Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.6e-83 312.8 163 100.0
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 7.0e-55 217.6 163 73.6
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.2e-54 216.9 163 73.0
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 4.8e-48 194.9 163 63.2
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 2.0e-38 162.9 167 60.5
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 2.3e-34 149.4 164 52.4
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 8.3e-32 141.0 155 52.3
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 3.1e-31 139.0 167 52.1
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 3.1e-31 139.0 168 48.8
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 4.1e-31 138.7 183 51.9
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 5.4e-31 138.3 172 51.7
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 7.0e-31 137.9 164 50.6
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 3.5e-30 135.6 173 51.4
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 7.7e-30 134.4 173 49.7
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 1.3e-29 133.7 171 51.5
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 1.7e-29 133.3 166 48.8
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 2.3e-29 132.9 163 53.4
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 2.9e-29 132.5 173 49.7
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 3.8e-29 132.1 163 53.4
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 6.6e-29 131.3 169 47.3
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 8.6e-29 131.0 173 49.1
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 8.6e-29 131.0 171 50.9
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 2.5e-28 129.4 155 51.0
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 3.3e-28 129.0 172 48.8
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 3.3e-28 129.0 169 51.5
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 7.2e-28 127.9 171 46.2
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 9.5e-28 127.5 165 44.8
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 1.2e-27 127.1 162 50.0
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 1.6e-27 126.7 172 50.6
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 6.1e-27 124.8 159 47.8
Migut.B01687 Erythranthe guttata HOM05D007580 ORTHO05D009620 1.8e-26 123.2 167 51.5
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 4.0e-26 122.1 156 48.1
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 5.2e-26 121.7 157 49.0
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 5.2e-26 121.7 157 49.0
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 6.8e-26 121.3 156 48.1
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 1.2e-25 120.6 158 50.6
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.5e-25 120.2 157 48.4
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 1.5e-25 120.2 187 46.5
PSO782G1514 Papaver somniferum HOM05D007580 ORTHO05D009620 2.0e-25 119.8 188 46.3
PSO478G4117 Papaver somniferum HOM05D007580 ORTHO05D009620 2.6e-25 119.4 187 46.0
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 4.4e-25 118.6 165 47.3
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 4.4e-25 118.6 158 49.4
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 4.4e-25 118.6 164 45.1
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 5.7e-25 118.2 179 48.0
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 1.1e-23 114.0 189 45.0
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 1.1e-23 114.0 166 44.6
MBI12_g06406_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 1.8e-23 113.2 158 50.0
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 1.8e-23 113.2 158 44.9
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 2.4e-23 112.8 157 43.3
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 2.4e-23 112.8 161 46.0
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 4.1e-23 112.1 154 45.5
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 7.0e-23 111.3 158 47.5
MBI12_g45243_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 1.6e-22 110.2 158 48.1
CARHR000490 Cardamine hirsuta HOM05D007580 ORTHO05D009620 2.7e-22 109.4 158 43.0
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 5.9e-22 108.2 171 41.5
Carub.0001s0037 Capsella rubella HOM05D007580 ORTHO05D009620 1.0e-21 107.5 161 42.2
Cpa.g.sc18.198 Carica papaya HOM05D007580 ORTHO05D009620 1.0e-21 107.5 140 50.0
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 1.7e-21 106.7 157 44.6
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 2.9e-21 105.9 180 41.1
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 2.9e-21 105.9 172 41.3
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 5.0e-21 105.1 163 43.6
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 1.5e-20 103.6 160 42.5
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 3.3e-20 102.4 160 41.9
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 4.3e-20 102.1 161 42.9
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 4.3e-20 102.1 159 42.8
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 4.3e-20 102.1 166 39.8
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 7.3e-20 101.3 159 42.1
Psat0s1132g0080 Pisum sativum HOM05D007580 ORTHO05D009620 9.5e-20 100.9 172 42.4
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 1.2e-19 100.5 169 42.6
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 6.1e-19 98.2 159 40.9
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 2.3e-18 96.3 158 42.4
Nitab4.5_0010430g0050 Nicotiana tabacum HOM05D007580 ORTHO05D009620 3.1e-18 95.9 174 42.0
Peaxi162Scf00021g00055 Petunia axillaris HOM05D007580 ORTHO05D009620 3.1e-18 95.9 170 42.4
CiPaw.01G053500 Carya illinoinensis HOM05D007580 ORTHO05D009620 1.2e-17 94.0 150 44.0
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 4.4e-17 92.0 161 39.8
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 7.5e-17 91.3 157 42.7
Ca_07865_v3 Cicer arietinum L. HOM05D007580 ORTHO05D009620 9.8e-17 90.9 161 36.6
Sp1g00440 Schrenkiella parvula HOM05D007580 ORTHO05D009620 1.3e-16 90.5 161 37.9
Sc23g0003300 Simmondsia chinensis HOM05D007580 ORTHO05D009620 2.4e-15 86.3 169 39.6
C05p00230 Brassica napus HOM05D007580 ORTHO05D009620 4.1e-15 85.5 158 38.6
CiPaw.01G052900 Carya illinoinensis HOM05D007580 ORTHO05D009620 5.4e-15 85.1 141 43.3
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 5.4e-15 85.1 155 42.6
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 7.0e-15 84.7 155 41.9
Phvul.008G070400 Phaseolus vulgaris HOM05D007580 ORTHO05D009620 1.6e-14 83.6 145 38.6
ECA236G4638 Erigeron canadensis HOM05D007580 ORTHO05D009620 1.3e-13 80.5 165 37.6
SalBow3G0911 Salvia bowleyana HOM05D007580 ORTHO05D009620 2.5e-12 76.3 177 35.6
vmacro20972 Vaccinium macrocarpon HOM05D007580 ORTHO05D009620 9.5e-12 74.3 99 45.5
Glyma.09G264200 Glycine max HOM05D007580 ORTHO05D009620 6.2e-11 71.6 103 40.8
SGA_v2.0_scaffold95G28871 Striga asiatica HOM05D007580 ORTHO05D009620 1.1e-10 70.9 176 36.9
Ah.05g176020 Amaranthus hybridus HOM05D007580 ORTHO05D009620 1.5e-09 67.0 155 34.8
Lj1g0023268 Lotus japonicus HOM05D007580 ORTHO05D009620 3.4e-09 65.9 157 35.7
AUR62033366 Chenopodium quinoa HOM05D007580 ORTHO05D009620 2.9e-08 62.8 97 47.4
AUR62026657 Chenopodium quinoa HOM05D007580 ORTHO05D009620 3.7e-08 62.4 137 40.9
Os04g0521700 Oryza sativa ssp. japonica HOM05D007580 ORTHO05D009620 1.4e-07 60.5 160 33.8
Dinv32421 Davidia involucrata HOM05D007580 ORTHO05D009620 4.6e-06 55.5 122 36.1


User provided reference genes

Program Settings