Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0026 Trochodendron aralioides HOM05D004409 ORTHO05D005292 7.3e-59 230.3 114 100.0
TAR375G0498 Trochodendron aralioides HOM05D004409 ORTHO05D005292 4.3e-51 204.5 111 88.3
TAR375G0880 Trochodendron aralioides HOM05D004409 ORTHO05D005292 1.3e-47 193.0 105 89.5
TAR375G0484 Trochodendron aralioides HOM05D004409 ORTHO05D005292 1.7e-44 182.6 114 72.8
Dinv28881 Davidia involucrata HOM05D004409 ORTHO05D005292 2.0e-32 142.5 117 60.7
GSVIVG01004835001 Vitis vinifera HOM05D004409 ORTHO05D005292 7.1e-30 134.0 112 53.6
Duzib205G0528 Durio zibethinus HOM05D004409 ORTHO05D005292 1.6e-29 132.9 113 58.4
Dinv34530 Davidia involucrata HOM05D004409 ORTHO05D005292 2.1e-29 132.5 114 55.3
Atru.chr9.1197 Acer truncatum HOM05D004409 ORTHO05D005292 7.8e-29 130.6 118 55.9
FAN10G3781 Fragaria x ananassa HOM05D004409 ORTHO05D005292 1.7e-28 129.4 114 54.4
FvH4_7g26400 Fragaria vesca HOM05D004409 ORTHO05D005292 2.3e-28 129.0 114 54.4
Actinidia10866 Actinidia chinensis HOM05D004409 ORTHO05D005292 3.0e-28 128.6 113 54.0
Thecc.03G239100 Theobroma cacao HOM05D004409 ORTHO05D005292 3.0e-28 128.6 114 57.0
Potri.003G084000 Populus trichocarpa HOM05D004409 ORTHO05D005292 5.1e-28 127.9 113 53.1
Atru.chr6.1971 Acer truncatum HOM05D004409 ORTHO05D005292 6.6e-28 127.5 105 58.1
Actinidia31492 Actinidia chinensis HOM05D004409 ORTHO05D005292 6.6e-28 127.5 105 58.1
TWI60G0543 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 8.6e-28 127.1 105 56.2
Manes.01G089900 Manihot esculenta HOM05D004409 ORTHO05D005292 1.9e-27 125.9 119 55.5
RcHm_v2.0_Chr1g0372951 Rosa chinensis HOM05D004409 ORTHO05D005292 2.5e-27 125.6 101 59.4
TAR636G0884 Trochodendron aralioides HOM05D004409 ORTHO05D005292 2.5e-27 125.6 113 55.8
RcHm_v2.0_Chr1g0328171 Rosa chinensis HOM05D004409 ORTHO05D005292 5.6e-27 124.4 106 55.7
Duzib068G1042 Durio zibethinus HOM05D004409 ORTHO05D005292 7.3e-27 124.0 113 51.3
GSVIVG01004822001 Vitis vinifera HOM05D004409 ORTHO05D005292 7.3e-27 124.0 100 55.0
GSVIVG01004827001 Vitis vinifera HOM05D004409 ORTHO05D005292 7.3e-27 124.0 100 55.0
Gohir.D12G214900 Gossypium hirsutum HOM05D004409 ORTHO05D005292 1.2e-26 123.2 111 52.3
Hma1.2p1_1014F.1_g247850 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 1.2e-26 123.2 111 55.0
CSS0044628 Camellia sinensis var. sinensis HOM05D004409 ORTHO05D005292 1.6e-26 122.9 108 52.8
Sabra03G0054600 Salix brachista HOM05D004409 ORTHO05D005292 1.6e-26 122.9 113 52.2
Ciclev10022946m.g Citrus clementina HOM05D004409 ORTHO05D005292 2.8e-26 122.1 100 57.0
QL12p008592 Quercus lobata HOM05D004409 ORTHO05D005292 2.8e-26 122.1 115 54.8
Thecc.03G144800 Theobroma cacao HOM05D004409 ORTHO05D005292 2.8e-26 122.1 105 57.1
Gohir.A12G212400 Gossypium hirsutum HOM05D004409 ORTHO05D005292 3.6e-26 121.7 111 50.5
Nitab4.5_0000185g0190 Nicotiana tabacum HOM05D004409 ORTHO05D005292 3.6e-26 121.7 112 54.5
Gorai.008G230500 Gossypium raimondii HOM05D004409 ORTHO05D005292 4.7e-26 121.3 111 50.5
PGSC0003DMG400026212 Solanum tuberosum HOM05D004409 ORTHO05D005292 4.7e-26 121.3 107 51.4
GSVIVG01013815001 Vitis vinifera HOM05D004409 ORTHO05D005292 4.7e-26 121.3 115 47.8
Actinidia01026 Actinidia chinensis HOM05D004409 ORTHO05D005292 1.4e-25 119.8 105 52.4
CAN.G572.17 Capsicum annuum HOM05D004409 ORTHO05D005292 1.8e-25 119.4 95 56.8
CANSAT56G0658 Cannabis sativa HOM05D004409 ORTHO05D005292 2.4e-25 119.0 114 51.8
TWI39G0193 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 2.4e-25 119.0 105 58.1
CANSAT56G4079 Cannabis sativa HOM05D004409 ORTHO05D005292 3.1e-25 118.6 111 52.3
COL.COLO4_37301 Corchorus olitorius HOM05D004409 ORTHO05D005292 3.1e-25 118.6 105 56.2
Peaxi162Scf00102g00085 Petunia axillaris HOM05D004409 ORTHO05D005292 4.0e-25 118.2 108 53.7
Thecc.03G144700 Theobroma cacao HOM05D004409 ORTHO05D005292 5.2e-25 117.9 105 55.2
TWI39G0462 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 5.2e-25 117.9 105 58.1
GSVIVG01013825001 Vitis vinifera HOM05D004409 ORTHO05D005292 5.2e-25 117.9 110 48.2
Aqoxy3G02644 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 8.9e-25 117.1 113 50.4
PGR142G3629 Punica granatum HOM05D004409 ORTHO05D005292 8.9e-25 117.1 111 50.5
CANSAT56G2756 Cannabis sativa HOM05D004409 ORTHO05D005292 1.2e-24 116.7 111 50.5
TWI39G0310 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 1.2e-24 116.7 105 57.1
GSVIVG01024506001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.2e-24 116.7 103 51.5
Duzib068G0789 Durio zibethinus HOM05D004409 ORTHO05D005292 2.0e-24 115.9 107 52.3
ECA240G1407 Erigeron canadensis HOM05D004409 ORTHO05D005292 2.0e-24 115.9 87 59.8
Thecc.03G144900 Theobroma cacao HOM05D004409 ORTHO05D005292 2.0e-24 115.9 113 50.4
Cc06_g12260 Coffea canephora HOM05D004409 ORTHO05D005292 2.6e-24 115.5 119 46.2
DCAR_008327 Daucus carota HOM05D004409 ORTHO05D005292 2.6e-24 115.5 85 57.6
Hma1.2p1_3159F.1_g333389 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 2.6e-24 115.5 108 49.1
RcHm_v2.0_Chr1g0328141 Rosa chinensis HOM05D004409 ORTHO05D005292 2.6e-24 115.5 111 47.7
GSVIVG01013894001 Vitis vinifera HOM05D004409 ORTHO05D005292 2.6e-24 115.5 88 56.8
Dinv28880 Davidia involucrata HOM05D001887 ORTHO05D003756 3.4e-24 115.2 109 49.5
Duzib205G0410 Durio zibethinus HOM05D004409 ORTHO05D005292 3.4e-24 115.2 103 55.3
RcHm_v2.0_Chr1g0372991 Rosa chinensis HOM05D004409 ORTHO05D005292 3.4e-24 115.2 111 47.7
GSVIVG01004832001 Vitis vinifera HOM05D004409 ORTHO05D005292 4.4e-24 114.8 87 58.6
Ciclev10030379m.g Citrus clementina HOM05D004409 ORTHO05D005292 5.8e-24 114.4 85 60.0
Lsat_1_v5_gn_6_94501 Lactuca sativa HOM05D004409 ORTHO05D005292 5.8e-24 114.4 102 51.0
Cfa012334 Carpinus fangiana HOM05D004409 ORTHO05D005292 7.6e-24 114.0 106 53.8
FvH4_7g26430 Fragaria vesca HOM05D004409 ORTHO05D005292 9.9e-24 113.6 110 50.9
Hma1.2p1_1014F.1_g247840 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 9.9e-24 113.6 111 51.4
Cfa012333 Carpinus fangiana HOM05D004409 ORTHO05D005292 1.3e-23 113.2 110 50.9
HanXRQChr13g0419061 Helianthus annuus HOM05D004409 ORTHO05D005292 1.7e-23 112.8 106 50.9
Prupe.5G054600 Prunus persica HOM05D004409 ORTHO05D005292 2.9e-23 112.1 120 53.3
CANSAT56G2887 Cannabis sativa HOM05D004409 ORTHO05D005292 3.8e-23 111.7 105 51.4
GSVIVG01024502001 Vitis vinifera HOM05D004409 ORTHO05D005292 3.8e-23 111.7 115 47.0
COL.COLO4_06685 Corchorus olitorius HOM05D004409 ORTHO05D005292 4.9e-23 111.3 100 52.0
GSVIVG01013816001 Vitis vinifera HOM05D004409 ORTHO05D005292 4.9e-23 111.3 88 56.8
Aqoxy6G00065 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 6.4e-23 110.9 120 48.3
Cc08_g11210 Coffea canephora HOM05D004409 ORTHO05D005292 6.4e-23 110.9 107 51.4
Oeu019420.1 Olea europaea HOM05D004409 ORTHO05D005292 6.4e-23 110.9 106 48.1
Atru.chr9.1196 Acer truncatum HOM05D004409 ORTHO05D005292 1.1e-22 110.2 90 53.3
COL.COLO4_32251 Corchorus olitorius HOM05D004409 ORTHO05D005292 1.1e-22 110.2 115 51.3
Eucgr.K00114 Eucalyptus grandis HOM05D004409 ORTHO05D005292 1.1e-22 110.2 81 56.8
DCAR_005587 Daucus carota HOM05D004409 ORTHO05D005292 1.9e-22 109.4 103 48.5
FAN03G2468 Fragaria x ananassa HOM05D004409 ORTHO05D005292 1.9e-22 109.4 110 48.2
CAN.G845.22 Capsicum annuum HOM05D004409 ORTHO05D005292 3.2e-22 108.6 109 48.6
FAN01G0604 Fragaria x ananassa HOM05D004409 ORTHO05D005292 3.2e-22 108.6 110 48.2
FAN10G4140 Fragaria x ananassa HOM05D004409 ORTHO05D005292 3.2e-22 108.6 87 58.6
HanXRQChr03g0089681 Helianthus annuus HOM05D004409 ORTHO05D005292 3.2e-22 108.6 87 54.0
CANSAT21G0033 Cannabis sativa HOM05D004409 ORTHO05D005292 5.4e-22 107.8 114 47.4
THA.LOC104809923 Tarenaya hassleriana HOM05D004409 ORTHO05D005292 5.4e-22 107.8 87 55.2
Dinv25140 Davidia involucrata HOM05D004409 ORTHO05D005292 7.1e-22 107.5 118 47.5
COL.COLO4_37302 Corchorus olitorius HOM05D004409 ORTHO05D005292 9.3e-22 107.1 105 45.7
FAN06G5092 Fragaria x ananassa HOM05D004409 ORTHO05D005292 9.3e-22 107.1 105 50.5
HanXRQChr03g0089691 Helianthus annuus HOM05D004409 ORTHO05D005292 9.3e-22 107.1 112 46.4
CANSAT21G0737 Cannabis sativa HOM05D004409 ORTHO05D005292 1.6e-21 106.3 91 53.8
MELO3C014170.2 Cucumis melo HOM05D004409 ORTHO05D005292 1.6e-21 106.3 112 47.3
TWI39G0819 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 1.6e-21 106.3 98 57.1
Oeu006074.1 Olea europaea HOM05D004409 ORTHO05D005292 2.1e-21 105.9 100 50.0
GSVIVG01004836001 Vitis vinifera HOM05D004409 ORTHO05D005292 2.1e-21 105.9 103 51.5
Migut.H01906 Erythranthe guttata HOM05D004409 ORTHO05D005292 2.7e-21 105.5 113 45.1
DCAR_003519 Daucus carota HOM05D004409 ORTHO05D005292 3.5e-21 105.1 85 55.3
ECA240G0589 Erigeron canadensis HOM05D004409 ORTHO05D005292 3.5e-21 105.1 107 46.7
Lsat_1_v5_gn_6_94401 Lactuca sativa HOM05D004409 ORTHO05D005292 3.5e-21 105.1 112 46.4
Oeu056339.1 Olea europaea HOM05D004409 ORTHO05D005292 3.5e-21 105.1 111 45.0
EL10Ac1g00121 Beta vulgaris HOM05D004409 ORTHO05D005292 4.6e-21 104.8 116 44.0
Hma1.2p1_1014F.1_g247830 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 4.6e-21 104.8 100 50.0
Haze_08359 Corylus avellana HOM05D004409 ORTHO05D005292 6.0e-21 104.4 99 54.5
Ciclev10022894m.g Citrus clementina HOM05D004409 ORTHO05D005292 1.3e-20 103.2 107 44.9
FAN17G1151 Fragaria x ananassa HOM05D004409 ORTHO05D005292 1.3e-20 103.2 111 46.8
CsaV3_3G004710 Cucumis sativus L. HOM05D004409 ORTHO05D005292 1.7e-20 102.8 103 48.5
HanXRQChr13g0419051 Helianthus annuus HOM05D004409 ORTHO05D005292 1.7e-20 102.8 102 45.1
GSVIVG01004838001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.7e-20 102.8 103 50.5
Ciclev10033339m.g Citrus clementina HOM05D004409 ORTHO05D005292 2.3e-20 102.4 86 54.7
Cpa.g.sc13.213 Carica papaya HOM05D004409 ORTHO05D005292 3.9e-20 101.7 111 45.9
CsaV3_3G002240 Cucumis sativus L. HOM05D004409 ORTHO05D005292 6.6e-20 100.9 103 48.5
Migut.H01907 Erythranthe guttata HOM05D004409 ORTHO05D005292 6.6e-20 100.9 114 43.0
Sed0027041 Sechium edule HOM05D004409 ORTHO05D005292 6.6e-20 100.9 104 47.1
MELO3C013895.2 Cucumis melo HOM05D004409 ORTHO05D005292 8.7e-20 100.5 106 48.1
ClCG10G002150 Citrullus lanatus HOM05D004409 ORTHO05D005292 3.3e-19 98.6 84 53.6
COL.COLO4_21695 Corchorus olitorius HOM05D004409 ORTHO05D005292 3.3e-19 98.6 86 52.3
ATR1136G211 Amborella trichopoda HOM05D004409 ORTHO05D005292 4.3e-19 98.2 106 45.3
Eucgr.K00115 Eucalyptus grandis HOM05D004409 ORTHO05D005292 5.6e-19 97.8 105 49.5
Gohir.D13G124300 Gossypium hirsutum HOM05D004409 ORTHO05D005292 7.3e-19 97.4 110 45.5
Thecc.07G180600 Theobroma cacao HOM05D004409 ORTHO05D005292 7.3e-19 97.4 100 44.0
SGA_v2.0_scaffold91G28102 Striga asiatica HOM05D004409 ORTHO05D005292 9.6e-19 97.1 104 44.2
Prupe.7G057100 Prunus persica HOM05D004409 ORTHO05D005292 1.6e-18 96.3 114 47.4
HanXRQChr13g0418291 Helianthus annuus HOM05D004409 ORTHO05D005292 2.1e-18 95.9 87 48.3
MD07G1239500 Malus domestica HOM05D004409 ORTHO05D005292 6.2e-18 94.4 103 44.7
Actinidia25914 Actinidia chinensis HOM05D004409 ORTHO05D005292 1.1e-17 93.6 110 38.2
MSTRG.27238 Avicennia marina HOM05D004409 ORTHO05D005292 1.4e-17 93.2 87 48.3
MD07G1239800 Malus domestica HOM05D004409 ORTHO05D005292 1.8e-17 92.8 110 43.6
ECA240G4009 Erigeron canadensis HOM05D004409 ORTHO05D005292 3.1e-17 92.0 82 50.0
MD07G1239700 Malus domestica HOM05D004409 ORTHO05D005292 4.0e-17 91.7 105 44.8
Peaxi162Scf00391g00715 Petunia axillaris HOM05D004409 ORTHO05D005292 1.5e-16 89.7 108 43.5
Hund27103 Selenicereus undatus HOM05D004409 ORTHO05D005292 1.5e-16 89.7 111 37.8
Thecc.08G189000 Theobroma cacao HOM05D004409 ORTHO05D005292 1.5e-16 89.7 107 42.1
Migut.J00932 Erythranthe guttata HOM05D004409 ORTHO05D005292 4.5e-16 88.2 106 40.6
PGR042G3450 Punica granatum HOM05D004409 ORTHO05D005292 5.8e-16 87.8 85 44.7
ATR1136G026 Amborella trichopoda HOM05D004409 ORTHO05D005292 7.6e-16 87.4 106 40.6
THA.LOC104816486 Tarenaya hassleriana HOM05D004409 ORTHO05D005292 7.6e-16 87.4 110 40.0
ATR1136G215 Amborella trichopoda HOM05D004409 ORTHO05D005292 9.9e-16 87.0 84 42.9
Carub.0006s2782 Capsella rubella HOM05D004409 ORTHO05D005292 3.8e-15 85.1 109 43.1
Ciclev10033338m.g Citrus clementina HOM05D004409 ORTHO05D005292 3.8e-15 85.1 106 40.6
CARHR260260 Cardamine hirsuta HOM05D004409 ORTHO05D005292 1.1e-14 83.6 107 42.1
Aa31LG9G14800 Aethionema arabicum HOM05D004409 ORTHO05D005292 2.4e-14 82.4 107 39.3
BcaC01g03728 Brassica carinata HOM05D004409 ORTHO05D005292 1.6e-13 79.7 85 45.9
BcaB01g02799 Brassica carinata HOM05D004409 ORTHO05D005292 1.0e-12 77.0 104 39.4
BcaB04g18966 Brassica carinata HOM05D004409 ORTHO05D005292 1.8e-12 76.3 85 43.5
Sp6g08250 Schrenkiella parvula HOM05D004409 ORTHO05D005292 1.8e-12 76.3 110 34.5
TAR375G0011 Trochodendron aralioides HOM05D004409 ORTHO05D414893 3.0e-12 75.5 42 90.5
Gorai.013G138900 Gossypium raimondii HOM05D004409 ORTHO05D005292 6.7e-12 74.3 60 53.3
TAR636G0767 Trochodendron aralioides HOM05D004409 ORTHO05D005292 1.5e-11 73.2 65 55.4
C03p49230 Brassica napus HOM05D004409 ORTHO05D005292 2.5e-11 72.4 83 39.8
Cfa012335 Carpinus fangiana HOM05D004409 ORTHO05D005292 4.3e-11 71.6 107 34.6
A03p40420 Brassica napus HOM05D004409 ORTHO05D005292 5.6e-11 71.2 80 42.5
BolC3t17205H Brassica oleracea HOM05D004409 ORTHO05D005292 5.6e-11 71.2 80 42.5
BraA03t13197Z Brassica rapa HOM05D004409 ORTHO05D005292 5.6e-11 71.2 80 42.5
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 1.3e-10 70.1 107 32.7
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 1.3e-10 70.1 107 32.7
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 3.6e-10 68.6 106 32.1
CAN.G572.18 Capsicum annuum HOM05D004409 ORTHO05D005292 2.6e-08 62.4 103 29.1
ATR0745G048 Amborella trichopoda HOM05D004409 ORTHO05D005292 5.8e-08 61.2 114 29.8
THA.LOC104800444 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 2.2e-07 59.3 95 31.6
CARHR241650 Cardamine hirsuta HOM05D002739 ORTHO05D002877 1.1e-06 57.0 112 31.2
Nn2g15045 Nelumbo nucifera HOM05D002739 ORTHO05D002877 1.1e-06 57.0 114 28.1
AT4G33550 Arabidopsis thaliana HOM05D002739 ORTHO05D002877 2.4e-06 55.8 107 31.8
BcaC01g00985 Brassica carinata HOM05D002739 ORTHO05D002877 2.4e-06 55.8 113 29.2
Nn7g36459 Nelumbo nucifera HOM05D002739 ORTHO05D002877 2.4e-06 55.8 108 34.3
BcaB03g12793 Brassica carinata HOM05D002739 ORTHO05D002877 4.2e-06 55.1 113 29.2
Thhalv10026604m.g Eutrema salsugineum HOM05D002739 ORTHO05D002877 5.5e-06 54.7 113 29.2
TAR623G0756 Trochodendron aralioides HOM05D002739 ORTHO05D002877 5.5e-06 54.7 105 27.6
Sp7g31290 Schrenkiella parvula HOM05D002739 ORTHO05D002877 7.1e-06 54.3 114 27.2
Aqoxy2G00284 Aquilegia oxysepala HOM05D002739 ORTHO05D002877 9.3e-06 53.9 88 30.7
PSO339G0161 Papaver somniferum HOM05D002739 ORTHO05D002877 9.3e-06 53.9 109 31.2


User provided reference genes

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