Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.8e-125 453.0 296 100.0
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.4e-101 373.6 296 81.8
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 3.3e-95 352.4 295 69.2
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 5.2e-93 345.1 296 71.6
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 4.4e-92 342.0 298 63.8
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.8e-91 339.0 296 64.2
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 1.4e-90 337.0 305 71.5
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 1.9e-90 336.7 296 62.8
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 2.4e-90 336.3 299 80.6
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 2.4e-90 336.3 296 64.5
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 2.1e-89 333.2 308 64.9
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 7.8e-89 331.3 308 61.7
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.0e-88 330.9 299 62.2
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 3.3e-87 325.9 302 78.1
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 3.3e-87 325.9 310 60.6
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 5.6e-87 325.1 298 61.1
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 1.3e-86 323.9 301 64.8
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 6.2e-86 321.6 298 60.4
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 2.4e-85 319.7 306 59.5
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 2.4e-85 319.7 306 59.5
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 3.1e-85 319.3 306 59.5
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 6.9e-85 318.2 306 59.5
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 1.2e-84 317.4 313 60.1
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 7.6e-84 314.7 301 59.5
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 8.4e-83 311.2 302 58.6
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 1.1e-82 310.8 306 72.9
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.4e-82 310.5 302 58.6
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 1.4e-82 310.5 298 61.7
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 1.9e-82 310.1 298 61.7
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.9e-82 310.1 303 66.0
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 4.2e-82 308.9 294 58.8
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 5.4e-82 308.5 298 60.7
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 9.3e-82 307.8 297 62.0
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 1.6e-81 307.0 307 58.6
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 2.7e-81 306.2 297 76.1
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 4.6e-81 305.4 295 74.9
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 4.6e-81 305.4 307 56.7
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 6.0e-81 305.1 299 56.9
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 6.0e-81 305.1 298 61.1
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 1.0e-80 304.3 298 57.7
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 3.9e-80 302.4 299 56.9
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 5.1e-80 302.0 296 56.1
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 5.1e-80 302.0 339 54.6
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 8.7e-80 301.2 300 62.3
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 1.1e-79 300.8 300 61.3
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 1.9e-79 300.1 296 55.7
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 2.5e-79 299.7 298 58.4
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 3.3e-79 299.3 313 57.2
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 5.6e-79 298.5 296 58.8
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 7.4e-79 298.1 298 59.4
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 1.3e-78 297.4 297 56.9
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 1.6e-78 297.0 297 56.9
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 2.8e-78 296.2 317 55.5
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 3.6e-78 295.8 297 55.2
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 6.2e-78 295.0 298 56.4
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 1.1e-77 294.3 308 58.8
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 1.8e-77 293.5 253 64.4
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 3.1e-77 292.7 301 55.1
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 3.1e-77 292.7 301 55.1
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 5.3e-77 292.0 292 58.6
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 6.9e-77 291.6 301 56.1
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 9.0e-77 291.2 313 55.0
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 9.0e-77 291.2 303 53.8
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 2.0e-76 290.0 301 54.2
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 3.4e-76 289.3 308 69.2
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 3.4e-76 289.3 297 55.2
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 5.8e-76 288.5 309 55.3
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 7.6e-76 288.1 299 55.2
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 6.4e-75 285.0 309 58.3
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 4.2e-74 282.3 316 57.3
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 2.7e-73 279.6 317 52.4
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 6.0e-73 278.5 317 52.1
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 6.0e-73 278.5 317 52.1
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 6.0e-73 278.5 317 52.1
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 6.0e-73 278.5 317 52.1
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 1.0e-72 277.7 317 51.1
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 2.3e-72 276.6 317 51.7
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 3.9e-72 275.8 308 53.2
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 1.1e-71 274.2 316 51.3
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 1.1e-71 274.2 286 60.8
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 2.5e-71 273.1 317 51.7
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 3.3e-71 272.7 317 51.4
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 7.4e-71 271.6 310 51.9
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 1.6e-70 270.4 318 51.3
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 3.7e-70 269.2 298 55.0
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 1.4e-69 267.3 313 50.2
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 3.1e-69 266.2 303 54.5
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 2.6e-68 263.1 178 77.5
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 1.3e-67 260.8 299 51.2
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 1.7e-67 260.4 297 53.9
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 3.9e-64 249.2 299 49.5
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 3.7e-62 242.7 265 70.6
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 8.2e-62 241.5 301 65.1
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 1.4e-61 240.7 296 56.8
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 2.6e-60 236.5 266 50.0
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 2.6e-60 236.5 310 50.3
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 3.4e-60 236.1 267 51.3
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 1.1e-58 231.1 178 68.5
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 7.9e-57 224.9 259 49.4
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.3e-55 219.5 261 51.3
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 3.7e-54 216.1 281 48.0
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 7.7e-52 208.4 305 44.6
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 5.5e-50 202.2 302 60.3
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 6.1e-49 198.7 299 45.5
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 6.9e-45 185.3 136 71.3
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 1.0e-40 171.4 269 39.8
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 1.0e-40 171.4 279 40.5
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 9.7e-39 164.9 231 44.2
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 4.5e-36 156.0 304 35.9
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 5.0e-35 152.5 300 36.0
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 6.5e-35 152.1 121 66.9
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 2.5e-34 150.2 264 37.9
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 2.7e-33 146.7 188 52.7
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 3.0e-32 143.3 128 62.5
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 1.2e-31 141.4 297 34.7
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 5.7e-31 139.0 208 47.6
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 1.3e-30 137.9 121 61.2
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 8.2e-30 135.2 112 68.8
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 2.0e-28 130.6 178 51.1
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.8e-27 126.3 178 43.8
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.9e-26 124.0 178 43.3
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 1.4e-21 107.8 157 42.7
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 5.9e-20 102.4 309 32.7
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 2.3e-19 100.5 97 52.6
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.2e-17 94.7 59 76.3
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 1.5e-15 87.8 71 74.6
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 1.1e-13 81.6 71 63.4
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 3.5e-12 76.6 150 34.7
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 5.9e-12 75.9 79 58.2
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 5.9e-12 75.9 79 60.8
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 7.8e-12 75.5 75 61.3
DCAR_022594 Daucus carota HOM05D000974 ORTHO05D007456 1.9e-10 70.9 65 63.1
Nn3g19050 Nelumbo nucifera HOM05D000974 ORTHO05D007456 2.6e-07 60.5 63 54.0


User provided reference genes

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