Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0551 Trochodendron aralioides HOM05D007157 ORTHO05D009045 8.1e-90 334.3 172 100.0
TAR629G1749 Trochodendron aralioides HOM05D007157 ORTHO05D009045 7.4e-67 258.1 148 89.2
FvH4_6g53850 Fragaria vesca HOM05D007157 ORTHO05D009045 3.0e-60 236.1 172 70.3
FAN14G2967 Fragaria x ananassa HOM05D007157 ORTHO05D009045 3.0e-60 236.1 172 70.3
RcHm_v2.0_Chr2g0175991 Rosa chinensis HOM05D007157 ORTHO05D009045 3.9e-60 235.7 172 70.9
FAN05G0711 Fragaria x ananassa HOM05D007157 ORTHO05D009045 8.8e-60 234.6 172 69.8
MD09G1008000 Malus domestica HOM05D007157 ORTHO05D009045 2.6e-59 233.0 167 73.1
Ciclev10014547m.g Citrus clementina HOM05D007157 ORTHO05D009045 5.3e-57 225.3 172 66.9
CiPaw.03G058300 Carya illinoinensis HOM05D007157 ORTHO05D009045 4.2e-54 215.7 149 71.1
AUR62029427 Chenopodium quinoa HOM05D007157 ORTHO05D009045 3.6e-53 212.6 174 64.9
Haze_14901 Corylus avellana HOM05D007157 ORTHO05D009045 3.6e-53 212.6 148 71.6
Hma1.2p1_0812F.1_g222250 Hydrangea macrophylla HOM05D007157 ORTHO05D009045 1.8e-52 210.3 148 71.6
Cfa007204 Carpinus fangiana HOM05D007157 ORTHO05D009045 2.3e-52 209.9 148 70.3
CSS0034431 Camellia sinensis var. sinensis HOM05D007157 ORTHO05D009045 3.9e-52 209.1 148 71.6
CANSAT64G2603 Cannabis sativa HOM05D007157 ORTHO05D009045 3.9e-52 209.1 149 71.1
PSO017G3067 Papaver somniferum HOM05D007157 ORTHO05D009045 3.9e-52 209.1 147 69.4
FAN09G1568 Fragaria x ananassa HOM05D007157 ORTHO05D009045 5.2e-52 208.8 145 73.1
Prupe.3G308900 Prunus persica HOM05D007157 ORTHO05D009045 8.8e-52 208.0 147 72.8
Sc03g0006270 Simmondsia chinensis HOM05D007157 ORTHO05D009045 1.5e-51 207.2 147 70.7
Actinidia36218 Actinidia chinensis HOM05D007157 ORTHO05D009045 2.6e-51 206.5 148 73.0
AUR62003414 Chenopodium quinoa HOM05D000173 ORTHO05D006747 2.6e-51 206.5 162 66.7
Oeu048928.2 Olea europaea HOM05D007157 ORTHO05D009045 4.4e-51 205.7 148 71.6
Atru.chr6.2599 Acer truncatum HOM05D007157 ORTHO05D009045 5.7e-51 205.3 149 71.1
Rhsim10G0004500 Rhododendron simsii HOM05D007157 ORTHO05D009045 2.2e-50 203.4 155 69.7
Duzib147G0388 Durio zibethinus HOM05D007157 ORTHO05D009045 2.8e-50 203.0 149 69.8
Aqoxy5G03262 Aquilegia oxysepala HOM05D007157 ORTHO05D009045 4.8e-50 202.2 147 67.3
Thecc.04G040600 Theobroma cacao HOM05D007157 ORTHO05D009045 6.3e-50 201.8 149 68.5
Cpa.g.c35912 Carica papaya HOM05D007157 ORTHO05D009045 1.4e-49 200.7 148 66.9
COL.COLO4_13293 Corchorus olitorius HOM05D000485 ORTHO05D009045 1.4e-49 200.7 149 68.5
vmacro05975 Vaccinium macrocarpon HOM05D007157 ORTHO05D009045 2.4e-49 199.9 151 70.9
Lj1g0010660 Lotus japonicus HOM05D007157 ORTHO05D009045 7.0e-49 198.4 172 58.7
Potri.001G326800 Populus trichocarpa HOM05D007157 ORTHO05D009045 1.6e-48 197.2 149 67.1
Dinv25644 Davidia involucrata HOM05D007157 ORTHO05D009045 2.0e-48 196.8 135 74.1
Glyma.16G053700 Glycine max HOM05D007157 ORTHO05D009045 3.5e-48 196.1 149 64.4
Sed0017582 Sechium edule HOM05D007157 ORTHO05D009045 4.5e-48 195.7 149 65.1
Nitab4.5_0005858g0130 Nicotiana tabacum HOM05D000485 ORTHO05D009045 5.9e-48 195.3 169 59.8
TWI34G0589 Tripterygium wilfordii HOM05D007157 ORTHO05D009045 5.9e-48 195.3 149 67.1
TWI34G1752 Tripterygium wilfordii HOM05D007157 ORTHO05D009045 5.9e-48 195.3 149 67.1
Sabra16G0209300 Salix brachista HOM05D007157 ORTHO05D009045 1.3e-47 194.1 148 66.2
Eucgr.H03351 Eucalyptus grandis HOM05D007157 ORTHO05D009045 2.9e-47 193.0 148 66.2
Gohir.D04G075000 Gossypium hirsutum HOM05D007157 ORTHO05D009045 3.8e-47 192.6 148 66.9
C09p63050 Brassica napus HOM05D007157 ORTHO05D009045 6.5e-47 191.8 173 55.5
Lj5A824G14 Lonicera japonica HOM05D007157 ORTHO05D009045 8.5e-47 191.4 148 64.9
MELO3C008172.2 Cucumis melo HOM05D007157 ORTHO05D009045 1.1e-46 191.0 148 62.8
Gorai.012G084300 Gossypium raimondii HOM05D007157 ORTHO05D009045 1.9e-46 190.3 148 66.2
A10p24350 Brassica napus HOM05D007157 ORTHO05D009045 2.5e-46 189.9 173 55.5
Gohir.A05G336500 Gossypium hirsutum HOM05D007157 ORTHO05D009045 2.5e-46 189.9 156 62.8
MSTRG.23478 Avicennia marina HOM05D007157 ORTHO05D009045 4.2e-46 189.1 149 63.1
BolC9t59142H Brassica oleracea HOM05D007157 ORTHO05D009045 7.2e-46 188.3 173 54.3
ECA246G1262 Erigeron canadensis HOM05D000482 ORTHO05D000349 7.2e-46 188.3 148 61.5
Manes.04G088300 Manihot esculenta HOM05D007157 ORTHO05D009045 7.2e-46 188.3 148 63.5
GSVIVG01033052001 Vitis vinifera HOM05D007157 ORTHO05D009045 9.4e-46 188.0 131 74.0
BraA10t44501Z Brassica rapa HOM05D007157 ORTHO05D009045 1.2e-45 187.6 173 55.5
Aa31LG11G14870 Aethionema arabicum HOM05D007157 ORTHO05D009045 1.6e-45 187.2 167 56.9
CsaV3_2G034000 Cucumis sativus L. HOM05D007157 ORTHO05D009045 1.6e-45 187.2 149 61.7
Sp6g29920 Schrenkiella parvula HOM05D007157 ORTHO05D009045 2.7e-45 186.4 167 56.9
DCAR_021804 Daucus carota HOM05D007157 ORTHO05D009045 4.7e-45 185.7 150 60.7
QL02p070811 Quercus lobata HOM05D007157 ORTHO05D009045 6.1e-45 185.3 126 73.8
AL6G24740 Arabidopsis lyrata HOM05D007157 ORTHO05D009045 1.4e-44 184.1 159 57.2
SalBow3G1100 Salvia bowleyana HOM05D007157 ORTHO05D009045 3.0e-44 183.0 148 61.5
ClCG11G009400 Citrullus lanatus HOM05D007157 ORTHO05D009045 6.7e-44 181.8 149 61.1
VMungo1383G0567 Vigna mungo HOM05D007157 ORTHO05D009045 1.5e-43 180.6 149 59.1
Migut.H00838 Erythranthe guttata HOM05D007157 ORTHO05D009045 2.0e-43 180.3 147 61.9
SalBow3G1401 Salvia bowleyana HOM05D007157 ORTHO05D009045 3.3e-43 179.5 148 60.8
Thhalv10012953m.g Eutrema salsugineum HOM05D007157 ORTHO05D009045 4.4e-43 179.1 163 56.4
Glyma.19G095500 Glycine max HOM05D007157 ORTHO05D009045 2.2e-42 176.8 172 54.7
Phvul.001G089400 Phaseolus vulgaris HOM05D007157 ORTHO05D009045 4.8e-42 175.6 145 57.9
Cc00_g20250 Coffea canephora HOM05D007157 ORTHO05D009045 6.3e-42 175.3 136 62.5
PGR083G0651 Punica granatum HOM05D007157 ORTHO05D009045 6.3e-42 175.3 148 56.8
arahy.Tifrunner.gnm1.ann1.VP4GDR Arachis hypogaea HOM05D007157 ORTHO05D009045 8.2e-42 174.9 154 57.8
SHI04033 Sapria himalayana HOM05D007157 ORTHO05D009045 8.2e-42 174.9 172 52.9
PGSC0003DMG400020245 Solanum tuberosum HOM05D007157 ORTHO05D009045 2.4e-41 173.3 148 59.5
arahy.Tifrunner.gnm1.ann1.LR7EIQ Arachis hypogaea HOM05D007157 ORTHO05D009045 5.3e-41 172.2 153 56.9
ATR0012G053 Amborella trichopoda HOM05D007157 ORTHO05D009045 7.0e-41 171.8 141 58.2
Lalb_Chr00c01g0403821 Lupinus albus HOM05D007157 ORTHO05D009045 1.6e-40 170.6 144 55.6
Nitab4.5_0000519g0020 Nicotiana tabacum HOM05D007157 ORTHO05D009045 2.0e-40 170.2 148 60.1
EL10Ac6g15443 Beta vulgaris HOM05D007157 ORTHO05D009045 5.9e-40 168.7 143 62.2
CAN.G473.124 Capsicum annuum HOM05D007157 ORTHO05D009045 1.0e-39 167.9 149 59.1
Peaxi162Scf00420g00637 Petunia axillaris HOM05D007157 ORTHO05D009045 1.0e-39 167.9 147 56.5
Solyc02g094310.3 Solanum lycopersicum HOM05D007157 ORTHO05D009045 1.0e-39 167.9 149 59.7
Sopen02g038950 Solanum pennellii HOM05D007157 ORTHO05D009045 1.7e-39 167.2 148 59.5
HanXRQChr17g0551661 Helianthus annuus HOM05D007157 ORTHO05D009045 2.2e-39 166.8 131 64.1
THA.LOC104802372 Tarenaya hassleriana HOM05D007157 ORTHO05D009045 1.5e-38 164.1 148 56.8
FAN02G1074 Fragaria x ananassa HOM05D007157 ORTHO05D009045 5.5e-38 162.2 150 60.0
Lsat_1_v5_gn_0_3360 Lactuca sativa HOM05D007157 ORTHO05D009045 2.1e-37 160.2 126 63.5
TPR.G29476 Trifolium pratense HOM05D007157 ORTHO05D009045 1.0e-36 157.9 172 51.2
HPP92_009778 Vanilla planifolia HOM05D007157 ORTHO05D009045 1.8e-36 157.1 148 51.4
Zm00001eb093300 Zea mays HOM05D007157 ORTHO05D009045 4.0e-36 156.0 149 50.3
Carub.0006s1227 Capsella rubella HOM05D007157 ORTHO05D009045 8.8e-36 154.8 141 54.6
AT5G14080 Arabidopsis thaliana HOM05D007157 ORTHO05D009045 1.5e-35 154.1 141 53.2
Medtr7g027940 Medicago truncatula HOM05D007157 ORTHO05D009045 3.4e-35 152.9 142 54.9
TPR.G8553 Trifolium pratense HOM05D007157 ORTHO05D009045 7.5e-35 151.8 142 54.2
BcaC02g07725 Brassica carinata HOM05D007157 ORTHO05D009045 9.8e-35 151.4 172 48.3
CARHR199280 Cardamine hirsuta HOM05D007157 ORTHO05D009045 1.7e-34 150.6 135 55.6
Psat3g167400 Pisum sativum HOM05D007157 ORTHO05D009045 2.2e-34 150.2 144 51.4
Ca_12649_v3 Cicer arietinum L. HOM05D007157 ORTHO05D009045 8.3e-34 148.3 172 48.3
CDE01G0454 Ceratophyllum demersum HOM05D007157 ORTHO05D009045 1.8e-33 147.1 123 59.3
Ah.03g148180 Amaranthus hybridus HOM05D007157 ORTHO05D009045 1.0e-31 141.4 138 55.8
SGA_v2.0_scaffold211G42168 Striga asiatica HOM05D007157 ORTHO05D009045 1.7e-31 140.6 126 57.1
Lj5A791T21 Lonicera japonica HOM05D007157 ORTHO05D009045 5.5e-30 135.6 148 50.7
Actinidia05886 Actinidia chinensis HOM05D007157 ORTHO05D009045 1.0e-28 131.3 99 70.7
Lj8P534T4 Lonicera japonica HOM05D007157 ORTHO05D009045 1.1e-25 121.3 101 59.4
BolC4t27904H Brassica oleracea HOM05D007157 ORTHO05D009045 1.2e-24 117.9 172 40.1
TPR.G29386 Trifolium pratense HOM05D007157 ORTHO05D009045 5.2e-20 102.4 96 51.0
Nn5g29238 Nelumbo nucifera HOM05D007157 ORTHO05D009045 9.5e-14 81.6 60 68.3
Os03g0782900 Oryza sativa ssp. japonica HOM05D007157 ORTHO05D009045 4.1e-09 66.2 60 51.7
Hund04273 Selenicereus undatus HOM05D007157 ORTHO05D009045 7.8e-08 62.0 43 67.4
unitig_21.g20398 Utricularia gibba HOM05D007291 ORTHO05D009038 1.1e-06 58.2 118 29.7


User provided reference genes

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