Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0065 Trochodendron aralioides HOM05D001320 ORTHO05D014204 2.5e-113 412.1 211 100.0
TAR375G0290 Trochodendron aralioides HOM05D001320 ORTHO05D002136 1.5e-54 216.9 214 60.7
TAR629G3148 Trochodendron aralioides HOM05D001320 ORTHO05D002136 1.5e-54 216.9 214 60.7
Nn1g01046 Nelumbo nucifera HOM05D001320 ORTHO05D014204 2.8e-48 196.1 218 58.3
TAR636G1008 Trochodendron aralioides HOM05D001320 ORTHO05D002136 1.6e-40 170.2 208 51.4
MBI04_g41910_MAGBIO Magnolia biondii HOM05D001320 ORTHO05D002136 4.5e-38 162.2 217 51.6
Cfa012742 Carpinus fangiana HOM05D001320 ORTHO05D002136 3.9e-34 149.1 226 45.6
Dinv43675 Davidia involucrata HOM05D001320 ORTHO05D002136 8.8e-34 147.9 210 47.1
Haze_07886 Corylus avellana HOM05D001320 ORTHO05D002136 7.4e-33 144.8 226 43.8
QL12p012621 Quercus lobata HOM05D001320 ORTHO05D002136 1.4e-31 140.6 237 45.6
CiPaw.11G152700 Carya illinoinensis HOM05D001320 ORTHO05D002136 5.3e-31 138.7 225 43.1
Dinv44121 Davidia involucrata HOM05D001320 ORTHO05D002136 3.4e-30 136.0 208 46.6
Aqoxy5G03909 Aquilegia oxysepala HOM05D001320 ORTHO05D002136 2.2e-29 133.3 230 43.9
CiPaw.13G032700 Carya illinoinensis HOM05D001320 ORTHO05D002136 2.2e-29 133.3 222 45.0
Prupe.5G072300 Prunus persica HOM05D001320 ORTHO05D002136 6.5e-29 131.7 237 42.6
FAN08G3518 Fragaria x ananassa HOM05D001320 ORTHO05D002136 1.4e-28 130.6 219 43.8
Thecc.01G382400 Theobroma cacao HOM05D001320 ORTHO05D002136 3.2e-28 129.4 228 42.5
CiPaw.14G025900 Carya illinoinensis HOM05D001320 ORTHO05D002136 5.5e-28 128.6 218 44.5
Thecc.03G253700 Theobroma cacao HOM05D001320 ORTHO05D002136 5.5e-28 128.6 229 41.0
Duzib138G0867 Durio zibethinus HOM05D001320 ORTHO05D002136 1.4e-26 124.0 234 41.5
MELO3C013947.2 Cucumis melo HOM05D001320 ORTHO05D002136 3.9e-26 122.5 218 44.5
MD04G1088100 Malus domestica HOM05D001320 ORTHO05D002136 2.0e-25 120.2 226 42.9
Duzib133G0024 Durio zibethinus HOM05D001320 ORTHO05D002136 5.7e-25 118.6 229 40.6
CsaV3_3G002800 Cucumis sativus L. HOM05D001320 ORTHO05D002136 1.7e-24 117.1 218 43.6
Duzib084G0725 Durio zibethinus HOM05D001320 ORTHO05D002136 3.7e-24 115.9 227 42.3
Cpa.g.sc29.139 Carica papaya HOM05D001320 ORTHO05D002136 4.8e-24 115.5 234 40.2
Potri.003G110800 Populus trichocarpa HOM05D001320 ORTHO05D002136 6.3e-24 115.2 220 39.1
Actinidia18728 Actinidia chinensis HOM05D001320 ORTHO05D002136 3.1e-23 112.8 198 42.4
Potri.001G122800 Populus trichocarpa HOM05D001320 ORTHO05D002136 3.1e-23 112.8 228 39.5
ClCG10G002760 Citrullus lanatus HOM05D001320 ORTHO05D002136 5.3e-23 112.1 216 42.6
COL.COLO4_12492 Corchorus olitorius HOM05D001320 ORTHO05D002136 9.1e-23 111.3 216 40.3
Dinv21621 Davidia involucrata HOM05D001320 ORTHO05D002136 1.5e-22 110.5 209 42.1
MBI04_g44457_MAGBIO Magnolia biondii HOM05D001320 ORTHO05D002136 2.0e-22 110.2 199 42.2
Actinidia12187 Actinidia chinensis HOM05D001320 ORTHO05D002136 1.3e-21 107.5 220 40.5
Duzib068G0558 Durio zibethinus HOM05D001320 ORTHO05D002136 1.3e-21 107.5 224 40.2
Manes.02G038400 Manihot esculenta HOM05D001320 ORTHO05D002136 1.3e-21 107.5 229 38.9
MD00G1043300 Malus domestica HOM05D001320 ORTHO05D002136 1.7e-21 107.1 230 41.3
Sc01g0008540 Simmondsia chinensis HOM05D001320 ORTHO05D002136 1.7e-21 107.1 216 40.7
Cc02_g24390 Coffea canephora HOM05D001320 ORTHO05D002136 2.2e-21 106.7 225 37.3
Peaxi162Scf00803g00003 Petunia axillaris HOM05D001320 ORTHO05D002136 2.2e-21 106.7 204 40.7
Sabra01G0094600 Salix brachista HOM05D001320 ORTHO05D002136 2.2e-21 106.7 220 36.8
Manes.05G048700 Manihot esculenta HOM05D001320 ORTHO05D002136 2.9e-21 106.3 213 39.4
TWI14G0097 Tripterygium wilfordii HOM05D001320 ORTHO05D002136 2.9e-21 106.3 212 40.6
FvH4_5g00020 Fragaria vesca HOM05D001320 ORTHO05D002136 1.5e-20 104.0 218 39.4
FAN18G2925 Fragaria x ananassa HOM05D001320 ORTHO05D002136 1.5e-20 104.0 218 39.4
Sopen01g036680 Solanum pennellii HOM05D001320 ORTHO05D002136 1.9e-20 103.6 207 38.2
QL04p038815 Quercus lobata HOM05D001320 ORTHO05D002136 4.2e-20 102.4 226 36.3
FAN04G0481 Fragaria x ananassa HOM05D001320 ORTHO05D002136 7.2e-20 101.7 219 39.3
TWI59G0954 Tripterygium wilfordii HOM05D001320 ORTHO05D002136 1.2e-19 100.9 211 41.2
Sed0003392 Sechium edule HOM05D001320 ORTHO05D002136 1.6e-19 100.5 215 42.3
RcHm_v2.0_Chr7g0202931 Rosa chinensis HOM05D001320 ORTHO05D002136 2.1e-19 100.1 222 38.7
Solyc01g090950.4 Solanum lycopersicum HOM05D001320 ORTHO05D002136 2.1e-19 100.1 207 37.7
arahy.Tifrunner.gnm1.ann1.56KTIF Arachis hypogaea HOM05D001320 ORTHO05D002136 3.6e-19 99.4 212 38.2
Gohir.A12G220100 Gossypium hirsutum HOM05D001320 ORTHO05D002136 3.6e-19 99.4 217 37.3
CAN.G1469.15 Capsicum annuum HOM05D001320 ORTHO05D002136 4.7e-19 99.0 212 38.2
QL04p038785 Quercus lobata HOM05D001320 ORTHO05D002136 4.7e-19 99.0 223 38.1
arahy.Tifrunner.gnm1.ann1.IIU33D Arachis hypogaea HOM05D001320 ORTHO05D002136 6.1e-19 98.6 212 37.7
FAN13G0128 Fragaria x ananassa HOM05D001320 ORTHO05D002136 1.0e-18 97.8 219 39.3
PGSC0003DMG400025973 Solanum tuberosum HOM05D001320 ORTHO05D002136 1.0e-18 97.8 203 37.9
Glyma.01G079500 Glycine max HOM05D001320 ORTHO05D002136 1.4e-18 97.4 218 40.4
TWI23G0829 Tripterygium wilfordii HOM05D001320 ORTHO05D002136 1.4e-18 97.4 210 39.5
Gohir.D12G222300 Gossypium hirsutum HOM05D001320 ORTHO05D002136 1.8e-18 97.1 215 37.7
Gorai.008G238300 Gossypium raimondii HOM05D001320 ORTHO05D002136 1.8e-18 97.1 215 37.7
Phvul.008G143400 Phaseolus vulgaris HOM05D001320 ORTHO05D002136 1.8e-18 97.1 218 40.4
Sabra03G0076900 Salix brachista HOM05D001320 ORTHO05D002136 2.3e-18 96.7 206 38.3
Ciclev10018916m.g Citrus clementina HOM05D001320 ORTHO05D002136 6.7e-18 95.1 241 38.2
Glyma.11G168219 Glycine max HOM05D001320 ORTHO05D002136 8.8e-18 94.7 220 40.9
Lj1g0000159 Lotus japonicus HOM05D001320 ORTHO05D002136 8.8e-18 94.7 215 39.5
Eucgr.E01509 Eucalyptus grandis HOM05D001320 ORTHO05D002136 1.1e-17 94.4 211 39.3
Phvul.010G072900 Phaseolus vulgaris HOM05D001320 ORTHO05D002136 1.1e-17 94.4 213 41.8
Nitab4.5_0011278g0010 Nicotiana tabacum HOM05D001320 ORTHO05D002136 1.5e-17 94.0 213 37.1
FvH4_7g11120 Fragaria vesca HOM05D001320 ORTHO05D002136 2.0e-17 93.6 207 34.8
FAN06G2625 Fragaria x ananassa HOM05D001320 ORTHO05D002136 2.0e-17 93.6 207 34.8
FAN06G2903 Fragaria x ananassa HOM05D001320 ORTHO05D002136 2.0e-17 93.6 207 34.8
VMungo0331G1322 Vigna mungo HOM05D001320 ORTHO05D002136 2.6e-17 93.2 213 40.4
CANSAT56G4337 Cannabis sativa HOM05D001320 ORTHO05D002136 3.3e-17 92.8 209 38.3
CANSAT56G3983 Cannabis sativa HOM05D001320 ORTHO05D002136 4.4e-17 92.4 209 38.8
AUR62007503 Chenopodium quinoa HOM05D001320 ORTHO05D002136 4.4e-17 92.4 224 38.8
Lalb_Chr07g0190221 Lupinus albus HOM05D001320 ORTHO05D002136 5.7e-17 92.0 215 38.6
Prupe.2G138400 Prunus persica HOM05D001320 ORTHO05D002136 7.5e-17 91.7 136 45.6
CANSAT56G4031 Cannabis sativa HOM05D001320 ORTHO05D002136 1.7e-16 90.5 209 37.8
Nitab4.5_0000859g0260 Nicotiana tabacum HOM05D001320 ORTHO05D002136 1.7e-16 90.5 201 37.3
AUR62039956 Chenopodium quinoa HOM05D001320 ORTHO05D002136 2.2e-16 90.1 209 38.3
FAN01G1998 Fragaria x ananassa HOM05D001320 ORTHO05D002136 2.2e-16 90.1 212 36.8
FAN03G3091 Fragaria x ananassa HOM05D001320 ORTHO05D002136 3.7e-16 89.4 215 36.3
Lalb_Chr12g0207931 Lupinus albus HOM05D001320 ORTHO05D002136 3.7e-16 89.4 236 36.0
Cfa011171 Carpinus fangiana HOM05D001320 ORTHO05D002136 4.8e-16 89.0 219 37.4
QL04p038841 Quercus lobata HOM05D001320 ORTHO05D002136 4.8e-16 89.0 203 36.0
FAN10G2195 Fragaria x ananassa HOM05D001320 ORTHO05D002136 6.3e-16 88.6 212 36.8
Glyma.01G136300 Glycine max HOM05D001320 ORTHO05D002136 6.3e-16 88.6 215 39.5
FAN10G1866 Fragaria x ananassa HOM05D001320 ORTHO05D002136 8.2e-16 88.2 212 36.8
Gohir.A12G094601 Gossypium hirsutum HOM05D001320 ORTHO05D002136 8.2e-16 88.2 215 36.3
VMungo1383G3366 Vigna mungo HOM05D001320 ORTHO05D002136 8.2e-16 88.2 210 41.0
MD07G1115800 Malus domestica HOM05D001320 ORTHO05D002136 1.4e-15 87.4 220 37.7
Dinv39128 Davidia involucrata HOM05D001320 ORTHO05D002136 1.8e-15 87.0 211 38.4
TPR.G5027 Trifolium pratense HOM05D001320 ORTHO05D002136 1.8e-15 87.0 216 35.6
Oeu000018.2 Olea europaea HOM05D001320 ORTHO05D002136 2.4e-15 86.7 216 39.4
Cpa.g.sc49.157 Carica papaya HOM05D001320 ORTHO05D002136 4.1e-15 85.9 227 37.9
Hund14579 Selenicereus undatus HOM05D001320 ORTHO05D002136 4.1e-15 85.9 212 37.3
CSS0037771 Camellia sinensis var. sinensis HOM05D001320 ORTHO05D002136 5.3e-15 85.5 203 38.9
CSS0048675 Camellia sinensis var. sinensis HOM05D001320 ORTHO05D002136 5.3e-15 85.5 203 38.9
Lalb_Chr07g0190241 Lupinus albus HOM05D001320 ORTHO05D002136 5.3e-15 85.5 215 37.7
Lj3g0015276 Lotus japonicus HOM05D001320 ORTHO05D002136 1.6e-14 84.0 210 35.7
CDE04G1972 Ceratophyllum demersum HOM05D001320 ORTHO05D002136 2.0e-14 83.6 218 37.2
Glyma.03G031800 Glycine max HOM05D001320 ORTHO05D002136 2.0e-14 83.6 214 37.9
Lalb_Chr13g0291841 Lupinus albus HOM05D001320 ORTHO05D002136 2.6e-14 83.2 215 35.8
Ciclev10019094m.g Citrus clementina HOM05D001320 ORTHO05D002136 4.5e-14 82.4 230 37.4
Gorai.008G106000 Gossypium raimondii HOM05D001320 ORTHO05D002136 4.5e-14 82.4 215 35.3
EL10Ac5g13052 Beta vulgaris HOM05D001320 ORTHO05D002136 5.9e-14 82.0 217 36.4
Gohir.D12G097300 Gossypium hirsutum HOM05D001320 ORTHO05D002136 7.7e-14 81.6 216 35.2
MD02G1210200 Malus domestica HOM05D001320 ORTHO05D002136 7.7e-14 81.6 226 37.2
Haze_02678 Corylus avellana HOM05D001320 ORTHO05D002136 1.0e-13 81.3 219 36.5
CDE12G0263 Ceratophyllum demersum HOM05D001320 ORTHO05D002136 1.3e-13 80.9 218 37.2
Ca_19834_v3 Cicer arietinum L. HOM05D001320 ORTHO05D002136 1.3e-13 80.9 213 38.0
VMungo0331G0016 Vigna mungo HOM05D001320 ORTHO05D002136 2.2e-13 80.1 214 36.0
MSTRG.20730 Avicennia marina HOM05D001320 ORTHO05D002136 3.8e-13 79.3 224 37.5
GSVIVG01001308001 Vitis vinifera HOM05D001320 ORTHO05D002136 3.8e-13 79.3 93 48.4
Hund11591 Selenicereus undatus HOM05D001320 ORTHO05D002136 5.0e-13 79.0 215 35.3
Ah.12g056730 Amaranthus hybridus HOM05D001320 ORTHO05D002136 8.5e-13 78.2 223 37.7
Duzib205G1927 Durio zibethinus HOM05D001320 ORTHO05D002136 1.1e-12 77.8 224 33.0
Lj3g0003192 Lotus japonicus HOM05D001320 ORTHO05D002136 1.1e-12 77.8 214 36.0
MSTRG.17163 Avicennia marina HOM05D001320 ORTHO05D002136 2.5e-12 76.6 222 36.9
Eucgr.E01510 Eucalyptus grandis HOM05D001320 ORTHO05D002136 5.5e-12 75.5 199 34.7
Oeu064173.2 Olea europaea HOM05D001320 ORTHO05D002136 1.2e-11 74.3 222 32.4
RcHm_v2.0_Chr1g0349141 Rosa chinensis HOM05D001320 ORTHO05D002136 2.7e-11 73.2 207 30.4
Sabra14G0044100 Salix brachista HOM05D001320 ORTHO05D002136 6.1e-11 72.0 215 37.7
Cc08_g12670 Coffea canephora HOM05D001320 ORTHO05D002136 1.4e-10 70.9 213 33.3
Rhsim07G0030900 Rhododendron simsii HOM05D001320 ORTHO05D002136 3.0e-10 69.7 220 34.5
Aqoxy5G03910 Aquilegia oxysepala HOM05D001320 ORTHO05D002136 4.0e-10 69.3 230 33.5
MELO3C021146.2 Cucumis melo HOM05D001320 ORTHO05D002136 1.2e-09 67.8 225 33.3
CsaV3_6G009170 Cucumis sativus L. HOM05D001320 ORTHO05D002136 2.0e-09 67.0 225 32.4
Sabra14G0044400 Salix brachista HOM05D001320 ORTHO05D002136 2.0e-09 67.0 217 34.1
Atru.chr5.254 Acer truncatum HOM05D001320 ORTHO05D002136 2.6e-09 66.6 217 33.2
Ciclev10019083m.g Citrus clementina HOM05D001320 ORTHO05D002136 4.4e-09 65.9 198 35.4
vmacro13439 Vaccinium macrocarpon HOM05D001320 ORTHO05D002136 4.4e-09 65.9 172 37.8
Dinv06923 Davidia involucrata HOM05D001320 ORTHO05D014204 5.7e-09 65.5 138 41.3
Atru.chr9.1337 Acer truncatum HOM05D001320 ORTHO05D002136 7.5e-09 65.1 219 31.1
Hma1.2p1_1635F.1_g294760 Hydrangea macrophylla HOM05D001320 ORTHO05D002136 7.5e-09 65.1 222 31.1
Gohir.D08G190500 Gossypium hirsutum HOM05D001320 ORTHO05D002136 1.3e-08 64.3 222 35.6
Gorai.004G200600 Gossypium raimondii HOM05D001320 ORTHO05D002136 2.8e-08 63.2 222 35.6
PSO170G0403 Papaver somniferum HOM05D001320 ORTHO05D002136 2.8e-08 63.2 250 35.2
Potri.014G060500 Populus trichocarpa HOM05D001320 ORTHO05D002136 2.8e-08 63.2 218 33.9
PGR042G0628 Punica granatum HOM05D001320 ORTHO05D002136 3.7e-08 62.8 204 33.8
GSVIVG01027680001 Vitis vinifera HOM05D001320 ORTHO05D002136 3.7e-08 62.8 179 30.7
Lalb_Chr12g0207921 Lupinus albus HOM05D001320 ORTHO05D002136 6.3e-08 62.0 88 45.5
Dinv03618 Davidia involucrata HOM05D001320 ORTHO05D014204 8.3e-08 61.6 139 41.7
Potri.002G144700 Populus trichocarpa HOM05D001320 ORTHO05D002136 8.3e-08 61.6 219 34.2
Rhsim01G0150800 Rhododendron simsii HOM05D001320 ORTHO05D002136 1.4e-07 60.8 175 35.4
Sabra02G0112600 Salix brachista HOM05D001320 ORTHO05D002136 1.8e-07 60.5 226 33.6
SalBow5G2653 Salvia bowleyana HOM05D001320 ORTHO05D002136 1.8e-07 60.5 215 34.4
SalBow5G3328 Salvia bowleyana HOM05D001320 ORTHO05D002136 1.8e-07 60.5 215 34.4
vmacro21029 Vaccinium macrocarpon HOM05D001320 ORTHO05D002136 1.8e-07 60.5 173 34.7
Migut.B01597 Erythranthe guttata HOM05D001320 ORTHO05D002136 2.4e-07 60.1 216 36.6
Lsat_1_v5_gn_7_9261 Lactuca sativa HOM05D001320 ORTHO05D002136 3.1e-07 59.7 192 31.2
TAR374G0827 Trochodendron aralioides HOM05D001320 ORTHO05D014204 3.1e-07 59.7 68 58.8
CSS0017534 Camellia sinensis var. sinensis HOM05D001320 ORTHO05D002136 4.1e-07 59.3 168 33.9
ClCG06G003050 Citrullus lanatus HOM05D001320 ORTHO05D002136 5.4e-07 58.9 220 31.8
CANSAT21G1072 Cannabis sativa HOM05D001320 ORTHO05D002136 7.0e-07 58.5 205 34.1
PSO017G7339 Papaver somniferum HOM05D001320 ORTHO05D002136 1.2e-06 57.8 247 33.6
Potri.002G144200 Populus trichocarpa HOM05D001320 ORTHO05D002136 1.2e-06 57.8 215 33.0
Potri.014G060200 Populus trichocarpa HOM05D001320 ORTHO05D002136 1.2e-06 57.8 215 32.1
Psat3g163480 Pisum sativum HOM05D001320 ORTHO05D002136 2.0e-06 57.0 209 33.0
Actinidia14439 Actinidia chinensis HOM05D001320 ORTHO05D002136 5.9e-06 55.5 205 28.8
unitig_22.g5387 Utricularia gibba HOM05D001320 ORTHO05D002136 5.9e-06 55.5 213 32.9


User provided reference genes

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