Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0057 Trochodendron aralioides HOM05D009698 ORTHO05D000385 3.9e-56 221.1 101 100.0
TAR625G0678 Trochodendron aralioides HOM05D000369 ORTHO05D000385 2.7e-41 171.8 100 75.0
TAR626G0226 Trochodendron aralioides HOM05D009698 ORTHO05D000385 7.9e-41 170.2 100 74.0
TAR627G1071 Trochodendron aralioides HOM05D000282 ORTHO05D000385 6.5e-35 150.6 100 74.0
TAR362G0054 Trochodendron aralioides HOM05D009698 ORTHO05D000385 4.6e-33 144.4 87 78.2
TAR371G1029 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.7e-25 118.6 94 55.3
TAR375G0735 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.0e-24 115.2 94 56.4
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 1.2e-17 93.2 98 44.9
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.2e-17 93.2 98 44.9
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.2e-17 93.2 98 44.9
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 1.2e-17 93.2 98 44.9
TAR633G0853 Trochodendron aralioides HOM05D001163 ORTHO05D001769 1.2e-17 93.2 98 44.9
TAR049G0006 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.5e-15 86.3 48 79.2
TAR374G1432 Trochodendron aralioides HOM05D009698 ORTHO05D000385 2.0e-15 85.9 73 50.7
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.1e-13 80.1 98 43.9
TAR636G2188 Trochodendron aralioides HOM05D004616 ORTHO05D000385 1.8e-13 79.3 78 42.3
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 3.5e-12 75.1 94 39.4
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 4.5e-12 74.7 94 39.4
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 4.5e-12 74.7 94 39.4
TAR383G0938 Trochodendron aralioides HOM05D009698 ORTHO05D000385 1.0e-11 73.6 57 57.9
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.3e-11 73.2 97 38.1
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 2.2e-11 72.4 94 40.4
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.0e-11 71.2 89 40.4
MBI18_g39412_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.5e-10 69.7 100 37.0
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.9e-10 69.3 100 36.0
HanXRQChr03g0084621 Helianthus annuus HOM05D008488 ORTHO05D000385 9.4e-10 67.0 98 35.7
TAR375G0788 Trochodendron aralioides HOM05D052100 ORTHO05D051503 9.4e-10 67.0 95 40.0
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.6e-09 66.2 97 35.1
HanXRQChr03g0064951 Helianthus annuus HOM05D005763 ORTHO05D005970 2.7e-09 65.5 93 40.9
Nn4g24072 Nelumbo nucifera HOM05D001309 ORTHO05D000385 2.7e-09 65.5 102 35.3
TAR628G0437 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.7e-09 65.5 67 47.8
ECA234G0887 Erigeron canadensis HOM05D008488 ORTHO05D000385 3.6e-09 65.1 101 29.7
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 4.7e-09 64.7 97 34.0
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 6.1e-09 64.3 94 34.0
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 6.1e-09 64.3 94 36.2
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.1e-09 64.3 98 34.7
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 6.1e-09 64.3 98 35.7
TAR629G2343 Trochodendron aralioides HOM05D000132 ORTHO05D000058 8.0e-09 63.9 44 63.6
MBI16_g34941_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.4e-08 63.2 93 34.4
Os04g0609900 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 1.4e-08 63.2 99 37.4
TAR624G1439 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.3e-08 62.4 98 33.7
Os04g0610000 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 3.0e-08 62.0 99 33.3
HanXRQChr09g0254541 Helianthus annuus HOM05D008488 ORTHO05D000385 4.0e-08 61.6 87 34.5
ECA247G3253 Erigeron canadensis HOM05D005763 ORTHO05D005970 6.7e-08 60.8 94 36.2
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-07 60.1 101 35.6
FAN05G4468 Fragaria x ananassa HOM05D005731 ORTHO05D000222 1.5e-07 59.7 92 31.5
FAN28G1086 Fragaria x ananassa HOM05D005731 ORTHO05D000222 1.5e-07 59.7 92 31.5
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.5e-07 59.7 67 44.8
Nn2g11546 Nelumbo nucifera HOM05D001309 ORTHO05D000385 2.0e-07 59.3 85 35.3
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.3e-07 58.5 96 33.3
TAR369G0592 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.3e-07 58.5 98 31.6
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.4e-07 58.2 98 32.7
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.4e-07 58.2 98 32.7
FAN04G0640 Fragaria x ananassa HOM05D005731 ORTHO05D000222 4.4e-07 58.2 92 31.5
MBI19_g33997_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.4e-07 58.2 93 35.5
FAN01G1984 Fragaria x ananassa HOM05D005731 ORTHO05D000222 5.7e-07 57.8 92 30.4
FAN11G2336 Fragaria x ananassa HOM05D005731 ORTHO05D000222 5.7e-07 57.8 92 29.3
CSS0004008 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.5e-07 57.4 98 32.7
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 7.5e-07 57.4 97 30.9
CSS0040510 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.7e-07 57.0 96 32.3
ECA236G1232 Erigeron canadensis HOM05D008488 ORTHO05D000385 9.7e-07 57.0 94 31.9
TAR625G0459 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.7e-06 56.2 85 35.3
MBI06_g41780_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.8e-06 55.5 98 31.6
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.8e-06 55.5 107 36.4
PSO832G1398 Papaver somniferum HOM05D001309 ORTHO05D000385 2.8e-06 55.5 85 28.2
Rhsim04G0054800 Rhododendron simsii HOM05D001309 ORTHO05D000385 2.8e-06 55.5 85 34.1
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.8e-06 55.5 85 34.1
TWI36G1730 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 2.8e-06 55.5 82 36.6
DCAR_001756 Daucus carota HOM05D001309 ORTHO05D000385 3.7e-06 55.1 93 35.5
FAN09G2810 Fragaria x ananassa HOM05D005731 ORTHO05D000222 3.7e-06 55.1 92 30.4
Ca_17856_v3 Cicer arietinum L. HOM05D008291 ORTHO05D003568 4.8e-06 54.7 90 31.1
Lj4g0027394 Lotus japonicus HOM05D008291 ORTHO05D003568 4.8e-06 54.7 94 25.5
PSO349G0081 Papaver somniferum HOM05D001309 ORTHO05D000385 4.8e-06 54.7 87 32.2
Rhsim01G0178700 Rhododendron simsii HOM05D001309 ORTHO05D000385 4.8e-06 54.7 85 35.3
TWI18G1095 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 4.8e-06 54.7 82 35.4
MBI16_g34343_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.3e-06 54.3 99 37.4
MD09G1027200 Malus domestica HOM05D005763 ORTHO05D005970 6.3e-06 54.3 84 31.0
Nn7g37991 Nelumbo nucifera HOM05D001309 ORTHO05D000385 6.3e-06 54.3 77 40.3
RcHm_v2.0_Chr2g0151391 Rosa chinensis HOM05D008315 ORTHO05D009452 6.3e-06 54.3 84 32.1
FAN07G1546 Fragaria x ananassa HOM05D005731 ORTHO05D000222 8.2e-06 53.9 78 34.6
MBI19_g18856_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 8.2e-06 53.9 107 35.5
Nitab4.5_0000111g0060 Nicotiana tabacum HOM05D008455 ORTHO05D009597 8.2e-06 53.9 100 32.0
TWI73G1228 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 8.2e-06 53.9 81 34.6


User provided reference genes

Program Settings