Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0591 Trochodendron aralioides HOM05D003513 ORTHO05D004660 9.1e-126 453.8 256 100.0
GSVIVG01036987001 Vitis vinifera HOM05D003513 ORTHO05D004660 6.0e-69 265.0 238 66.8
Actinidia00338 Actinidia chinensis HOM05D003513 ORTHO05D004660 9.5e-67 257.7 236 66.5
vmacro01922 Vaccinium macrocarpon HOM05D003513 ORTHO05D004660 1.6e-66 256.9 238 65.1
MBI18_g12443_MAGBIO Magnolia biondii HOM05D003513 ORTHO05D004660 1.4e-65 253.8 238 62.2
MBI18_g04900_MAGBIO Magnolia biondii HOM05D003513 ORTHO05D004660 1.5e-64 250.4 238 62.2
Actinidia02426 Actinidia chinensis HOM05D003513 ORTHO05D004660 4.4e-64 248.8 214 68.2
Dinv17746 Davidia involucrata HOM05D003513 ORTHO05D004660 7.5e-64 248.1 223 67.3
Rhsim11G0147300 Rhododendron simsii HOM05D003513 ORTHO05D004660 7.5e-64 248.1 261 60.2
Nn4g22684 Nelumbo nucifera HOM05D003513 ORTHO05D004660 8.3e-63 244.6 337 50.1
Lj9A339T51 Lonicera japonica HOM05D003513 ORTHO05D004660 1.6e-61 240.4 215 66.0
CSS0016653 Camellia sinensis var. sinensis HOM05D003513 ORTHO05D004660 2.7e-61 239.6 238 63.0
Hma1.2p1_0661F.1_g197860 Hydrangea macrophylla HOM05D003513 ORTHO05D004660 6.0e-61 238.4 220 63.2
Aqoxy5G03939 Aquilegia oxysepala HOM05D003513 ORTHO05D004660 1.3e-60 237.3 245 58.8
COL.COLO4_17824 Corchorus olitorius HOM05D003513 ORTHO05D004660 2.1e-58 229.9 238 60.9
PSO339G4304 Papaver somniferum HOM05D003513 ORTHO05D004660 2.8e-58 229.6 218 64.2
Cfa003376 Carpinus fangiana HOM05D003513 ORTHO05D004660 6.2e-58 228.4 237 60.3
Ciclev10028868m.g Citrus clementina HOM05D003513 ORTHO05D004660 2.4e-57 226.5 212 65.1
Gohir.A03G213100 Gossypium hirsutum HOM05D003513 ORTHO05D004660 2.4e-57 226.5 235 59.6
Atru.chr4.2879 Acer truncatum HOM05D003513 ORTHO05D004660 3.1e-57 226.1 235 60.9
PGR042G0778 Punica granatum HOM05D003513 ORTHO05D004660 4.0e-57 225.7 223 58.3
Potri.009G082200 Populus trichocarpa HOM05D003513 ORTHO05D004660 6.8e-57 224.9 225 60.9
TWI23G0398 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 6.8e-57 224.9 237 57.0
TWI14G0477 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 1.5e-56 223.8 232 57.8
Duzib248G1448 Durio zibethinus HOM05D003513 ORTHO05D004660 2.0e-56 223.4 236 60.6
PSO384G0236 Papaver somniferum HOM05D003513 ORTHO05D004660 2.6e-56 223.0 245 59.2
Prupe.8G155900 Prunus persica HOM05D003513 ORTHO05D004660 3.4e-56 222.6 221 61.5
Sabra09G0063800 Salix brachista HOM05D003513 ORTHO05D004660 5.8e-56 221.9 225 60.4
ClCG02G003790 Citrullus lanatus HOM05D003513 ORTHO05D004660 7.6e-56 221.5 224 61.2
Duzib052G1139 Durio zibethinus HOM05D003513 ORTHO05D004660 2.2e-55 219.9 226 62.8
FAN15G2646 Fragaria x ananassa HOM05D003513 ORTHO05D004660 3.8e-55 219.2 232 59.5
MELO3C013317.2 Cucumis melo HOM05D003513 ORTHO05D004660 6.4e-55 218.4 225 60.4
Manes.07G049900 Manihot esculenta HOM05D003513 ORTHO05D004660 8.4e-55 218.0 211 62.6
MD05G1110900 Malus domestica HOM05D003513 ORTHO05D004660 1.4e-54 217.2 239 59.8
FAN24G3528 Fragaria x ananassa HOM05D003513 ORTHO05D004660 1.9e-54 216.9 232 59.1
RcHm_v2.0_Chr6g0247131 Rosa chinensis HOM05D003513 ORTHO05D004660 2.4e-54 216.5 228 59.2
Gohir.D02G234600 Gossypium hirsutum HOM05D003513 ORTHO05D004660 3.2e-54 216.1 208 61.1
Gorai.005G262600 Gossypium raimondii HOM05D003513 ORTHO05D004660 4.2e-54 215.7 233 58.8
EL10Ac4g09206 Beta vulgaris HOM05D003513 ORTHO05D004660 5.4e-54 215.3 244 54.1
CsaV3_7G001360 Cucumis sativus L. HOM05D003513 ORTHO05D004660 1.2e-53 214.2 224 59.4
FvH4_2g02710 Fragaria vesca HOM05D003513 ORTHO05D004660 1.2e-53 214.2 232 58.2
Oeu010478.1 Olea europaea HOM05D003513 ORTHO05D004660 1.2e-53 214.2 235 57.4
Thecc.02G033900 Theobroma cacao HOM05D003513 ORTHO05D004660 1.6e-53 213.8 237 57.0
Cc02_g20350 Coffea canephora HOM05D003513 ORTHO05D004660 2.7e-53 213.0 237 56.1
QL11p027784 Quercus lobata HOM05D003513 ORTHO05D004660 2.7e-53 213.0 239 58.2
FAN20G2897 Fragaria x ananassa HOM05D003513 ORTHO05D004660 4.6e-53 212.2 223 60.1
FAN27G0638 Fragaria x ananassa HOM05D003513 ORTHO05D004660 4.6e-53 212.2 223 59.2
Cfa004752 Carpinus fangiana HOM05D003513 ORTHO05D004660 1.7e-52 210.3 220 60.9
MSTRG.8971 Avicennia marina HOM05D003513 ORTHO05D004660 6.6e-52 208.4 236 57.2
Solyc01g106560.4 Solanum lycopersicum HOM05D003513 ORTHO05D004660 1.9e-51 206.8 243 55.6
Sopen01g048910 Solanum pennellii HOM05D003513 ORTHO05D004660 1.9e-51 206.8 238 55.5
Lsat_1_v5_gn_7_84220 Lactuca sativa HOM05D003513 ORTHO05D004660 4.3e-51 205.7 235 55.3
MSTRG.8970 Avicennia marina HOM05D003513 ORTHO05D004660 5.6e-51 205.3 235 56.6
Oeu059873.1 Olea europaea HOM05D003513 ORTHO05D004660 1.2e-50 204.1 236 55.1
Potri.001G287900 Populus trichocarpa HOM05D003513 ORTHO05D004660 1.2e-50 204.1 239 56.1
Peaxi162Scf00016g03328 Petunia axillaris HOM05D003513 ORTHO05D004660 1.6e-50 203.8 229 57.2
PGSC0003DMG400005104 Solanum tuberosum HOM05D003513 ORTHO05D004660 1.6e-50 203.8 244 54.9
ECA236G2279 Erigeron canadensis HOM05D003513 ORTHO05D004660 4.7e-50 202.2 237 54.9
SGA_v2.0_scaffold32G12967 Striga asiatica HOM05D003513 ORTHO05D004660 4.7e-50 202.2 213 55.9
CANSAT11G1387 Cannabis sativa HOM05D003513 ORTHO05D004660 8.1e-50 201.4 214 57.9
SalBow6G6243 Salvia bowleyana HOM05D003513 ORTHO05D004660 2.4e-49 199.9 234 54.3
Medtr2g010510 Medicago truncatula HOM05D003513 ORTHO05D004660 3.1e-49 199.5 227 54.2
CiPaw.16G055200 Carya illinoinensis HOM05D003513 ORTHO05D004660 4.0e-49 199.1 235 57.0
Eucgr.I02512 Eucalyptus grandis HOM05D003513 ORTHO05D004660 6.9e-49 198.4 214 57.9
Os07g0213400 Oryza sativa ssp. japonica HOM05D003513 ORTHO05D004660 2.0e-48 196.8 239 49.4
Lalb_Chr18g0060191 Lupinus albus HOM05D003513 ORTHO05D004660 4.4e-48 195.7 279 44.8
Ca_00197_v3 Cicer arietinum L. HOM05D000871 ORTHO05D000770 9.9e-48 194.5 209 56.9
arahy.Tifrunner.gnm1.ann1.K4QFJX Arachis hypogaea HOM05D003513 ORTHO05D004660 1.7e-47 193.7 266 47.4
Dinv03362 Davidia involucrata HOM05D003513 ORTHO05D004660 1.7e-47 193.7 151 72.8
Lj1g0004946 Lotus japonicus HOM05D003513 ORTHO05D004660 2.2e-47 193.4 237 54.0
arahy.Tifrunner.gnm1.ann1.SQB86K Arachis hypogaea HOM05D003513 ORTHO05D004660 1.9e-46 190.3 266 47.0
Sed0007617 Sechium edule HOM05D003513 ORTHO05D004660 1.9e-46 190.3 215 55.3
arahy.Tifrunner.gnm1.ann1.2E8PRH Arachis hypogaea HOM05D003513 ORTHO05D004660 2.4e-46 189.9 266 47.7
CiPaw.05G024600 Carya illinoinensis HOM05D003513 ORTHO05D004660 4.2e-46 189.1 239 54.4
THA.LOC104807196 Tarenaya hassleriana HOM05D003513 ORTHO05D004660 9.3e-46 188.0 203 57.1
Sabra16G0180200 Salix brachista HOM05D003513 ORTHO05D004660 2.7e-45 186.4 259 49.8
Sp3g05980 Schrenkiella parvula HOM05D003513 ORTHO05D004660 2.7e-45 186.4 240 51.7
Glyma.15G062000 Glycine max HOM05D003513 ORTHO05D004660 4.6e-45 185.7 259 49.4
CDE07G1727 Ceratophyllum demersum HOM05D003513 ORTHO05D004660 6.0e-45 185.3 256 47.3
unitig_0.g631 Utricularia gibba HOM05D003513 ORTHO05D004660 7.8e-45 184.9 209 53.6
Aa31LG8G12720 Aethionema arabicum HOM05D003513 ORTHO05D004660 1.0e-44 184.5 236 49.6
arahy.Tifrunner.gnm1.ann1.C4ZNB5 Arachis hypogaea HOM05D003513 ORTHO05D004660 1.0e-44 184.5 274 46.7
Lj6g0027000 Lotus japonicus HOM05D003513 ORTHO05D004660 1.0e-44 184.5 249 50.2
Zm00001eb325060 Zea mays HOM05D003513 ORTHO05D004660 1.0e-44 184.5 238 50.4
DCAR_029853 Daucus carota HOM05D003513 ORTHO05D004660 1.3e-44 184.1 241 50.2
Glyma.13G253000 Glycine max HOM05D003513 ORTHO05D004660 1.3e-44 184.1 265 47.9
Psat1g212080 Pisum sativum HOM05D003513 ORTHO05D004660 1.7e-44 183.7 177 58.2
VMungo0540G2261 Vigna mungo HOM05D003513 ORTHO05D004660 3.0e-44 183.0 249 49.0
MD10G1114400 Malus domestica HOM05D003513 ORTHO05D004660 8.7e-44 181.4 212 55.2
SHI04900 Sapria himalayana HOM05D003513 ORTHO05D004660 8.7e-44 181.4 194 55.2
ATR0681G195 Amborella trichopoda HOM05D003513 ORTHO05D004660 4.3e-43 179.1 256 46.1
TAR629G2534 Trochodendron aralioides HOM05D003513 ORTHO05D004660 9.6e-43 177.9 117 87.2
SEGI_16177 Sequoiadendron giganteum HOM05D003513 ORTHO05D004660 2.1e-42 176.8 278 43.2
Lj6g0027758 Lotus japonicus HOM05D003513 ORTHO05D004660 3.6e-42 176.0 215 52.6
AL3G45960 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 4.8e-42 175.6 236 47.9
CDE04G2077 Ceratophyllum demersum HOM05D000016 ORTHO05D000538 4.0e-41 172.6 194 52.1
HanXRQChr17g0550541 Helianthus annuus HOM05D003513 ORTHO05D004660 4.0e-41 172.6 202 52.0
Carub.0003s2847 Capsella rubella HOM05D003513 ORTHO05D004660 2.0e-40 170.2 212 50.5
Atru.chr5.2163 Acer truncatum HOM05D003513 ORTHO05D004660 4.5e-40 169.1 151 66.9
AL7G17790 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 5.8e-40 168.7 228 50.0
HPP92_011751 Vanilla planifolia HOM05D003513 ORTHO05D004660 2.2e-39 166.8 215 50.7
C03p42610 Brassica napus HOM05D003513 ORTHO05D004660 2.9e-39 166.4 237 47.3
AUR62005013 Chenopodium quinoa HOM05D003513 ORTHO05D004660 8.4e-39 164.9 212 50.5
Mapoly0037s0029 Marchantia polymorpha HOM05D003513 ORTHO05D004660 4.2e-38 162.5 226 48.7
Cpa.g.sc20.72 Carica papaya HOM05D003513 ORTHO05D004660 2.7e-37 159.8 151 62.3
Sp7g31420 Schrenkiella parvula HOM05D003513 ORTHO05D004660 2.7e-37 159.8 225 47.6
SEGI_38183 Sequoiadendron giganteum HOM05D003513 ORTHO05D004660 1.3e-36 157.5 230 44.3
BraA01t00446Z Brassica rapa HOM05D003513 ORTHO05D004660 2.3e-36 156.8 228 46.5
BcaB07g32937 Brassica carinata HOM05D003513 ORTHO05D004660 3.9e-36 156.0 190 51.1
A03p35030 Brassica napus HOM05D003513 ORTHO05D004660 3.3e-35 152.9 237 44.3
AT4G33690 Arabidopsis thaliana HOM05D003513 ORTHO05D004660 5.6e-35 152.1 200 48.5
BolC3t16531H Brassica oleracea HOM05D003513 ORTHO05D004660 7.4e-35 151.8 255 41.2
BcaC09g52179 Brassica carinata HOM05D003513 ORTHO05D004660 1.3e-34 151.0 225 45.8
BolC1t00484H Brassica oleracea HOM05D003513 ORTHO05D004660 1.3e-34 151.0 225 45.8
BraA03t12683Z Brassica rapa HOM05D003513 ORTHO05D004660 1.6e-34 150.6 236 43.2
C01p05020 Brassica napus HOM05D003513 ORTHO05D004660 2.8e-34 149.8 225 45.8
AUR62000955 Chenopodium quinoa HOM05D003513 ORTHO05D004660 8.1e-34 148.3 212 45.8
SMO119G0189 Selaginella moellendorffii HOM05D003513 ORTHO05D004660 3.1e-33 146.4 223 41.7
Nitab4.5_0001477g0150 Nicotiana tabacum HOM05D003513 ORTHO05D004660 6.9e-33 145.2 242 46.7
A01p04630 Brassica napus HOM05D003513 ORTHO05D004660 1.2e-32 144.4 228 43.9
Pp3c17_21630 Physcomitrium patens HOM05D003513 ORTHO05D004660 3.4e-32 142.9 236 42.8
AagrBONN_evm.TU.Sc2ySwM_289.2 Anthoceros agrestis HOM05D003513 ORTHO05D004660 1.7e-31 140.6 259 39.4
AagrBONN_evm.TU.Sc2ySwM_362.2667 Anthoceros agrestis HOM05D003513 ORTHO05D004660 1.7e-31 140.6 259 39.4
BraA01t02793Z Brassica rapa HOM05D004336 ORTHO05D004660 2.5e-30 136.7 197 46.7
HPP92_025257 Vanilla planifolia HOM05D003513 ORTHO05D004660 4.2e-30 136.0 172 47.1
Hund24144 Selenicereus undatus HOM05D003513 ORTHO05D004660 6.0e-29 132.1 181 48.6
Carub.0007s0673 Capsella rubella HOM05D003513 ORTHO05D004660 3.9e-28 129.4 151 50.3
Nitab4.5_0007763g0010 Nicotiana tabacum HOM05D003513 ORTHO05D004660 2.5e-27 126.7 175 51.4
Sc21g0000900 Simmondsia chinensis HOM05D003513 ORTHO05D004660 3.3e-27 126.3 160 51.9
BcaC04g20358 Brassica carinata HOM05D003513 ORTHO05D004660 1.8e-25 120.6 172 46.5
A05p21550 Brassica napus HOM05D003513 ORTHO05D004660 4.5e-24 115.9 198 42.4
BraA05t21075Z Brassica rapa HOM05D003513 ORTHO05D004660 4.5e-24 115.9 198 42.4
CAN.G192.6 Capsicum annuum HOM05D003513 ORTHO05D004660 7.6e-24 115.2 174 47.7
Migut.B00497 Erythranthe guttata HOM05D003513 ORTHO05D004660 2.9e-23 113.2 172 47.7
BcaB04g17698 Brassica carinata HOM05D003513 ORTHO05D004660 3.8e-23 112.8 201 40.3
Glyma.07G229300 Glycine max HOM05D003513 ORTHO05D004660 6.5e-23 112.1 104 60.6
BcaB02g10961 Brassica carinata HOM05D003513 ORTHO05D004660 1.0e-20 104.8 86 65.1
Eucgr.L02047 Eucalyptus grandis HOM05D003513 ORTHO05D004660 1.0e-20 104.8 149 47.7
Zm00001eb303370 Zea mays HOM05D003513 ORTHO05D004660 1.3e-20 104.4 136 45.6
TAR629G1841 Trochodendron aralioides HOM05D003513 ORTHO05D004660 1.8e-20 104.0 82 80.5
A09p29610 Brassica napus HOM05D003513 ORTHO05D004660 1.3e-18 97.8 195 40.5
A04p04130 Brassica napus HOM05D003513 ORTHO05D004660 1.6e-18 97.4 191 40.8
TPR.G22787 Trifolium pratense HOM05D003513 ORTHO05D004660 6.3e-18 95.5 146 47.3
BcaC08g44431 Brassica carinata HOM05D003513 ORTHO05D013524 1.8e-17 94.0 198 39.4
CARHR105270 Cardamine hirsuta HOM05D003513 ORTHO05D004660 2.4e-17 93.6 181 40.9
Thhalv10021452m.g Eutrema salsugineum HOM05D003513 ORTHO05D004660 2.4e-17 93.6 176 39.8
A08p11320 Brassica napus HOM05D003513 ORTHO05D004660 2.0e-16 90.5 58 77.6
A10p16400 Brassica napus HOM05D003513 ORTHO05D004660 2.0e-16 90.5 58 77.6
C06p15560 Brassica napus HOM05D003513 ORTHO05D004660 2.0e-16 90.5 58 77.6
C08p23080 Brassica napus HOM05D003513 ORTHO05D004660 2.0e-16 90.5 58 77.6
A03p66860 Brassica napus HOM05D003513 ORTHO05D004660 1.0e-15 88.2 71 62.0
A09p33590 Brassica napus HOM05D003513 ORTHO05D004660 1.0e-15 88.2 56 78.6
C06p18710 Brassica napus HOM05D003513 ORTHO05D004660 1.0e-15 88.2 58 75.9
BraA03t15374Z Brassica rapa HOM05D003513 ORTHO05D004660 1.0e-15 88.2 191 38.7
BraA09t38150Z Brassica rapa HOM05D003513 ORTHO05D004660 2.9e-15 86.7 56 76.8
A03p61430 Brassica napus HOM05D003513 ORTHO05D004660 2.5e-14 83.6 120 50.8
Phvul.006G197800 Phaseolus vulgaris HOM05D003513 ORTHO05D004660 4.6e-13 79.3 184 35.3
TWI59G0638 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 1.8e-12 77.4 112 50.0
C01p31670 Brassica napus HOM05D003513 ORTHO05D015800 2.3e-12 77.0 62 66.1
Gohir.A01G179633 Gossypium hirsutum HOM05D003513 ORTHO05D004660 2.5e-11 73.6 51 72.5
TAR636G1841 Trochodendron aralioides HOM05D003513 ORTHO05D004660 2.5e-11 73.6 90 54.4
A05p23280 Brassica napus HOM05D003513 ORTHO05D004660 3.3e-11 73.2 46 76.1
BolC8t52234H Brassica oleracea HOM05D003513 ORTHO05D004660 3.3e-11 73.2 224 33.9
BraA05t21192Z Brassica rapa HOM05D003513 ORTHO05D004660 3.3e-11 73.2 46 76.1
C08p46960 Brassica napus HOM05D003513 ORTHO05D013524 4.8e-10 69.3 224 33.5
Gorai.002G212100 Gossypium raimondii HOM05D003513 ORTHO05D004660 6.3e-10 68.9 51 70.6
BcaB05g23799 Brassica carinata HOM05D003513 ORTHO05D004660 3.4e-08 63.2 114 38.6
MCO09G316 Micromonas commoda HOM05D003513 ORTHO05D004660 3.4e-08 63.2 193 29.0
BcaB06g26524 Brassica carinata HOM05D005554 ORTHO05D021652 1.0e-07 61.6 57 56.1
BcaC06g33105 Brassica carinata HOM05D005554 ORTHO05D021652 3.8e-07 59.7 153 35.9
BolC1t03102H Brassica oleracea HOM05D003531 ORTHO05D015800 2.5e-06 57.0 38 68.4
BcaC09g52177 Brassica carinata HOM05D003513 ORTHO05D004660 3.2e-06 56.6 121 38.8
CBR_g21766 Chara braunii HOM05D003513 ORTHO05D004660 5.5e-06 55.8 141 32.6
C09p21920 Brassica napus HOM05D001670 ORTHO05D015800 9.4e-06 55.1 54 53.7
Cre13.g575366 Chlamydomonas reinhardtii HOM05D003513 ORTHO05D139674 9.4e-06 55.1 56 48.2


User provided reference genes

Program Settings