Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 9.8e-103 376.7 179 100.0
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 7.1e-77 290.8 179 74.3
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.0e-75 287.0 179 72.6
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 1.3e-75 286.6 178 72.5
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 1.7e-75 286.2 179 71.5
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.7e-75 286.2 179 72.1
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 5.1e-75 284.6 183 72.1
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 5.1e-75 284.6 178 69.7
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 4.3e-74 281.6 178 69.7
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 5.6e-74 281.2 178 71.9
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 9.6e-74 280.4 179 71.5
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 9.6e-74 280.4 178 70.8
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 1.4e-72 276.6 179 68.7
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 2.4e-72 275.8 179 68.7
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 3.1e-72 275.4 178 69.7
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 5.3e-72 274.6 178 70.8
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 6.9e-72 274.2 177 68.4
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 2.0e-71 272.7 178 69.7
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 2.0e-71 272.7 178 69.7
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 2.0e-71 272.7 179 69.3
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 3.4e-71 271.9 178 66.9
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 4.5e-71 271.6 180 70.6
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 9.9e-71 270.4 178 66.9
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 9.9e-71 270.4 178 68.5
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 9.9e-71 270.4 178 69.7
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 1.3e-70 270.0 179 66.5
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 1.3e-70 270.0 178 68.0
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 1.7e-70 269.6 176 68.8
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 8.4e-70 267.3 178 66.9
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.1e-69 266.9 176 68.2
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.4e-69 266.5 176 67.6
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 3.2e-69 265.4 179 65.4
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 3.2e-69 265.4 176 67.6
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 4.2e-69 265.0 178 69.7
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 4.2e-69 265.0 176 67.6
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 4.2e-69 265.0 178 65.2
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 4.2e-69 265.0 179 67.6
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.6e-68 263.1 176 65.9
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 2.7e-68 262.3 176 68.2
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 2.3e-67 259.2 179 65.4
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 8.7e-67 257.3 179 67.0
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 1.1e-66 256.9 181 65.2
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 1.9e-66 256.1 179 65.4
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 1.9e-66 256.1 179 67.6
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 4.3e-66 255.0 181 64.1
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 7.4e-66 254.2 178 61.8
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 9.6e-66 253.8 178 65.7
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 9.6e-66 253.8 176 63.6
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 2.1e-65 252.7 180 62.8
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 2.8e-65 252.3 176 63.1
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 2.8e-65 252.3 176 63.1
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 2.8e-65 252.3 176 63.1
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 3.7e-65 251.9 177 61.6
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 4.0e-64 248.4 178 61.8
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 9.0e-64 247.3 165 65.5
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 9.0e-64 247.3 178 63.5
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 4.5e-63 245.0 176 61.4
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 7.6e-63 244.2 179 63.7
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 1.0e-62 243.8 179 62.6
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 1.3e-62 243.4 179 62.6
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 1.3e-62 243.4 179 60.3
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 2.9e-62 242.3 179 61.5
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 6.5e-62 241.1 179 61.5
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 8.4e-62 240.7 178 61.8
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 1.1e-61 240.4 176 63.1
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 1.4e-61 240.0 179 62.0
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 2.5e-61 239.2 178 61.2
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 4.2e-61 238.4 180 61.7
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 1.2e-60 236.9 178 60.7
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 1.2e-60 236.9 178 61.8
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 1.6e-60 236.5 194 58.8
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 2.1e-60 236.1 179 60.3
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 3.5e-60 235.3 178 60.7
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 7.9e-60 234.2 179 60.9
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 7.9e-60 234.2 178 59.6
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 1.0e-59 233.8 150 68.0
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 2.3e-59 232.6 178 60.7
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 3.0e-59 232.3 179 60.3
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 5.1e-59 231.5 184 60.9
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 5.1e-59 231.5 167 63.5
Ah.05g179600 Amaranthus hybridus HOM05D000590 ORTHO05D006825 1.1e-58 230.3 156 64.7
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 2.5e-58 229.2 157 64.3
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 9.6e-58 227.3 152 64.5
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 1.3e-57 226.9 178 59.6
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 2.1e-57 226.1 178 57.3
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 6.2e-57 224.6 179 59.8
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 5.3e-56 221.5 197 53.3
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 1.7e-54 216.5 176 58.0
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 8.4e-54 214.2 150 62.7
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 1.2e-52 210.3 179 55.9
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 1.2e-52 210.3 179 55.9
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 2.1e-52 209.5 179 57.0
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 7.9e-52 207.6 137 70.1
arahy.Tifrunner.gnm1.ann1.0G81PD Arachis hypogaea HOM05D000590 ORTHO05D006825 1.9e-50 203.0 179 55.9
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 1.9e-50 203.0 151 58.9
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 4.3e-50 201.8 179 54.2
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 9.7e-50 200.7 152 60.5
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 9.7e-50 200.7 152 60.5
CSS0016052 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 9.7e-50 200.7 117 76.9
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 4.1e-48 195.3 152 59.2
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 4.1e-48 195.3 152 59.2
A04p00950 Brassica napus HOM05D000590 ORTHO05D006825 2.6e-47 192.6 161 54.0
PSO063G6641 Papaver somniferum HOM05D000590 ORTHO05D006825 5.1e-43 178.3 123 66.7
Sc26g0000670 Simmondsia chinensis HOM05D000590 ORTHO05D006825 2.8e-41 172.6 119 64.7
CDE02G3030 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 1.4e-40 170.2 119 63.0
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 1.4e-40 170.2 153 50.3
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 1.2e-39 167.2 177 45.8
arahy.Tifrunner.gnm1.ann1.AM6JUY Arachis hypogaea HOM05D000590 ORTHO05D006825 2.6e-39 166.0 115 61.7
SMO200G0118 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 1.3e-38 163.7 157 48.4
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 3.2e-37 159.1 157 47.8
SEGI_01413 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 9.4e-37 157.5 119 56.3
HanXRQChr09g0243571 Helianthus annuus HOM05D000590 ORTHO05D006825 1.6e-36 156.8 114 59.6
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 2.1e-36 156.4 216 41.7
CBR_g71803 Chara braunii HOM05D000590 ORTHO05D006825 6.1e-36 154.8 149 46.3
CBR_g49078 Chara braunii HOM05D000590 ORTHO05D006825 3.9e-35 152.1 149 45.0
Os01g0219200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006825 5.1e-35 151.8 178 43.8
Carub.0005s2847 Capsella rubella HOM05D000590 ORTHO05D006825 3.3e-34 149.1 114 56.1
Glyma.07G056100 Glycine max HOM05D000590 ORTHO05D006825 1.7e-33 146.7 115 55.7
AagrBONN_evm.TU.Sc2ySwM_344.2724 Anthoceros agrestis HOM05D000590 ORTHO05D006825 2.2e-33 146.4 120 52.5
ClCG06G001200 Citrullus lanatus HOM05D000590 ORTHO05D006825 4.8e-33 145.2 179 45.3
TPR.G3009 Trifolium pratense HOM05D000590 ORTHO05D006825 6.3e-33 144.8 106 62.3
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 7.7e-31 137.9 154 45.5
Mapoly0251s0003 Marchantia polymorpha HOM05D000590 ORTHO05D006825 4.7e-28 128.6 150 39.3
AT3G62500 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 1.4e-27 127.1 150 46.7
BcaB02g08144 Brassica carinata HOM05D000590 ORTHO05D006825 5.2e-27 125.2 173 41.6
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 1.6e-23 113.6 147 39.5
arahy.Tifrunner.gnm1.ann1.06LZL4 Arachis hypogaea HOM05D000590 ORTHO05D006825 3.5e-23 112.5 62 82.3
Rhsim02G0230200 Rhododendron simsii HOM05D000590 ORTHO05D006825 1.5e-21 107.1 107 44.9
CARHR055570 Cardamine hirsuta HOM05D000590 ORTHO05D006825 1.0e-19 100.9 83 56.6
SHI13291 Sapria himalayana HOM05D000590 ORTHO05D006825 7.5e-18 94.7 63 71.4
Sc26g0000660 Simmondsia chinensis HOM05D000590 ORTHO05D006825 2.2e-17 93.2 58 67.2
GSVIVG01027114001 Vitis vinifera HOM05D000590 ORTHO05D006825 2.4e-16 89.7 64 59.4
GSVIVG01027108001 Vitis vinifera HOM05D000590 ORTHO05D006825 4.1e-16 89.0 64 59.4
Zm00001eb338700 Zea mays HOM05D000590 ORTHO05D006825 1.0e-14 84.3 151 32.5
CSS0003243 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 2.5e-13 79.7 72 55.6
SHI13292 Sapria himalayana HOM05D000590 ORTHO05D006825 4.0e-11 72.4 61 54.1
Zm00001eb197190 Zea mays HOM05D002169 ORTHO05D023180 4.4e-10 68.9 112 33.0


User provided reference genes

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