1.6e-203 713.4 623 63.2
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 2.7e-203 712.6 638 61.4
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 5.9e-203 711.4 632 62.5
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 3.9e-202 708.8 666 59.0
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 3.3e-201 705.7 630 62.9
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 7.3e-201 704.5 626 61.8
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 7.3e-201 704.5 625 61.6
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 4.7e-200 701.8 641 60.7
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 1.1e-199 700.7 638 60.3
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 1.4e-199 700.3 630 60.5
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 4.0e-199 698.7 626 63.3
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 8.9e-199 697.6 633 64.8
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 2.0e-198 696.4 635 60.9
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 2.0e-198 696.4 620 61.5
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 3.4e-198 695.7 620 61.6
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 3.7e-197 692.2 647 60.3
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 6.4e-197 691.4 632 57.9
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 8.3e-197 691.0 651 59.1
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 5.4e-196 688.3 651 58.2
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 1.3e-194 683.7 635 59.7
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 1.7e-194 683.3 640 59.2
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 3.0e-194 682.6 659 58.9
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 8.6e-194 681.0 541 68.4
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 1.5e-193 680.2 502 67.9
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 3.3e-193 679.1 647 59.2
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 3.3e-193 679.1 655 57.6
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 1.1e-191 674.1 646 58.7
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 1.1e-191 674.1 635 58.4
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 1.4e-191 673.7 648 58.3
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 2.3e-191 672.9 602 59.0
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 3.1e-191 672.5 646 58.2
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 5.2e-191 671.8 637 61.7
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 1.5e-190 670.2 612 62.9
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 2.0e-190 669.8 637 58.6
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 1.9e-188 663.3 630 59.4
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 5.4e-188 661.8 642 55.0
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 1.6e-187 660.2 432 73.1
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 4.6e-187 658.7 637 56.8
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 2.3e-186 656.4 632 57.8
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 1.9e-185 653.3 633 57.3
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 1.9e-185 653.3 566 65.5
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 3.3e-185 652.5 646 54.2
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 4.3e-185 652.1 644 56.5
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 4.3e-185 652.1 620 55.2
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 7.3e-185 651.4 656 55.2
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 1.2e-184 650.6 626 59.9
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 1.6e-184 650.2 643 55.4
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 3.6e-184 649.0 644 55.6
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 3.6e-184 649.0 644 55.6
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 6.2e-184 648.3 647 55.0
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 2.6e-182 642.9 643 54.9
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 4.9e-181 638.6 595 61.7
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 7.1e-180 634.8 654 56.1
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 7.8e-179 631.3 642 54.2
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 1.3e-178 630.6 672 53.1
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 9.6e-177 624.4 639 52.6
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 1.2e-174 617.5 650 54.6
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 4.0e-167 592.4 631 52.8
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 5.8e-166 588.6 645 53.6
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 2.1e-160 570.1 622 51.1
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 3.4e-150 536.2 643 49.0
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 3.8e-149 532.7 568 51.6
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 1.1e-148 531.2 567 53.1
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 1.1e-148 531.2 435 62.5
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 1.4e-143 514.2 352 66.2
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 8.8e-138 495.0 441 65.3
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 2.9e-101 373.6 361 56.2
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 6.1e-99 365.9 358 62.0
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 6.4e-80 302.8 560 34.6
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 1.2e-46 192.2 490 32.7
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 1.3e-45 188.7 380 33.2
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 3.0e-45 187.6 274 37.6
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 1.5e-44 185.3 274 37.6
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 2.0e-41 174.9 240 36.2
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 5.6e-36 156.8 99 73.7
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 1.0e-32 146.0 82 87.8
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 4.9e-32 143.7 90 68.9
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.0e-24 119.4 83 71.1
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 1.4e-23 115.5 114 59.6
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 8.8e-21 106.3 58 79.3
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 4.8e-19 100.5 161 33.5
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 4.1e-18 97.4 74 63.5
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 4.5e-17 94.0 80 61.2
HPP92_015861 Vanilla planifolia HOM05D006614 ORTHO05D008217 8.0e-06 56.6 30 83.3


User provided reference genes

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