Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0162 Trochodendron aralioides HOM05D007265 ORTHO05D009118 3.9e-54 214.5 109 100.0
Gorai.007G109700 Gossypium raimondii HOM05D007265 ORTHO05D009118 4.6e-10 68.2 53 75.5
CiPaw.01G077600 Carya illinoinensis HOM05D007265 ORTHO05D009118 4.3e-08 61.6 48 77.1
COL.COLO4_06226 Corchorus olitorius HOM05D007265 ORTHO05D009118 5.6e-08 61.2 45 80.0
Duzib138G0325 Durio zibethinus HOM05D007265 ORTHO05D009118 5.6e-08 61.2 45 80.0
Thecc.01G340400 Theobroma cacao HOM05D007265 ORTHO05D009118 5.6e-08 61.2 45 80.0
Gohir.D12G116700 Gossypium hirsutum HOM05D007265 ORTHO05D009118 7.3e-08 60.8 45 80.0
Solyc01g096090.4 Solanum lycopersicum HOM05D007265 ORTHO05D009118 7.3e-08 60.8 52 69.2
Gohir.A11G097900 Gossypium hirsutum HOM05D007265 ORTHO05D009118 1.2e-07 60.1 45 77.8
Gohir.D11G102600 Gossypium hirsutum HOM05D007265 ORTHO05D009118 1.2e-07 60.1 45 77.8
Manes.01G244801 Manihot esculenta HOM05D007265 ORTHO05D009118 1.2e-07 60.1 45 80.0
Nn1g00287 Nelumbo nucifera HOM05D007265 ORTHO05D009118 1.2e-07 60.1 45 77.8
Nn3g18955 Nelumbo nucifera HOM05D007265 ORTHO05D009118 1.2e-07 60.1 45 80.0
Gohir.A12G113200 Gossypium hirsutum HOM05D007265 ORTHO05D009118 1.6e-07 59.7 45 77.8
Gorai.008G126400 Gossypium raimondii HOM05D007265 ORTHO05D009118 1.6e-07 59.7 45 77.8
Duzib133G0073 Durio zibethinus HOM05D007265 ORTHO05D009118 2.1e-07 59.3 45 77.8
PGR042G1917 Punica granatum HOM05D007265 ORTHO05D009118 2.1e-07 59.3 45 77.8
MD01G1083600 Malus domestica HOM05D007265 ORTHO05D009118 2.8e-07 58.9 45 77.8
MD07G1152300 Malus domestica HOM05D007265 ORTHO05D009118 2.8e-07 58.9 45 77.8
Prupe.2G190600 Prunus persica HOM05D007265 ORTHO05D009118 2.8e-07 58.9 45 77.8
Nitab4.5_0000258g0270 Nicotiana tabacum HOM05D007265 ORTHO05D009118 3.6e-07 58.5 45 77.8
Nitab4.5_0003865g0020 Nicotiana tabacum HOM05D007265 ORTHO05D009118 3.6e-07 58.5 45 77.8
Oeu007878.1 Olea europaea HOM05D007265 ORTHO05D009118 3.6e-07 58.5 45 77.8
SalBow5G3999 Salvia bowleyana HOM05D002476 ORTHO05D002652 3.6e-07 58.5 57 61.4
vmacro13170 Vaccinium macrocarpon HOM05D007265 ORTHO05D009118 3.6e-07 58.5 45 77.8
CSS0038215 Camellia sinensis var. sinensis HOM05D007265 ORTHO05D009118 4.7e-07 58.2 45 77.8
CANSAT56G3703 Cannabis sativa HOM05D007265 ORTHO05D009118 4.7e-07 58.2 46 76.1
Manes.05G021500 Manihot esculenta HOM05D007265 ORTHO05D009118 4.7e-07 58.2 45 77.8
arahy.Tifrunner.gnm1.ann1.PH1UFL Arachis hypogaea HOM05D007265 ORTHO05D009118 6.2e-07 57.8 36 88.9
Sed0002056 Sechium edule HOM05D007265 ORTHO05D009118 6.2e-07 57.8 45 77.8
MSTRG.17355 Avicennia marina HOM05D007265 ORTHO05D009118 8.0e-07 57.4 45 77.8
Ciclev10023834m.g Citrus clementina HOM05D007265 ORTHO05D009118 8.0e-07 57.4 57 61.4
HPP92_020189 Vanilla planifolia HOM05D004435 ORTHO05D005103 8.0e-07 57.4 51 64.7
arahy.Tifrunner.gnm1.ann1.4N8QKH Arachis hypogaea HOM05D007265 ORTHO05D009118 1.1e-06 57.0 38 86.8
Cc02_g39560 Coffea canephora HOM05D007265 ORTHO05D009118 1.1e-06 57.0 45 75.6
Sc01g0002550 Simmondsia chinensis HOM05D007265 ORTHO05D009118 1.1e-06 57.0 45 73.3
Nitab4.5_0001763g0020 Nicotiana tabacum HOM05D007265 ORTHO05D009118 1.4e-06 56.6 45 75.6
Oeu008708.1 Olea europaea HOM05D007265 ORTHO05D009118 1.4e-06 56.6 45 73.3
Sopen01g039810 Solanum pennellii HOM05D007265 ORTHO05D009118 1.4e-06 56.6 46 73.9
PGSC0003DMG400000233 Solanum tuberosum HOM05D007265 ORTHO05D009118 1.4e-06 56.6 45 75.6
AT2G46540 Arabidopsis thaliana HOM05D007265 ORTHO05D009118 1.8e-06 56.2 45 73.3
BcaC02g12671 Brassica carinata HOM05D007265 ORTHO05D009118 1.8e-06 56.2 45 73.3
BcaC02g12679 Brassica carinata HOM05D007265 ORTHO05D009118 1.8e-06 56.2 45 73.3
A05p01230 Brassica napus HOM05D007265 ORTHO05D009118 1.8e-06 56.2 45 73.3
C04p01380 Brassica napus HOM05D007265 ORTHO05D009118 1.8e-06 56.2 45 73.3
BolC4t21791H Brassica oleracea HOM05D007265 ORTHO05D009118 1.8e-06 56.2 45 73.3
BraA05t19124Z Brassica rapa HOM05D007265 ORTHO05D009118 1.8e-06 56.2 45 73.3
Carub.0004s2926 Capsella rubella HOM05D007265 ORTHO05D009118 1.8e-06 56.2 45 73.3
HanXRQChr16g0521331 Helianthus annuus HOM05D007265 ORTHO05D009118 1.8e-06 56.2 45 73.3
Lsat_1_v5_gn_3_126500 Lactuca sativa HOM05D007265 ORTHO05D009118 1.8e-06 56.2 45 71.1
PSO063G4371 Papaver somniferum HOM05D007265 ORTHO05D009118 1.8e-06 56.2 45 73.3
Potri.002G173101 Populus trichocarpa HOM05D007265 ORTHO05D009118 1.8e-06 56.2 45 73.3
Sp4g28590 Schrenkiella parvula HOM05D007265 ORTHO05D009118 1.8e-06 56.2 45 73.3
ATR0602G127 Amborella trichopoda HOM05D007265 ORTHO05D009118 2.3e-06 55.8 45 73.3
AL4G45970 Arabidopsis lyrata HOM05D007265 ORTHO05D009118 2.3e-06 55.8 45 71.1
ClCG06G002640 Citrullus lanatus HOM05D007265 ORTHO05D009118 2.3e-06 55.8 45 75.6
DCAR_005402 Daucus carota HOM05D007265 ORTHO05D009118 2.3e-06 55.8 45 71.1
Hma1.2p1_0390F.1_g142620 Hydrangea macrophylla HOM05D007265 ORTHO05D009118 2.3e-06 55.8 45 73.3
TAR374G1528 Trochodendron aralioides HOM05D007265 ORTHO05D009118 2.3e-06 55.8 42 78.6
BcaC02g07039 Brassica carinata HOM05D007265 ORTHO05D009118 3.1e-06 55.5 45 73.3
A04p34450 Brassica napus HOM05D007265 ORTHO05D009118 3.1e-06 55.5 45 73.3
BraA04t18903Z Brassica rapa HOM05D007265 ORTHO05D009118 3.1e-06 55.5 45 73.3
Glyma.03G258500 Glycine max HOM05D007265 ORTHO05D009118 3.1e-06 55.5 38 84.2
Glyma.19G257100 Glycine max HOM05D007265 ORTHO05D009118 3.1e-06 55.5 38 84.2
PSO170G4391 Papaver somniferum HOM05D007265 ORTHO05D009118 3.1e-06 55.5 45 73.3
MELO3C022263.2 Cucumis melo HOM05D007265 ORTHO05D009118 4.0e-06 55.1 45 73.3
Lj7E499T0 Lonicera japonica HOM05D007265 ORTHO05D009118 4.0e-06 55.1 45 71.1
Phvul.006G114500 Phaseolus vulgaris HOM05D007265 ORTHO05D009118 4.0e-06 55.1 38 84.2
Atru.chr5.686 Acer truncatum HOM05D007265 ORTHO05D009118 5.2e-06 54.7 45 71.1
Psat3g174080 Pisum sativum HOM05D007265 ORTHO05D009118 5.2e-06 54.7 37 83.8
Aa31LG1G27910 Aethionema arabicum HOM05D007265 ORTHO05D009118 6.8e-06 54.3 45 68.9
MBI07_g24775_MAGBIO Magnolia biondii HOM05D007265 ORTHO05D009118 6.8e-06 54.3 45 71.1
Sabra02G0140200 Salix brachista HOM05D007265 ORTHO05D009118 6.8e-06 54.3 45 68.9
Lsat_1_v5_gn_4_39661 Lactuca sativa HOM05D007265 ORTHO05D009118 8.9e-06 53.9 45 66.7


User provided reference genes

Program Settings