Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0484 Trochodendron aralioides HOM05D004409 ORTHO05D005292 5.0e-69 264.2 125 100.0
TAR375G0498 Trochodendron aralioides HOM05D004409 ORTHO05D005292 5.9e-46 187.6 111 73.9
TAR375G0026 Trochodendron aralioides HOM05D004409 ORTHO05D005292 1.0e-45 186.8 114 72.8
TAR375G0880 Trochodendron aralioides HOM05D004409 ORTHO05D005292 9.8e-41 170.2 103 72.8
Dinv28881 Davidia involucrata HOM05D004409 ORTHO05D005292 7.7e-38 160.6 121 57.0
GSVIVG01004835001 Vitis vinifera HOM05D004409 ORTHO05D005292 8.0e-35 150.6 112 55.4
Potri.003G084000 Populus trichocarpa HOM05D004409 ORTHO05D005292 1.5e-33 146.4 113 54.0
TAR636G0884 Trochodendron aralioides HOM05D004409 ORTHO05D005292 2.6e-33 145.6 113 57.5
Actinidia10866 Actinidia chinensis HOM05D004409 ORTHO05D005292 3.4e-33 145.2 113 54.0
Sabra03G0054600 Salix brachista HOM05D004409 ORTHO05D005292 5.7e-33 144.4 113 55.8
Atru.chr9.1197 Acer truncatum HOM05D004409 ORTHO05D005292 9.8e-33 143.7 110 57.3
GSVIVG01004822001 Vitis vinifera HOM05D004409 ORTHO05D005292 9.8e-33 143.7 101 59.4
GSVIVG01004827001 Vitis vinifera HOM05D004409 ORTHO05D005292 9.8e-33 143.7 101 59.4
Actinidia31492 Actinidia chinensis HOM05D004409 ORTHO05D005292 1.8e-31 139.4 110 54.5
CSS0044628 Camellia sinensis var. sinensis HOM05D004409 ORTHO05D005292 4.1e-31 138.3 107 53.3
Duzib068G1042 Durio zibethinus HOM05D004409 ORTHO05D005292 4.1e-31 138.3 113 51.3
Thecc.03G239100 Theobroma cacao HOM05D004409 ORTHO05D005292 7.0e-31 137.5 114 54.4
TWI60G0543 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 9.2e-31 137.1 105 53.3
Duzib205G0528 Durio zibethinus HOM05D004409 ORTHO05D005292 1.2e-30 136.7 113 53.1
Dinv28880 Davidia involucrata HOM05D001887 ORTHO05D003756 4.5e-30 134.8 109 53.2
Ciclev10022946m.g Citrus clementina HOM05D004409 ORTHO05D005292 5.9e-30 134.4 107 52.3
Dinv34530 Davidia involucrata HOM05D004409 ORTHO05D005292 1.3e-29 133.3 114 48.2
Hma1.2p1_1014F.1_g247850 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 1.3e-29 133.3 108 52.8
Nitab4.5_0000185g0190 Nicotiana tabacum HOM05D004409 ORTHO05D005292 1.3e-29 133.3 112 51.8
Duzib205G0410 Durio zibethinus HOM05D004409 ORTHO05D005292 1.7e-29 132.9 113 56.6
FAN10G3781 Fragaria x ananassa HOM05D004409 ORTHO05D005292 1.7e-29 132.9 114 50.9
FvH4_7g26400 Fragaria vesca HOM05D004409 ORTHO05D005292 2.3e-29 132.5 114 51.8
Manes.01G089900 Manihot esculenta HOM05D004409 ORTHO05D005292 3.8e-29 131.7 107 54.2
Thecc.03G144800 Theobroma cacao HOM05D004409 ORTHO05D005292 6.6e-29 131.0 114 52.6
Hma1.2p1_3159F.1_g333389 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 8.6e-29 130.6 118 48.3
QL12p008592 Quercus lobata HOM05D004409 ORTHO05D005292 8.6e-29 130.6 116 51.7
GSVIVG01013815001 Vitis vinifera HOM05D004409 ORTHO05D005292 4.3e-28 128.3 118 48.3
Hma1.2p1_1014F.1_g247840 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 5.6e-28 127.9 108 50.9
COL.COLO4_06685 Corchorus olitorius HOM05D004409 ORTHO05D005292 7.3e-28 127.5 99 52.5
COL.COLO4_37301 Corchorus olitorius HOM05D004409 ORTHO05D005292 7.3e-28 127.5 112 53.6
TWI39G0193 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 1.2e-27 126.7 110 53.6
Gohir.D12G214900 Gossypium hirsutum HOM05D004409 ORTHO05D005292 2.8e-27 125.6 111 45.9
Thecc.03G144700 Theobroma cacao HOM05D004409 ORTHO05D005292 2.8e-27 125.6 105 53.3
Thecc.03G144900 Theobroma cacao HOM05D004409 ORTHO05D005292 2.8e-27 125.6 110 51.8
TWI39G0462 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 2.8e-27 125.6 110 52.7
Atru.chr6.1971 Acer truncatum HOM05D004409 ORTHO05D005292 6.1e-27 124.4 104 51.0
Ciclev10030379m.g Citrus clementina HOM05D004409 ORTHO05D005292 6.1e-27 124.4 85 58.8
TWI39G0310 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 6.1e-27 124.4 110 51.8
Gohir.A12G212400 Gossypium hirsutum HOM05D004409 ORTHO05D005292 8.0e-27 124.0 111 44.1
Gorai.008G230500 Gossypium raimondii HOM05D004409 ORTHO05D005292 1.0e-26 123.6 111 44.1
Aqoxy3G02644 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 1.4e-26 123.2 105 48.6
Peaxi162Scf00102g00085 Petunia axillaris HOM05D004409 ORTHO05D005292 1.8e-26 122.9 108 46.3
Prupe.5G054600 Prunus persica HOM05D004409 ORTHO05D005292 2.3e-26 122.5 117 51.3
DCAR_008327 Daucus carota HOM05D004409 ORTHO05D005292 3.0e-26 122.1 85 56.5
TWI39G0819 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 4.0e-26 121.7 108 53.7
Duzib068G0789 Durio zibethinus HOM05D004409 ORTHO05D005292 5.2e-26 121.3 108 48.1
Actinidia01026 Actinidia chinensis HOM05D004409 ORTHO05D005292 8.9e-26 120.6 108 47.2
Cc08_g11210 Coffea canephora HOM05D004409 ORTHO05D005292 8.9e-26 120.6 107 52.3
RcHm_v2.0_Chr1g0372951 Rosa chinensis HOM05D004409 ORTHO05D005292 8.9e-26 120.6 102 52.9
Cfa012333 Carpinus fangiana HOM05D004409 ORTHO05D005292 1.2e-25 120.2 109 48.6
THA.LOC104809923 Tarenaya hassleriana HOM05D004409 ORTHO05D005292 1.2e-25 120.2 87 57.5
RcHm_v2.0_Chr1g0328171 Rosa chinensis HOM05D004409 ORTHO05D005292 1.5e-25 119.8 106 50.0
PGSC0003DMG400026212 Solanum tuberosum HOM05D004409 ORTHO05D005292 1.5e-25 119.8 103 49.5
GSVIVG01004832001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.5e-25 119.8 87 55.2
Cc06_g12260 Coffea canephora HOM05D004409 ORTHO05D005292 2.0e-25 119.4 108 46.3
MELO3C014170.2 Cucumis melo HOM05D004409 ORTHO05D005292 2.6e-25 119.0 111 46.8
ECA240G1407 Erigeron canadensis HOM05D004409 ORTHO05D005292 2.6e-25 119.0 87 54.0
Cfa012334 Carpinus fangiana HOM05D004409 ORTHO05D005292 3.4e-25 118.6 106 49.1
Eucgr.K00114 Eucalyptus grandis HOM05D004409 ORTHO05D005292 3.4e-25 118.6 81 56.8
CAN.G572.17 Capsicum annuum HOM05D004409 ORTHO05D005292 4.4e-25 118.2 95 53.7
GSVIVG01013825001 Vitis vinifera HOM05D004409 ORTHO05D005292 7.5e-25 117.5 126 42.1
RcHm_v2.0_Chr1g0372991 Rosa chinensis HOM05D004409 ORTHO05D005292 9.8e-25 117.1 103 48.5
Sed0027041 Sechium edule HOM05D004409 ORTHO05D005292 9.8e-25 117.1 114 46.5
MELO3C013895.2 Cucumis melo HOM05D004409 ORTHO05D005292 1.3e-24 116.7 112 45.5
FvH4_7g26430 Fragaria vesca HOM05D004409 ORTHO05D005292 1.3e-24 116.7 110 46.4
Lsat_1_v5_gn_6_94501 Lactuca sativa HOM05D004409 ORTHO05D005292 1.3e-24 116.7 111 45.0
GSVIVG01004836001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.3e-24 116.7 114 44.7
RcHm_v2.0_Chr1g0328141 Rosa chinensis HOM05D004409 ORTHO05D005292 2.2e-24 115.9 103 47.6
Haze_08359 Corylus avellana HOM05D004409 ORTHO05D005292 2.9e-24 115.5 100 53.0
FAN03G2468 Fragaria x ananassa HOM05D004409 ORTHO05D005292 2.9e-24 115.5 110 46.4
PGR142G3629 Punica granatum HOM05D004409 ORTHO05D005292 2.9e-24 115.5 101 47.5
HanXRQChr03g0089681 Helianthus annuus HOM05D004409 ORTHO05D005292 3.7e-24 115.2 87 49.4
CANSAT21G0033 Cannabis sativa HOM05D004409 ORTHO05D005292 4.9e-24 114.8 114 43.9
HanXRQChr13g0419061 Helianthus annuus HOM05D004409 ORTHO05D005292 4.9e-24 114.8 106 43.4
Oeu006074.1 Olea europaea HOM05D004409 ORTHO05D005292 6.4e-24 114.4 102 47.1
DCAR_005587 Daucus carota HOM05D004409 ORTHO05D005292 8.3e-24 114.0 103 48.5
CAN.G845.22 Capsicum annuum HOM05D004409 ORTHO05D005292 1.1e-23 113.6 108 44.4
GSVIVG01024506001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.1e-23 113.6 102 46.1
Oeu019420.1 Olea europaea HOM05D004409 ORTHO05D005292 1.4e-23 113.2 105 44.8
Oeu056339.1 Olea europaea HOM05D004409 ORTHO05D005292 1.9e-23 112.8 106 47.2
GSVIVG01013894001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.9e-23 112.8 88 51.1
CsaV3_3G002240 Cucumis sativus L. HOM05D004409 ORTHO05D005292 2.4e-23 112.5 112 43.8
GSVIVG01024502001 Vitis vinifera HOM05D004409 ORTHO05D005292 2.4e-23 112.5 118 43.2
PGR042G3450 Punica granatum HOM05D004409 ORTHO05D005292 3.2e-23 112.1 121 43.0
Atru.chr9.1196 Acer truncatum HOM05D004409 ORTHO05D005292 4.1e-23 111.7 90 51.1
ClCG10G002150 Citrullus lanatus HOM05D004409 ORTHO05D005292 4.1e-23 111.7 97 49.5
Dinv25140 Davidia involucrata HOM05D004409 ORTHO05D005292 4.1e-23 111.7 110 43.6
CsaV3_3G004710 Cucumis sativus L. HOM05D004409 ORTHO05D005292 5.4e-23 111.3 103 46.6
FAN10G4140 Fragaria x ananassa HOM05D004409 ORTHO05D005292 7.0e-23 110.9 87 52.9
Ciclev10022894m.g Citrus clementina HOM05D004409 ORTHO05D005292 9.2e-23 110.5 106 43.4
COL.COLO4_32251 Corchorus olitorius HOM05D004409 ORTHO05D005292 9.2e-23 110.5 115 47.0
COL.COLO4_37302 Corchorus olitorius HOM05D004409 ORTHO05D005292 9.2e-23 110.5 105 45.7
FAN17G1151 Fragaria x ananassa HOM05D004409 ORTHO05D005292 9.2e-23 110.5 111 45.9
GSVIVG01013816001 Vitis vinifera HOM05D004409 ORTHO05D005292 9.2e-23 110.5 88 52.3
CANSAT56G2887 Cannabis sativa HOM05D004409 ORTHO05D005292 1.6e-22 109.8 106 44.3
Cpa.g.sc13.213 Carica papaya HOM05D004409 ORTHO05D005292 1.6e-22 109.8 111 47.7
FAN06G5092 Fragaria x ananassa HOM05D004409 ORTHO05D005292 1.6e-22 109.8 104 46.2
Lsat_1_v5_gn_6_94401 Lactuca sativa HOM05D004409 ORTHO05D005292 1.6e-22 109.8 104 44.2
CANSAT21G0737 Cannabis sativa HOM05D004409 ORTHO05D005292 2.0e-22 109.4 91 49.5
CANSAT56G0658 Cannabis sativa HOM05D004409 ORTHO05D005292 2.0e-22 109.4 111 45.0
CANSAT56G4079 Cannabis sativa HOM05D004409 ORTHO05D005292 2.0e-22 109.4 111 45.0
ECA240G0589 Erigeron canadensis HOM05D004409 ORTHO05D005292 2.7e-22 109.0 108 42.6
Hma1.2p1_1014F.1_g247830 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 2.7e-22 109.0 99 48.5
HanXRQChr03g0089691 Helianthus annuus HOM05D004409 ORTHO05D005292 3.5e-22 108.6 101 44.6
Aqoxy6G00065 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 4.6e-22 108.2 118 45.8
FAN01G0604 Fragaria x ananassa HOM05D004409 ORTHO05D005292 4.6e-22 108.2 110 43.6
CANSAT56G2756 Cannabis sativa HOM05D004409 ORTHO05D005292 7.8e-22 107.5 102 46.1
EL10Ac1g00121 Beta vulgaris HOM05D004409 ORTHO05D005292 3.9e-21 105.1 99 43.4
ECA240G4009 Erigeron canadensis HOM05D004409 ORTHO05D005292 3.9e-21 105.1 81 53.1
GSVIVG01004838001 Vitis vinifera HOM05D004409 ORTHO05D005292 5.0e-21 104.8 103 43.7
HanXRQChr13g0419051 Helianthus annuus HOM05D004409 ORTHO05D005292 8.6e-21 104.0 108 40.7
COL.COLO4_21695 Corchorus olitorius HOM05D004409 ORTHO05D005292 1.1e-20 103.6 86 48.8
ATR1136G211 Amborella trichopoda HOM05D004409 ORTHO05D005292 4.3e-20 101.7 108 42.6
Migut.H01906 Erythranthe guttata HOM05D004409 ORTHO05D005292 4.3e-20 101.7 113 38.9
Gohir.D13G124300 Gossypium hirsutum HOM05D004409 ORTHO05D005292 9.5e-20 100.5 110 40.0
Thecc.08G189000 Theobroma cacao HOM05D004409 ORTHO05D005292 9.5e-20 100.5 107 40.2
MD07G1239800 Malus domestica HOM05D004409 ORTHO05D005292 1.6e-19 99.8 110 43.6
Hund27103 Selenicereus undatus HOM05D004409 ORTHO05D005292 1.6e-19 99.8 119 37.8
DCAR_003519 Daucus carota HOM05D004409 ORTHO05D005292 3.6e-19 98.6 85 45.9
SGA_v2.0_scaffold91G28102 Striga asiatica HOM05D004409 ORTHO05D005292 3.6e-19 98.6 104 44.2
Ciclev10033339m.g Citrus clementina HOM05D004409 ORTHO05D005292 4.7e-19 98.2 86 46.5
Prupe.7G057100 Prunus persica HOM05D004409 ORTHO05D005292 4.7e-19 98.2 115 43.5
MD07G1239700 Malus domestica HOM05D004409 ORTHO05D005292 6.2e-19 97.8 105 44.8
MSTRG.27238 Avicennia marina HOM05D004409 ORTHO05D005292 8.0e-19 97.4 104 41.3
Actinidia25914 Actinidia chinensis HOM05D004409 ORTHO05D005292 1.1e-18 97.1 114 38.6
Eucgr.K00115 Eucalyptus grandis HOM05D004409 ORTHO05D005292 1.1e-18 97.1 115 45.2
Migut.H01907 Erythranthe guttata HOM05D004409 ORTHO05D005292 2.3e-18 95.9 114 35.1
HanXRQChr13g0418291 Helianthus annuus HOM05D004409 ORTHO05D005292 4.0e-18 95.1 87 46.0
ATR1136G026 Amborella trichopoda HOM05D004409 ORTHO05D005292 6.8e-18 94.4 105 39.0
Thecc.07G180600 Theobroma cacao HOM05D004409 ORTHO05D005292 6.8e-18 94.4 109 37.6
MD07G1239500 Malus domestica HOM05D004409 ORTHO05D005292 2.0e-17 92.8 101 40.6
Peaxi162Scf00391g00715 Petunia axillaris HOM05D004409 ORTHO05D005292 2.6e-17 92.4 107 38.3
ATR1136G215 Amborella trichopoda HOM05D004409 ORTHO05D005292 1.7e-16 89.7 104 38.5
TAR636G0767 Trochodendron aralioides HOM05D004409 ORTHO05D005292 1.9e-15 86.3 65 58.5
Migut.J00932 Erythranthe guttata HOM05D004409 ORTHO05D005292 2.4e-15 85.9 106 36.8
THA.LOC104816486 Tarenaya hassleriana HOM05D004409 ORTHO05D005292 3.2e-15 85.5 105 38.1
Ciclev10033338m.g Citrus clementina HOM05D004409 ORTHO05D005292 2.1e-14 82.8 105 39.0
Aa31LG9G14800 Aethionema arabicum HOM05D004409 ORTHO05D005292 1.7e-13 79.7 104 38.5
Cfa012335 Carpinus fangiana HOM05D004409 ORTHO05D005292 1.7e-13 79.7 106 35.8
Carub.0006s2782 Capsella rubella HOM05D004409 ORTHO05D005292 3.9e-13 78.6 104 40.4
CARHR260260 Cardamine hirsuta HOM05D004409 ORTHO05D005292 6.6e-13 77.8 105 41.0
Sp6g08250 Schrenkiella parvula HOM05D004409 ORTHO05D005292 4.3e-12 75.1 101 35.6
BcaB01g02799 Brassica carinata HOM05D004409 ORTHO05D005292 5.6e-12 74.7 104 38.5
TAR375G0011 Trochodendron aralioides HOM05D004409 ORTHO05D414893 7.3e-12 74.3 51 72.5
BcaC01g03728 Brassica carinata HOM05D004409 ORTHO05D005292 9.5e-12 73.9 101 37.6
BcaB04g18966 Brassica carinata HOM05D004409 ORTHO05D005292 4.7e-11 71.6 101 37.6
Gorai.013G138900 Gossypium raimondii HOM05D004409 ORTHO05D005292 8.1e-11 70.9 60 45.0
C03p49230 Brassica napus HOM05D004409 ORTHO05D005292 8.9e-10 67.4 99 33.3
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 3.4e-09 65.5 98 32.7
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 3.4e-09 65.5 98 32.7
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 3.4e-09 65.5 98 32.7
ATR0745G048 Amborella trichopoda HOM05D004409 ORTHO05D005292 4.4e-09 65.1 72 36.1
A03p40420 Brassica napus HOM05D004409 ORTHO05D005292 4.4e-09 65.1 95 34.7
BolC3t17205H Brassica oleracea HOM05D004409 ORTHO05D005292 4.4e-09 65.1 95 34.7
BraA03t13197Z Brassica rapa HOM05D004409 ORTHO05D005292 4.4e-09 65.1 95 34.7
Thhalv10026604m.g Eutrema salsugineum HOM05D002739 ORTHO05D002877 6.4e-08 61.2 113 29.2
PSO339G0161 Papaver somniferum HOM05D002739 ORTHO05D002877 6.4e-08 61.2 107 31.8
Nn7g36459 Nelumbo nucifera HOM05D002739 ORTHO05D002877 1.9e-07 59.7 108 31.5
Nn2g15046 Nelumbo nucifera HOM05D002739 ORTHO05D002877 3.2e-07 58.9 115 25.2
MD02G1296300 Malus domestica HOM05D002739 ORTHO05D002877 4.1e-07 58.5 61 37.7
Nn7g36457 Nelumbo nucifera HOM05D002739 ORTHO05D002877 9.2e-07 57.4 124 29.8
Prupe.2G028300 Prunus persica HOM05D002739 ORTHO05D002877 9.2e-07 57.4 61 39.3
Sp7g31290 Schrenkiella parvula HOM05D002739 ORTHO05D002877 1.2e-06 57.0 114 27.2
Aqoxy2G00281 Aquilegia oxysepala HOM05D002739 ORTHO05D002877 1.6e-06 56.6 106 27.4
CARHR241650 Cardamine hirsuta HOM05D002739 ORTHO05D002877 2.1e-06 56.2 107 29.9
THA.LOC104826487 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 2.1e-06 56.2 59 37.3
BcaB03g12793 Brassica carinata HOM05D002739 ORTHO05D002877 2.7e-06 55.8 113 27.4
Actinidia16366 Actinidia chinensis HOM05D002739 ORTHO05D002877 3.5e-06 55.5 60 40.0
COL.COLO4_36502 Corchorus olitorius HOM05D002739 ORTHO05D002877 4.6e-06 55.1 111 28.8
Nn7g36442 Nelumbo nucifera HOM05D002739 ORTHO05D002877 6.0e-06 54.7 60 36.7
Nn7g38448 Nelumbo nucifera HOM05D002739 ORTHO05D002877 6.0e-06 54.7 60 36.7
AL7G17970 Arabidopsis lyrata HOM05D002739 ORTHO05D002877 7.8e-06 54.3 59 35.6
AT4G33550 Arabidopsis thaliana HOM05D002739 ORTHO05D002877 7.8e-06 54.3 59 35.6
BcaC01g00985 Brassica carinata HOM05D002739 ORTHO05D002877 7.8e-06 54.3 59 35.6
PSO339G6632 Papaver somniferum HOM05D002739 ORTHO05D002877 7.8e-06 54.3 59 37.3


User provided reference genes

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