Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0593 Trochodendron aralioides HOM05D005535 ORTHO05D006753 7.9e-54 213.8 128 100.0
TAR629G1161 Trochodendron aralioides HOM05D005535 ORTHO05D006753 7.0e-18 94.4 69 78.3
TAR371G0260 Trochodendron aralioides HOM05D005535 ORTHO05D006753 1.2e-14 83.6 69 69.6
CSS0007804 Camellia sinensis var. sinensis HOM05D005535 ORTHO05D006753 4.4e-12 75.1 69 63.8
GSVIVG01008044001 Vitis vinifera HOM05D005535 ORTHO05D006753 4.4e-12 75.1 68 60.3
QL10p015851 Quercus lobata HOM05D005535 ORTHO05D006753 7.5e-12 74.3 74 56.8
Cfa018977 Carpinus fangiana HOM05D005535 ORTHO05D006753 1.3e-11 73.6 78 55.1
Dinv19929 Davidia involucrata HOM05D005535 ORTHO05D006753 1.7e-11 73.2 68 58.8
Dinv38677 Davidia involucrata HOM05D005535 ORTHO05D006753 2.8e-11 72.4 68 57.4
Ciclev10020848m.g Citrus clementina HOM05D005535 ORTHO05D006753 3.7e-11 72.0 69 60.9
Glyma.06G191000 Glycine max HOM05D005535 ORTHO05D006753 4.8e-11 71.6 67 56.7
CSS0007998 Camellia sinensis var. sinensis HOM05D005535 ORTHO05D006753 3.1e-10 68.9 67 62.7
Hma1.2p1_1617F.1_g293810 Hydrangea macrophylla HOM05D005535 ORTHO05D006753 7.0e-10 67.8 69 58.0
CiPaw.12G015700 Carya illinoinensis HOM05D005535 ORTHO05D006753 9.1e-10 67.4 75 53.3
Prupe.5G188200 Prunus persica HOM05D005535 ORTHO05D006753 1.6e-09 66.6 68 54.4
Glyma.04G173200 Glycine max HOM05D005535 ORTHO05D006753 2.0e-09 66.2 67 53.7
Aqoxy3G00718 Aquilegia oxysepala HOM05D005535 ORTHO05D006753 2.7e-09 65.9 80 63.8
Thecc.03G081300 Theobroma cacao HOM05D005535 ORTHO05D006753 4.5e-09 65.1 68 55.9
RcHm_v2.0_Chr7g0180761 Rosa chinensis HOM05D005535 ORTHO05D006753 5.9e-09 64.7 67 53.7
Haze_07363 Corylus avellana HOM05D005535 ORTHO05D006753 3.8e-08 62.0 61 55.7
Duzib084G1387 Durio zibethinus HOM05D005535 ORTHO05D006753 6.5e-08 61.2 68 55.9
Hma1.2p1_0104F.1_g050150 Hydrangea macrophylla HOM05D005535 ORTHO05D006753 6.5e-08 61.2 67 49.3
Lj4g0008602 Lotus japonicus HOM05D005535 ORTHO05D006753 6.5e-08 61.2 79 50.6
Duzib205G0302 Durio zibethinus HOM05D005535 ORTHO05D006753 8.5e-08 60.8 68 57.4
FvH4_5g15300 Fragaria vesca HOM05D005535 ORTHO05D006753 1.1e-07 60.5 67 52.2
FAN13G1299 Fragaria x ananassa HOM05D005535 ORTHO05D006753 1.1e-07 60.5 67 52.2
PGR083G2381 Punica granatum HOM05D005535 ORTHO05D006753 1.5e-07 60.1 65 58.5
Rhsim08G0158400 Rhododendron simsii HOM05D005535 ORTHO05D006753 1.5e-07 60.1 69 55.1
vmacro16564 Vaccinium macrocarpon HOM05D005535 ORTHO05D006753 1.5e-07 60.1 66 57.6
Rhsim12G0158200 Rhododendron simsii HOM05D005535 ORTHO05D006753 2.5e-07 59.3 69 55.1
Atru.chr9.2302 Acer truncatum HOM05D005535 ORTHO05D006753 3.2e-07 58.9 68 51.5
FAN18G1286 Fragaria x ananassa HOM05D005535 ORTHO05D006753 3.2e-07 58.9 67 50.7
Actinidia37646 Actinidia chinensis HOM05D005535 ORTHO05D006753 4.2e-07 58.5 76 52.6
Eucgr.B00441 Eucalyptus grandis HOM05D005535 ORTHO05D006753 4.2e-07 58.5 67 55.2
Actinidia04914 Actinidia chinensis HOM05D005535 ORTHO05D006753 7.2e-07 57.8 76 47.4
PSO832G1146 Papaver somniferum HOM05D005535 ORTHO05D006753 7.2e-07 57.8 74 52.7
FAN04G1197 Fragaria x ananassa HOM05D005535 ORTHO05D006753 9.4e-07 57.4 67 50.7
FAN08G2745 Fragaria x ananassa HOM05D005535 ORTHO05D006753 9.4e-07 57.4 67 50.7
Phvul.009G189600 Phaseolus vulgaris HOM05D005535 ORTHO05D006753 1.2e-06 57.0 68 55.9
Potri.015G063700 Populus trichocarpa HOM05D005535 ORTHO05D006753 2.1e-06 56.2 71 43.7
Nn3g17153 Nelumbo nucifera HOM05D005535 ORTHO05D006753 2.7e-06 55.8 59 57.6
Sabra15G0089300 Salix brachista HOM05D005535 ORTHO05D006753 2.7e-06 55.8 71 49.3
VMungo1309G2126 Vigna mungo HOM05D005535 ORTHO05D006753 6.1e-06 54.7 48 62.5
MELO3C017158.2 Cucumis melo HOM05D005535 ORTHO05D006753 8.0e-06 54.3 65 47.7


User provided reference genes

Program Settings