Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0331 Trochodendron aralioides HOM05D007047 ORTHO05D009177 1.2e-203 713.0 366 100.0
Dinv28849 Davidia involucrata HOM05D007047 ORTHO05D006202 1.7e-53 214.2 360 42.8
Nn6g33825 Nelumbo nucifera HOM05D007047 ORTHO05D009177 3.0e-50 203.4 347 40.3
Hma1.2p1_0821F.1_g224180 Hydrangea macrophylla HOM05D007047 ORTHO05D009177 4.0e-42 176.4 352 40.3
GSVIVG01004793001 Vitis vinifera HOM05D000549 ORTHO05D006202 1.2e-41 174.9 358 38.0
Dinv39189 Davidia involucrata HOM05D000549 ORTHO05D006202 9.2e-39 165.2 245 44.1
QL12p009685 Quercus lobata HOM05D007047 ORTHO05D009177 9.2e-39 165.2 356 36.5
Potri.003G080700 Populus trichocarpa HOM05D007047 ORTHO05D009177 3.0e-37 160.2 391 34.5
CSS0008245 Camellia sinensis var. sinensis HOM05D007047 ORTHO05D009177 4.3e-36 156.4 447 32.7
CiPaw.12G048400 Carya illinoinensis HOM05D007047 ORTHO05D009177 1.6e-35 154.5 354 34.7
QL12p009257 Quercus lobata HOM05D007047 ORTHO05D009177 2.8e-35 153.7 351 35.6
Manes.02G042900 Manihot esculenta HOM05D007047 ORTHO05D009177 8.1e-35 152.1 364 34.9
Actinidia31505 Actinidia chinensis HOM05D007047 ORTHO05D006202 8.9e-34 148.7 363 35.8
Sabra03G0052300 Salix brachista HOM05D007047 ORTHO05D009177 1.5e-33 147.9 389 33.4
COL.COLO4_10022 Corchorus olitorius HOM05D007047 ORTHO05D009177 3.4e-33 146.7 403 34.0
CANSAT21G2499 Cannabis sativa HOM05D007047 ORTHO05D009177 7.5e-33 145.6 360 34.2
Thecc.03G244500 Theobroma cacao HOM05D007047 ORTHO05D009177 2.2e-32 144.1 387 34.4
Duzib205G0846 Durio zibethinus HOM05D007047 ORTHO05D009177 8.3e-32 142.1 350 37.1
FAN08G2081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 1.6e-30 137.9 343 32.4
Oeu045687.1 Olea europaea HOM05D007047 ORTHO05D009177 6.0e-30 136.0 359 34.0
CSS0009500 Camellia sinensis var. sinensis HOM05D007047 ORTHO05D009177 5.1e-29 132.9 344 33.7
FvH4_2g33151 Fragaria vesca HOM05D007047 ORTHO05D009177 1.9e-28 131.0 348 31.0
Rhsim07G0117500 Rhododendron simsii HOM05D007047 ORTHO05D009177 3.3e-28 130.2 351 33.6
Atru.chr9.1243 Acer truncatum HOM05D007047 ORTHO05D009177 4.3e-28 129.8 400 32.2
Oeu045675.1 Olea europaea HOM05D007047 ORTHO05D009177 7.3e-28 129.0 355 33.2
FAN04G0327 Fragaria x ananassa HOM05D007047 ORTHO05D009177 9.5e-28 128.6 343 31.8
Hund11335 Selenicereus undatus HOM05D007047 ORTHO05D009177 2.1e-27 127.5 347 32.6
DCAR_000643 Daucus carota HOM05D007047 ORTHO05D009177 3.6e-27 126.7 353 32.6
ClCG10G002400 Citrullus lanatus HOM05D007047 ORTHO05D009177 6.2e-27 125.9 347 33.7
Glyma.01G206100 Glycine max HOM05D007047 ORTHO05D009177 8.1e-27 125.6 343 31.8
arahy.Tifrunner.gnm1.ann1.J4EMKX Arachis hypogaea HOM05D007047 ORTHO05D009177 1.8e-26 124.4 365 30.7
arahy.Tifrunner.gnm1.ann1.XH35PM Arachis hypogaea HOM05D007047 ORTHO05D009177 1.8e-26 124.4 365 30.7
FAN24G2075 Fragaria x ananassa HOM05D007047 ORTHO05D009177 3.1e-26 123.6 350 30.9
Prupe.4G179300 Prunus persica HOM05D007047 ORTHO05D009177 4.0e-26 123.2 441 31.3
RcHm_v2.0_Chr7g0204751 Rosa chinensis HOM05D007047 ORTHO05D009177 6.8e-26 122.5 347 32.3
Haze_07962 Corylus avellana HOM05D007047 ORTHO05D009177 8.9e-26 122.1 370 30.5
Rhsim07G0117200 Rhododendron simsii HOM05D007047 ORTHO05D009177 2.0e-25 120.9 340 33.5
THA.LOC104807915 Tarenaya hassleriana HOM05D007047 ORTHO05D009177 2.0e-25 120.9 388 28.9
CAN.G62.14 Capsicum annuum HOM05D007047 ORTHO05D009177 1.3e-24 118.2 345 32.8
Aqoxy3G02722 Aquilegia oxysepala HOM05D007047 ORTHO05D009177 1.7e-24 117.9 353 32.3
MELO3C013912.2 Cucumis melo HOM05D007047 ORTHO05D009177 4.9e-24 116.3 334 34.7
Migut.A01028 Erythranthe guttata HOM05D007047 ORTHO05D009177 6.4e-24 115.9 395 30.1
Nitab4.5_0000506g0030 Nicotiana tabacum HOM05D007047 ORTHO05D009177 8.4e-24 115.5 340 32.6
PGSC0003DMG400024159 Solanum tuberosum HOM05D007047 ORTHO05D009177 1.1e-23 115.2 359 32.3
Solyc06g060860.2 Solanum lycopersicum HOM05D007047 ORTHO05D009177 2.4e-23 114.0 338 31.7
SalBow6G1440 Salvia bowleyana HOM05D007047 ORTHO05D009177 4.1e-23 113.2 384 32.0
TWI60G0889 Tripterygium wilfordii HOM05D007047 ORTHO05D009177 7.1e-23 112.5 341 32.3
FAN27G3081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 9.2e-23 112.1 329 31.3
Sopen06g021010 Solanum pennellii HOM05D007047 ORTHO05D009177 9.2e-23 112.1 341 33.4
MD06G1050900 Malus domestica HOM05D007047 ORTHO05D009177 2.7e-22 110.5 348 31.3
PSO063G2347 Papaver somniferum HOM05D007047 ORTHO05D009177 2.7e-22 110.5 467 28.3
Ciclev10024423m.g Citrus clementina HOM05D007047 ORTHO05D009177 6.0e-22 109.4 359 31.8
MBI04_g41764_MAGBIO Magnolia biondii HOM05D007047 ORTHO05D009177 7.8e-22 109.0 277 32.5
Nitab4.5_0006375g0010 Nicotiana tabacum HOM05D007047 ORTHO05D009177 3.0e-21 107.1 336 31.0
PGR031G1177 Punica granatum HOM05D007047 ORTHO05D009177 3.0e-21 107.1 347 28.5
Lj2g0019775 Lotus japonicus HOM05D007047 ORTHO05D009177 6.6e-21 105.9 340 31.2
Thhalv10027153m.g Eutrema salsugineum HOM05D007047 ORTHO05D009177 1.9e-20 104.4 351 28.8
Phvul.002G000400 Phaseolus vulgaris HOM05D007047 ORTHO05D009177 3.3e-20 103.6 332 31.3
TPR.G17974 Trifolium pratense HOM05D007047 ORTHO05D009177 4.3e-20 103.2 339 30.4
Ah.10g026860 Amaranthus hybridus HOM05D007047 ORTHO05D009177 5.6e-20 102.8 336 30.1
Medtr5g013140 Medicago truncatula HOM05D007047 ORTHO05D009177 5.6e-20 102.8 336 31.2
Sed0008627 Sechium edule HOM05D007047 ORTHO05D009177 5.6e-20 102.8 346 28.6
SGA_v2.0_scaffold104G30204 Striga asiatica HOM05D007047 ORTHO05D009177 7.3e-20 102.4 371 28.8
CsaV3_3G002430 Cucumis sativus L. HOM05D007047 ORTHO05D009177 9.6e-20 102.1 334 33.5
Gohir.A08G166600 Gossypium hirsutum HOM05D007047 ORTHO05D009177 9.6e-20 102.1 362 30.4
Gorai.004G194800 Gossypium raimondii HOM05D007047 ORTHO05D009177 2.8e-19 100.5 356 30.1
Carub.0007s2455 Capsella rubella HOM05D007047 ORTHO05D009177 3.6e-19 100.1 355 30.1
Ca_24599_v3 Cicer arietinum L. HOM05D007047 ORTHO05D009177 3.6e-19 100.1 337 30.0
Ciclev10019636m.g Citrus clementina HOM05D000549 ORTHO05D006202 6.2e-19 99.4 248 34.3
Eucgr.D02116 Eucalyptus grandis HOM05D007047 ORTHO05D009177 1.4e-18 98.2 334 30.2
Sp7g17290 Schrenkiella parvula HOM05D007047 ORTHO05D009177 1.4e-18 98.2 345 29.0
AL7G37840 Arabidopsis lyrata HOM05D007047 ORTHO05D009177 6.9e-18 95.9 353 28.6
Lalb_Chr16g0379431 Lupinus albus HOM05D007047 ORTHO05D009177 8.9e-18 95.5 396 26.5
Psat2g177160 Pisum sativum HOM05D007047 ORTHO05D009177 8.9e-18 95.5 380 29.7
Cc08_g11870 Coffea canephora HOM05D000549 ORTHO05D006202 1.2e-17 95.1 200 38.0
AUR62006813 Chenopodium quinoa HOM05D007047 ORTHO05D009177 2.0e-17 94.4 347 29.1
Peaxi162Scf00190g01213 Petunia axillaris HOM05D007047 ORTHO05D009177 2.0e-17 94.4 334 29.3
Cpa.g.sc559.1 Carica papaya HOM05D007047 ORTHO05D009177 2.6e-17 94.0 343 31.2
FAN20G0731 Fragaria x ananassa HOM05D007047 ORTHO05D009177 2.6e-17 94.0 339 28.6
VMungo1215G0554 Vigna mungo HOM05D002164 ORTHO05D002267 4.4e-17 93.2 400 28.5
AUR62000471 Chenopodium quinoa HOM05D007047 ORTHO05D009177 7.6e-17 92.4 352 29.5
A08p12720 Brassica napus HOM05D007047 ORTHO05D006202 1.7e-16 91.3 348 27.3
AT4G16807 Arabidopsis thaliana HOM05D007047 ORTHO05D009177 2.9e-16 90.5 355 28.2
CARHR223430 Cardamine hirsuta HOM05D007047 ORTHO05D009177 2.9e-16 90.5 413 25.9
BraA08t33261Z Brassica rapa HOM05D007047 ORTHO05D009177 7.1e-15 85.9 340 27.6
EL10Ac4g09553 Beta vulgaris HOM05D007047 ORTHO05D009177 1.2e-14 85.1 358 26.5
BcaB04g18396 Brassica carinata HOM05D007047 ORTHO05D006202 3.5e-14 83.6 390 26.9
BolC8t48412H Brassica oleracea HOM05D007047 ORTHO05D009177 7.8e-14 82.4 353 26.1
BcaC07g38023 Brassica carinata HOM05D007047 ORTHO05D009177 1.0e-13 82.0 339 26.5
Zm00001eb428340 Zea mays HOM05D007047 ORTHO05D009177 1.9e-12 77.8 419 24.8
ECA240G0572 Erigeron canadensis HOM05D007047 ORTHO05D009177 3.3e-12 77.0 340 26.5
MSTRG.25515 Avicennia marina HOM05D007047 ORTHO05D009177 5.6e-12 76.3 357 27.7
Aa31LG2G12990 Aethionema arabicum HOM05D007047 ORTHO05D009177 4.8e-11 73.2 364 26.4
HPP92_022107 Vanilla planifolia HOM05D007047 ORTHO05D009177 8.1e-11 72.4 117 41.0
Medtr5g013080 Medicago truncatula HOM05D007047 ORTHO05D009177 1.4e-10 71.6 55 61.8
Lsat_1_v5_gn_4_126100 Lactuca sativa HOM05D007047 ORTHO05D009177 5.8e-09 66.2 343 26.5
FvH4_5g19900 Fragaria vesca HOM05D007047 ORTHO05D009177 1.3e-08 65.1 84 47.6
FAN18G3895 Fragaria x ananassa HOM05D007047 ORTHO05D009177 3.8e-08 63.5 297 27.3
Thhalv10027163m.g Eutrema salsugineum HOM05D007047 ORTHO05D009177 4.2e-07 60.1 56 50.0
FAN18G3996 Fragaria x ananassa HOM05D007047 ORTHO05D009177 7.1e-07 59.3 90 42.2
unitig_744.g24476 Utricularia gibba HOM05D007047 ORTHO05D009177 2.1e-06 57.8 115 36.5
ATR0057G113 Amborella trichopoda HOM05D007047 ORTHO05D009177 2.7e-06 57.4 241 26.6
Os11g0249300 Oryza sativa ssp. japonica HOM05D007047 ORTHO05D009177 4.6e-06 56.6 409 25.4
HanXRQChr11g0329491 Helianthus annuus HOM05D007047 ORTHO05D009177 6.0e-06 56.2 61 49.2


User provided reference genes

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