Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0135 Trochodendron aralioides HOM05D004155 ORTHO05D004837 1.6e-124 449.5 240 100.0
TAR374G0401 Trochodendron aralioides HOM05D004155 ORTHO05D004837 6.1e-100 367.9 231 84.8
TAR374G0168 Trochodendron aralioides HOM05D004155 ORTHO05D004837 1.8e-99 366.3 231 84.4
Nn6g33959 Nelumbo nucifera HOM05D004155 ORTHO05D004837 1.2e-95 353.6 231 82.3
GSVIVG01001328001 Vitis vinifera HOM05D004155 ORTHO05D004837 6.8e-91 337.8 231 78.4
Aqoxy5G03883 Aquilegia oxysepala HOM05D004155 ORTHO05D004837 1.5e-90 336.7 236 78.0
Haze_07913 Corylus avellana HOM05D004155 ORTHO05D004837 1.4e-88 330.1 233 76.0
Prupe.5G069700 Prunus persica HOM05D004155 ORTHO05D004837 1.8e-88 329.7 231 75.8
Gohir.A08G170500 Gossypium hirsutum HOM05D004155 ORTHO05D004837 3.2e-88 328.9 233 75.5
Hma1.2p1_0316F.1_g123160 Hydrangea macrophylla HOM05D004155 ORTHO05D004837 5.4e-88 328.2 232 74.6
Gohir.D08G188700 Gossypium hirsutum HOM05D004155 ORTHO05D004837 7.0e-88 327.8 233 75.1
Thecc.03G251400 Theobroma cacao HOM05D004155 ORTHO05D004837 7.0e-88 327.8 233 75.5
Cfa012719 Carpinus fangiana HOM05D004155 ORTHO05D004837 1.6e-87 326.6 233 75.1
Gorai.004G198700 Gossypium raimondii HOM05D004155 ORTHO05D004837 2.0e-87 326.2 233 74.7
CSS0005110 Camellia sinensis var. sinensis HOM05D004155 ORTHO05D004837 1.7e-86 323.2 234 76.5
CSS0021878 Camellia sinensis var. sinensis HOM05D004155 ORTHO05D004837 1.7e-86 323.2 234 76.5
CiPaw.12G052800 Carya illinoinensis HOM05D004155 ORTHO05D004837 2.3e-86 322.8 233 74.2
Actinidia22301 Actinidia chinensis HOM05D004155 ORTHO05D004837 3.0e-86 322.4 231 75.3
MD06G1058700 Malus domestica HOM05D004155 ORTHO05D004837 3.9e-86 322.0 233 74.2
Duzib068G1244 Durio zibethinus HOM05D004155 ORTHO05D004837 6.6e-86 321.2 233 73.8
Gohir.D12G219500 Gossypium hirsutum HOM05D004155 ORTHO05D004837 1.1e-85 320.5 233 73.0
Medtr4g100930 Medicago truncatula HOM05D004155 ORTHO05D004837 1.1e-85 320.5 233 75.1
ClCG10G002690 Citrullus lanatus HOM05D004155 ORTHO05D004837 1.5e-85 320.1 231 74.5
Duzib136G0003 Durio zibethinus HOM05D004155 ORTHO05D004837 1.9e-85 319.7 234 73.1
Gorai.008G235200 Gossypium raimondii HOM05D004155 ORTHO05D004837 7.3e-85 317.8 233 72.5
MELO3C013940.2 Cucumis melo HOM05D004155 ORTHO05D004837 1.2e-84 317.0 231 74.0
COL.COLO4_37174 Corchorus olitorius HOM05D004155 ORTHO05D004837 1.6e-84 316.6 250 69.6
Gohir.A12G217000 Gossypium hirsutum HOM05D004155 ORTHO05D004837 2.1e-84 316.2 233 72.5
MBI04_g09499_MAGBIO Magnolia biondii HOM05D004155 ORTHO05D004837 2.1e-84 316.2 245 72.7
Atru.chr9.1312 Acer truncatum HOM05D004155 ORTHO05D004837 3.6e-84 315.5 233 72.1
Cc08_g12420 Coffea canephora HOM05D004155 ORTHO05D004837 8.0e-84 314.3 231 72.7
QL12p012142 Quercus lobata HOM05D004155 ORTHO05D004837 8.0e-84 314.3 231 73.6
Lj2A217G31 Lonicera japonica HOM05D004155 ORTHO05D004837 1.4e-83 313.5 231 73.2
TWI60G0516 Tripterygium wilfordii HOM05D004155 ORTHO05D004837 1.8e-83 313.2 232 72.8
TWI81G0233 Tripterygium wilfordii HOM05D004155 ORTHO05D004837 2.3e-83 312.8 232 72.4
Ca_21966_v3 Cicer arietinum L. HOM05D004155 ORTHO05D004837 5.2e-83 311.6 233 73.0
Glyma.17G141800 Glycine max HOM05D004155 ORTHO05D004837 1.2e-82 310.5 232 73.7
Potri.003G077000 Populus trichocarpa HOM05D004155 ORTHO05D004837 1.2e-82 310.5 237 70.9
Glyma.05G059400 Glycine max HOM05D004155 ORTHO05D004837 1.5e-82 310.1 231 73.2
Ciclev10021960m.g Citrus clementina HOM05D004155 ORTHO05D004837 2.0e-82 309.7 232 72.4
TPR.G11991 Trifolium pratense HOM05D004155 ORTHO05D004837 2.0e-82 309.7 235 73.2
CsaV3_3G002720 Cucumis sativus L. HOM05D004155 ORTHO05D004837 2.6e-82 309.3 230 73.0
Sopen06g020840 Solanum pennellii HOM05D004155 ORTHO05D004837 9.8e-82 307.4 232 71.1
Solyc06g060720.3 Solanum lycopersicum HOM05D004155 ORTHO05D004837 1.7e-81 306.6 232 71.1
PGSC0003DMG400011880 Solanum tuberosum HOM05D004155 ORTHO05D004837 1.7e-81 306.6 232 71.1
Sed0004864 Sechium edule HOM05D004155 ORTHO05D004837 4.9e-81 305.1 234 72.6
Oeu040215.1 Olea europaea HOM05D004155 ORTHO05D004837 8.3e-81 304.3 243 71.6
Lj4g0023659 Lotus japonicus HOM05D004155 ORTHO05D004837 1.4e-80 303.5 231 72.7
VMungo0251G3701 Vigna mungo HOM05D004155 ORTHO05D004837 1.4e-80 303.5 231 72.7
HanXRQChr03g0088551 Helianthus annuus HOM05D004155 ORTHO05D004837 1.9e-80 303.1 233 71.7
EL10Ac9g21736 Beta vulgaris HOM05D004155 ORTHO05D004837 3.2e-80 302.4 235 69.4
Sc01g0008440 Simmondsia chinensis HOM05D004155 ORTHO05D004837 5.4e-80 301.6 232 71.6
Phvul.003G220600 Phaseolus vulgaris HOM05D004155 ORTHO05D004837 1.2e-79 300.4 231 72.3
Potri.001G157900 Populus trichocarpa HOM05D004155 ORTHO05D004837 1.2e-79 300.4 239 66.5
RcHm_v2.0_Chr7g0203271 Rosa chinensis HOM05D004155 ORTHO05D004837 1.6e-79 300.1 232 72.0
Manes.02G039600 Manihot esculenta HOM05D004155 ORTHO05D004837 2.0e-79 299.7 236 69.1
DCAR_006831 Daucus carota HOM05D004155 ORTHO05D004837 2.7e-79 299.3 233 71.2
Manes.01G080600 Manihot esculenta HOM05D004155 ORTHO05D004837 2.7e-79 299.3 237 70.9
Ah.11g040940 Amaranthus hybridus HOM05D004155 ORTHO05D004837 3.5e-79 298.9 240 67.1
Ah.11g040960 Amaranthus hybridus HOM05D004155 ORTHO05D004837 3.5e-79 298.9 236 68.2
Duzib084G0799 Durio zibethinus HOM05D004155 ORTHO05D004837 4.6e-79 298.5 233 70.4
CAN.G62.43 Capsicum annuum HOM05D004155 ORTHO05D004837 1.0e-78 297.4 234 69.2
Psat4g072240 Pisum sativum HOM05D004155 ORTHO05D004837 1.7e-78 296.6 233 69.5
PGSC0003DMG400004812 Solanum tuberosum HOM05D004155 ORTHO05D004837 1.7e-78 296.6 232 69.0
arahy.Tifrunner.gnm1.ann1.FN76PE Arachis hypogaea HOM05D004155 ORTHO05D004837 2.3e-78 296.2 237 70.0
PSO782G0374 Papaver somniferum HOM05D004155 ORTHO05D004837 3.0e-78 295.8 242 71.1
SalBow5G4949 Salvia bowleyana HOM05D004155 ORTHO05D004837 3.9e-78 295.4 247 67.6
FAN08G3385 Fragaria x ananassa HOM05D004155 ORTHO05D004837 5.0e-78 295.0 232 71.1
FAN18G2873 Fragaria x ananassa HOM05D004155 ORTHO05D004837 5.0e-78 295.0 232 71.1
FAN18G3217 Fragaria x ananassa HOM05D004155 ORTHO05D004837 5.0e-78 295.0 232 71.1
FAN18G4261 Fragaria x ananassa HOM05D004155 ORTHO05D004837 5.0e-78 295.0 232 71.1
arahy.Tifrunner.gnm1.ann1.9Q5ZL0 Arachis hypogaea HOM05D004155 ORTHO05D004837 6.6e-78 294.7 237 69.6
Nitab4.5_0005960g0040 Nicotiana tabacum HOM05D004155 ORTHO05D004837 6.6e-78 294.7 232 69.0
PSO063G2044 Papaver somniferum HOM05D004155 ORTHO05D004837 6.6e-78 294.7 242 70.7
FvH4_5g18890 Fragaria vesca HOM05D004155 ORTHO05D004837 8.6e-78 294.3 232 71.1
THA.LOC104820827 Tarenaya hassleriana HOM05D004155 ORTHO05D004837 1.1e-77 293.9 225 69.3
Lalb_Chr09g0330111 Lupinus albus HOM05D004155 ORTHO05D004837 1.5e-77 293.5 236 71.6
Oeu026407.1 Olea europaea HOM05D004155 ORTHO05D004837 1.9e-77 293.1 243 69.1
CAN.G1058.24 Capsicum annuum HOM05D004155 ORTHO05D004837 4.3e-77 292.0 232 67.7
CANSAT21G0249 Cannabis sativa HOM05D004155 ORTHO05D004837 9.5e-77 290.8 232 70.3
FAN04G2128 Fragaria x ananassa HOM05D004155 ORTHO05D004837 1.2e-76 290.4 232 70.7
FAN13G1725 Fragaria x ananassa HOM05D004155 ORTHO05D004837 1.2e-76 290.4 232 70.3
Lalb_Chr16g0386681 Lupinus albus HOM05D004155 ORTHO05D004837 1.2e-76 290.4 238 69.3
Dinv21638 Davidia involucrata HOM05D004155 ORTHO05D004837 1.6e-76 290.0 204 75.0
SGA_v2.0_scaffold120G32880 Striga asiatica HOM05D004155 ORTHO05D004837 1.6e-76 290.0 241 68.5
Eucgr.I02746 Eucalyptus grandis HOM05D004155 ORTHO05D004837 4.7e-76 288.5 233 70.4
THA.LOC104802903 Tarenaya hassleriana HOM05D004155 ORTHO05D004837 6.2e-76 288.1 228 66.7
CARHR077510 Cardamine hirsuta HOM05D004155 ORTHO05D004837 8.1e-76 287.7 232 66.4
Lsat_1_v5_gn_6_91040 Lactuca sativa HOM05D004155 ORTHO05D004837 1.1e-75 287.3 249 65.5
MSTRG.25524 Avicennia marina HOM05D004155 ORTHO05D004837 2.3e-75 286.2 242 67.4
PGR142G3296 Punica granatum HOM05D004155 ORTHO05D004837 2.3e-75 286.2 230 69.1
Thhalv10014511m.g Eutrema salsugineum HOM05D004155 ORTHO05D004837 4.0e-75 285.4 229 65.9
BcaB08g36763 Brassica carinata HOM05D004155 ORTHO05D004837 5.2e-75 285.0 229 63.8
Sp3g02480 Schrenkiella parvula HOM05D004155 ORTHO05D004837 6.8e-75 284.6 232 65.5
A10p21850 Brassica napus HOM05D004155 ORTHO05D004837 2.0e-74 283.1 228 64.5
C09p59610 Brassica napus HOM05D004155 ORTHO05D004837 2.0e-74 283.1 228 64.9
DCAR_008491 Daucus carota HOM05D004155 ORTHO05D004837 2.0e-74 283.1 234 65.8
Aa31LG11G12130 Aethionema arabicum HOM05D004155 ORTHO05D004837 3.4e-74 282.3 227 64.3
AL6G28640 Arabidopsis lyrata HOM05D004155 ORTHO05D004837 3.4e-74 282.3 229 64.2
AT5G17550 Arabidopsis thaliana HOM05D004155 ORTHO05D004837 4.4e-74 282.0 229 64.2
Carub.0006s1579 Capsella rubella HOM05D004155 ORTHO05D004837 9.8e-74 280.8 229 64.2
Sp6g26670 Schrenkiella parvula HOM05D004155 ORTHO05D004837 9.8e-74 280.8 229 64.2
Nitab4.5_0000618g0060 Nicotiana tabacum HOM05D004155 ORTHO05D004837 1.3e-73 280.4 215 68.8
BolC9t58800H Brassica oleracea HOM05D004155 ORTHO05D004837 2.2e-73 279.6 236 64.0
BcaC04g18780 Brassica carinata HOM05D004155 ORTHO05D004837 2.9e-73 279.3 228 64.0
BraA03t12501Z Brassica rapa HOM05D004155 ORTHO05D004837 2.9e-73 279.3 232 65.9
BraA10t44245Z Brassica rapa HOM05D004155 ORTHO05D004837 2.9e-73 279.3 228 64.0
CARHR195630 Cardamine hirsuta HOM05D004155 ORTHO05D004837 3.7e-73 278.9 229 65.1
Ah.11g040910 Amaranthus hybridus HOM05D004155 ORTHO05D004837 6.4e-73 278.1 235 64.3
MSTRG.12099 Avicennia marina HOM05D004155 ORTHO05D004837 6.4e-73 278.1 241 66.4
CDE11G1226 Ceratophyllum demersum HOM05D004155 ORTHO05D004837 3.2e-72 275.8 232 64.7
Peaxi162Scf00174g00143 Petunia axillaris HOM05D004155 ORTHO05D004837 4.1e-72 275.4 229 66.4
Carub.0003s0263 Capsella rubella HOM05D004155 ORTHO05D004837 9.2e-72 274.2 230 64.8
ECA240G3289 Erigeron canadensis HOM05D004155 ORTHO05D004837 9.2e-72 274.2 235 68.1
SGA_v2.0_scaffold146G36157 Striga asiatica HOM05D004155 ORTHO05D004837 1.2e-71 273.9 236 66.5
Aa31LG5G14010 Aethionema arabicum HOM05D004155 ORTHO05D004837 2.7e-71 272.7 227 63.0
BcaB04g19367 Brassica carinata HOM05D004155 ORTHO05D004837 4.6e-71 271.9 236 62.3
CDE09G1113 Ceratophyllum demersum HOM05D004155 ORTHO05D004837 4.6e-71 271.9 233 64.8
Nn1g00995 Nelumbo nucifera HOM05D004155 ORTHO05D004837 4.6e-71 271.9 232 67.2
AT3G03490 Arabidopsis thaliana HOM05D004155 ORTHO05D004837 3.0e-70 269.2 233 62.7
Sabra03G0047400 Salix brachista HOM05D004155 ORTHO05D004837 3.9e-70 268.9 297 54.2
AUR62016725 Chenopodium quinoa HOM05D004155 ORTHO05D004837 1.1e-69 267.3 235 64.3
AL3G13170 Arabidopsis lyrata HOM05D004155 ORTHO05D004837 2.5e-69 266.2 231 62.8
Migut.A00944 Erythranthe guttata HOM05D004155 ORTHO05D004837 5.6e-69 265.0 223 68.2
HanXRQChr06g0164361 Helianthus annuus HOM05D004155 ORTHO05D004837 7.3e-69 264.6 228 66.7
BcaC01g04400 Brassica carinata HOM05D004155 ORTHO05D004837 2.8e-68 262.7 230 62.6
C03p40540 Brassica napus HOM05D004155 ORTHO05D004837 2.8e-68 262.7 230 62.6
BolC3t16319H Brassica oleracea HOM05D004155 ORTHO05D004837 2.8e-68 262.7 230 62.6
A03p33290 Brassica napus HOM05D004155 ORTHO05D004837 8.1e-68 261.2 230 62.6
Sabra01G0133600 Salix brachista HOM05D004155 ORTHO05D004837 8.1e-68 261.2 305 51.8
unitig_37.g12342 Utricularia gibba HOM05D004155 ORTHO05D004837 2.2e-65 253.1 227 62.6
Nitab4.5_0000312g0050 Nicotiana tabacum HOM05D004155 ORTHO05D004837 3.8e-65 252.3 205 66.8
Nitab4.5_0001076g0090 Nicotiana tabacum HOM05D004155 ORTHO05D004837 2.4e-64 249.6 189 69.3
HPP92_007424 Vanilla planifolia HOM05D004155 ORTHO05D004837 9.2e-64 247.7 242 59.9
ATR0317G023 Amborella trichopoda HOM05D004155 ORTHO05D004837 1.2e-63 247.3 231 60.6
Ah.11g040970 Amaranthus hybridus HOM05D004155 ORTHO05D004837 1.7e-62 243.4 232 59.1
Rhsim02G0215900 Rhododendron simsii HOM05D004155 ORTHO05D004837 3.0e-62 242.7 371 44.5
Gohir.D03G162900 Gossypium hirsutum HOM05D004155 ORTHO05D004837 3.3e-53 212.6 169 66.3
Gorai.003G171500 Gossypium raimondii HOM05D004155 ORTHO05D004837 3.3e-53 212.6 182 62.6
Os02g0661000 Oryza sativa ssp. japonica HOM05D004155 ORTHO05D004837 9.6e-53 211.1 236 54.2
Zm00001eb249680 Zea mays HOM05D004155 ORTHO05D004837 9.6e-53 211.1 231 54.1
Phvul.003G220550 Phaseolus vulgaris HOM05D004155 ORTHO05D004837 3.6e-52 209.1 131 80.9
Gohir.A03G008100 Gossypium hirsutum HOM05D004155 ORTHO05D004837 1.8e-51 206.8 169 65.7
vmacro11263 Vaccinium macrocarpon HOM05D004155 ORTHO05D004837 3.1e-51 206.1 121 84.3
Actinidia13193 Actinidia chinensis HOM05D004155 ORTHO05D004837 5.8e-50 201.8 136 75.7
Pp3c2_16800 Physcomitrium patens HOM05D004155 ORTHO05D004837 3.8e-49 199.1 243 50.2
Zm00001eb186660 Zea mays HOM05D004155 ORTHO05D004837 1.3e-46 190.7 231 51.5
Mapoly0045s0092 Marchantia polymorpha HOM05D004155 ORTHO05D004837 1.1e-45 187.6 261 46.0
Cpa.g.sc43.156 Carica papaya HOM05D004155 ORTHO05D004837 4.3e-45 185.7 105 85.7
Ah.11g040930 Amaranthus hybridus HOM05D004155 ORTHO05D004837 2.9e-41 172.9 193 52.8
TPR.G37592 Trifolium pratense HOM05D004155 ORTHO05D004837 1.9e-37 160.2 101 77.2
Actinidia14427 Actinidia chinensis HOM05D004155 ORTHO05D004837 6.5e-33 145.2 127 65.4
AagrBONN_evm.TU.Sc2ySwM_228.1233 Anthoceros agrestis HOM05D004155 ORTHO05D004837 1.9e-32 143.7 264 38.6
CBR_g22421 Chara braunii HOM05D004155 ORTHO05D004837 8.7e-30 134.8 272 38.2
Cpa.g.sc43.157 Carica papaya HOM05D004155 ORTHO05D004837 2.4e-27 126.7 129 59.7
SMO146G0254 Selaginella moellendorffii HOM05D004155 ORTHO05D004837 2.6e-26 123.2 91 65.9
TPR.G37609 Trifolium pratense HOM05D004155 ORTHO05D004837 4.5e-26 122.5 96 69.8
SMO340G0179 Selaginella moellendorffii HOM05D004155 ORTHO05D004837 1.9e-24 117.1 91 60.4
Thhalv10015034m.g Eutrema salsugineum HOM05D004155 ORTHO05D004837 3.8e-17 92.8 93 55.9
Cre02.g119000 Chlamydomonas reinhardtii HOM05D004155 ORTHO05D004837 3.2e-16 89.7 90 47.8
PRCOL_00005614 Prasinoderma coloniale HOM05D004155 ORTHO05D004837 4.2e-16 89.4 99 39.4
PSO384G2334 Papaver somniferum HOM05D004155 ORTHO05D004837 2.7e-15 86.7 120 52.5
CAN.G1058.18 Capsicum annuum HOM05D002401 ORTHO05D007109 6.1e-15 85.5 54 74.1
arahy.Tifrunner.gnm1.ann1.Z2VGSW Arachis hypogaea HOM05D004155 ORTHO05D004837 1.4e-14 84.3 75 65.3
arahy.Tifrunner.gnm1.ann1.BEL5CJ Arachis hypogaea HOM05D004155 ORTHO05D004837 2.6e-13 80.1 75 62.7
ECA247G1153 Erigeron canadensis HOM05D004155 ORTHO05D004837 2.4e-11 73.6 92 54.3
SEGI_17945 Sequoiadendron giganteum HOM05D004155 ORTHO05D004837 6.9e-11 72.0 132 40.9
Pp3c1_22650 Physcomitrium patens HOM05D004155 ORTHO05D004837 3.4e-10 69.7 81 49.4
Cfa022446 Carpinus fangiana HOM05D004155 ORTHO05D126510 1.1e-08 64.7 153 33.3
PGSC0003DMG400045666 Solanum tuberosum HOM05D004155 ORTHO05D004837 3.2e-08 63.2 78 50.0


User provided reference genes

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