Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0299 Trochodendron aralioides HOM05D067126 ORTHO05D415426 6.0e-166 587.4 291 100.0
TAR629G2350 Trochodendron aralioides HOM05D067126 ORTHO05D414459 6.2e-46 188.7 98 92.9
TAR626G1654 Trochodendron aralioides HOM05D004538 ORTHO05D006068 5.1e-16 89.4 50 84.0
TAR636G1975 Trochodendron aralioides HOM05D003781 ORTHO05D004299 1.2e-12 78.2 45 82.2
TAR633G0070 Trochodendron aralioides HOM05D003781 ORTHO05D004299 1.5e-12 77.8 43 86.0
FAN05G5379 Fragaria x ananassa HOM05D003781 ORTHO05D004299 7.1e-10 68.9 52 65.4
FAN09G0267 Fragaria x ananassa HOM05D003781 ORTHO05D004299 7.1e-10 68.9 52 65.4
FAN05G1631 Fragaria x ananassa HOM05D003781 ORTHO05D004299 9.3e-10 68.6 52 65.4
MD12G1039800 Malus domestica HOM05D003781 ORTHO05D004299 1.2e-09 68.2 45 71.1
Gohir.D09G131000 Gossypium hirsutum HOM05D003781 ORTHO05D004299 1.6e-09 67.8 43 74.4
Gorai.006G149700 Gossypium raimondii HOM05D003781 ORTHO05D004299 1.6e-09 67.8 43 74.4
MD14G1038400 Malus domestica HOM05D003781 ORTHO05D004299 1.6e-09 67.8 45 71.1
Peaxi162Scf00586g00012 Petunia axillaris HOM05D003781 ORTHO05D004299 2.1e-09 67.4 43 72.1
Eucgr.K02618 Eucalyptus grandis HOM05D003781 ORTHO05D004299 2.7e-09 67.0 43 74.4
Duzib093G1220 Durio zibethinus HOM05D003781 ORTHO05D004299 6.0e-09 65.9 43 74.4
PGR142G3230 Punica granatum HOM05D003781 ORTHO05D004299 6.0e-09 65.9 43 74.4
Dinv12337 Davidia involucrata HOM05D003781 ORTHO05D004299 1.3e-08 64.7 43 72.1
Dinv31756 Davidia involucrata HOM05D003781 ORTHO05D004299 1.3e-08 64.7 43 74.4
Haze_20190 Corylus avellana HOM05D003781 ORTHO05D004299 1.8e-08 64.3 45 66.7
Hma1.2p1_0064F.1_g034690 Hydrangea macrophylla HOM05D003781 ORTHO05D004299 2.3e-08 63.9 43 72.1
RcHm_v2.0_Chr1g0331051 Rosa chinensis HOM05D003781 ORTHO05D004299 2.3e-08 63.9 45 66.7
RcHm_v2.0_Chr3g0475861 Rosa chinensis HOM05D003781 ORTHO05D004299 2.3e-08 63.9 45 66.7
Hund10883 Selenicereus undatus HOM05D003781 ORTHO05D004299 2.3e-08 63.9 43 72.1
Nn2g14295 Nelumbo nucifera HOM05D003781 ORTHO05D004299 3.0e-08 63.5 41 70.7
CiPaw.09G020700 Carya illinoinensis HOM05D003781 ORTHO05D004299 3.9e-08 63.2 45 68.9
FAN02G2206 Fragaria x ananassa HOM05D003781 ORTHO05D004299 3.9e-08 63.2 45 64.4
Haze_19697 Corylus avellana HOM05D003781 ORTHO05D004299 5.1e-08 62.8 45 64.4
Nitab4.5_0000020g0070 Nicotiana tabacum HOM05D003781 ORTHO05D004299 5.1e-08 62.8 43 69.8
Nitab4.5_0001122g0140 Nicotiana tabacum HOM05D003781 ORTHO05D004299 5.1e-08 62.8 43 69.8
Nitab4.5_0008187g0010 Nicotiana tabacum HOM05D003781 ORTHO05D004299 5.1e-08 62.8 43 69.8
QL07p036815 Quercus lobata HOM05D003781 ORTHO05D004299 5.1e-08 62.8 45 68.9
FvH4_6g20270 Fragaria vesca HOM05D003781 ORTHO05D004299 6.7e-08 62.4 45 64.4
FAN14G3039 Fragaria x ananassa HOM05D003781 ORTHO05D004299 6.7e-08 62.4 45 64.4
Atru.chr8.1371 Acer truncatum HOM05D003781 ORTHO05D004299 8.7e-08 62.0 43 67.4
QL04p046781 Quercus lobata HOM05D003781 ORTHO05D004299 8.7e-08 62.0 45 68.9
Solyc01g110330.3 Solanum lycopersicum HOM05D003781 ORTHO05D004299 8.7e-08 62.0 43 69.8
CSS0029856 Camellia sinensis var. sinensis HOM05D003781 ORTHO05D004299 1.1e-07 61.6 43 67.4
MELO3C009536.2 Cucumis melo HOM05D003781 ORTHO05D004299 1.1e-07 61.6 44 63.6
Potri.016G070800 Populus trichocarpa HOM05D003781 ORTHO05D004299 1.1e-07 61.6 43 67.4
Prupe.7G095100 Prunus persica HOM05D003781 ORTHO05D004299 1.1e-07 61.6 43 72.1
ClCG10G018370 Citrullus lanatus HOM05D003781 ORTHO05D004299 1.5e-07 61.2 43 67.4
Sabra16G0070900 Salix brachista HOM05D003781 ORTHO05D004299 1.5e-07 61.2 43 67.4
Sabra16G0073100 Salix brachista HOM05D003781 ORTHO05D004299 1.5e-07 61.2 43 67.4
arahy.Tifrunner.gnm1.ann1.WYX60D Arachis hypogaea HOM05D003781 ORTHO05D004299 1.9e-07 60.8 92 40.2
Ciclev10012131m.g Citrus clementina HOM05D003781 ORTHO05D004299 1.9e-07 60.8 43 69.8
Cc06_g06510 Coffea canephora HOM05D003781 ORTHO05D004299 1.9e-07 60.8 43 60.5
Sopen01g052480 Solanum pennellii HOM05D003781 ORTHO05D004299 1.9e-07 60.8 43 67.4
TWI53G0607 Tripterygium wilfordii HOM05D003781 ORTHO05D004299 1.9e-07 60.8 42 73.8
CAN.G170.93 Capsicum annuum HOM05D003781 ORTHO05D004299 2.5e-07 60.5 43 65.1
CsaV3_3G037920 Cucumis sativus L. HOM05D003781 ORTHO05D004299 3.3e-07 60.1 43 65.1
arahy.Tifrunner.gnm1.ann1.GQX3NW Arachis hypogaea HOM05D003781 ORTHO05D004299 4.3e-07 59.7 92 40.2
GSVIVG01037869001 Vitis vinifera HOM05D003781 ORTHO05D004299 4.3e-07 59.7 42 69.0
PGSC0003DMG400021351 Solanum tuberosum HOM05D003781 ORTHO05D004299 5.7e-07 59.3 43 62.8
TWI74G1316 Tripterygium wilfordii HOM05D003781 ORTHO05D004299 7.4e-07 58.9 43 69.8
CSS0048701 Camellia sinensis var. sinensis HOM05D003781 ORTHO05D004299 9.6e-07 58.5 43 65.1
ECA248G2654 Erigeron canadensis HOM05D003781 ORTHO05D004299 9.6e-07 58.5 43 65.1
Lj1A1051T45 Lonicera japonica HOM05D003781 ORTHO05D004299 9.6e-07 58.5 43 62.8
Nitab4.5_0002858g0040 Nicotiana tabacum HOM05D003781 ORTHO05D004299 9.6e-07 58.5 43 69.8
PGR142G3605 Punica granatum HOM05D003781 ORTHO05D004299 9.6e-07 58.5 45 60.0
Actinidia31110 Actinidia chinensis HOM05D003781 ORTHO05D004299 1.3e-06 58.2 43 62.8
AUR62036398 Chenopodium quinoa HOM05D003781 ORTHO05D004299 1.3e-06 58.2 44 59.1
Sed0000357 Sechium edule HOM05D003781 ORTHO05D004299 1.3e-06 58.2 43 65.1
Solyc01g007160.4 Solanum lycopersicum HOM05D003781 ORTHO05D004299 1.3e-06 58.2 43 62.8
QL04p047257 Quercus lobata HOM05D003781 ORTHO05D004299 1.6e-06 57.8 45 64.4
GSVIVG01029568001 Vitis vinifera HOM05D003781 ORTHO05D004299 2.1e-06 57.4 43 60.5
AUR62040627 Chenopodium quinoa HOM05D003781 ORTHO05D004299 2.8e-06 57.0 44 61.4
Thecc.05G103800 Theobroma cacao HOM05D003781 ORTHO05D004299 2.8e-06 57.0 42 69.0
Sopen01g003140 Solanum pennellii HOM05D003781 ORTHO05D004299 3.7e-06 56.6 43 60.5
SGA_v2.0_scaffold13G06629 Striga asiatica HOM05D003781 ORTHO05D004299 3.7e-06 56.6 43 67.4
CiPaw.10G017000 Carya illinoinensis HOM05D003781 ORTHO05D004299 6.2e-06 55.8 45 62.2
Lj1g0015362 Lotus japonicus HOM05D003781 ORTHO05D004299 6.2e-06 55.8 44 54.5
COL.COLO4_29580 Corchorus olitorius HOM05D004248 ORTHO05D004978 8.2e-06 55.5 43 60.5


User provided reference genes

Program Settings