Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 3.1e-210 734.9 385 100.0
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.0e-120 437.6 328 74.7
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.5e-119 433.7 351 68.9
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 7.3e-111 404.8 335 69.0
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 2.8e-110 402.9 334 68.0
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 1.3e-107 394.0 337 67.7
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 5.4e-106 388.7 343 62.7
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 1.3e-104 384.0 331 63.4
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 8.6e-104 381.3 327 67.0
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 8.9e-101 371.3 337 65.6
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 1.2e-100 370.9 337 63.8
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 4.4e-100 369.0 330 62.1
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 6.4e-99 365.2 338 61.5
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 5.0e-96 355.5 350 60.0
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 1.5e-95 354.0 332 59.9
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 1.5e-95 354.0 323 60.4
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 4.3e-95 352.4 339 58.7
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 2.1e-94 350.1 337 57.6
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 2.1e-94 350.1 338 60.1
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 4.7e-94 349.0 348 57.8
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 1.1e-93 347.8 343 59.5
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 1.4e-93 347.4 257 71.2
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 2.3e-93 346.7 347 60.5
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 3.1e-93 346.3 331 59.2
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 4.0e-93 345.9 323 59.4
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 6.8e-93 345.1 338 58.9
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 2.0e-92 343.6 335 62.1
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 7.5e-92 341.7 228 75.4
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 9.9e-92 341.3 318 63.2
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 1.3e-91 340.9 331 60.1
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.7e-91 340.5 245 71.4
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 1.7e-91 340.5 295 64.4
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 3.7e-91 339.3 331 59.8
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 3.7e-91 339.3 333 61.3
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 8.3e-91 338.2 318 61.6
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.4e-90 337.4 267 69.3
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 2.4e-90 336.7 340 60.0
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 2.4e-90 336.7 295 63.1
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 7.1e-90 335.1 275 66.9
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.6e-89 334.0 318 61.0
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 1.6e-89 334.0 274 66.1
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 7.8e-89 331.6 351 57.3
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 8.6e-88 328.2 331 58.9
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 1.5e-87 327.4 305 63.0
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 1.5e-87 327.4 339 55.8
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 2.5e-87 326.6 276 65.6
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 7.3e-87 325.1 276 65.2
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 9.5e-87 324.7 276 64.9
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 3.6e-86 322.8 330 58.5
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 6.2e-86 322.0 348 54.9
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 8.1e-86 321.6 294 60.2
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 1.4e-85 320.9 279 65.2
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 1.8e-85 320.5 276 64.1
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 3.1e-85 319.7 334 57.8
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 5.2e-85 318.9 335 58.5
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 5.2e-85 318.9 262 63.7
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 6.8e-85 318.5 334 54.5
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 1.2e-84 317.8 354 57.1
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 1.5e-84 317.4 215 74.9
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 1.5e-84 317.4 215 74.9
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 2.0e-84 317.0 278 62.9
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 3.4e-84 316.2 302 60.6
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 3.8e-83 312.8 298 60.7
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 1.1e-82 311.2 286 65.4
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 4.1e-82 309.3 215 72.6
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 7.1e-82 308.5 362 51.1
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 4.6e-81 305.8 225 72.0
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 1.3e-80 304.3 295 59.7
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 1.3e-80 304.3 271 60.5
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 1.3e-80 304.3 320 57.5
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.7e-80 303.9 327 51.4
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 1.7e-80 303.9 304 56.9
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 3.0e-80 303.1 334 55.7
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 3.0e-80 303.1 369 49.6
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 5.1e-80 302.4 232 64.2
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 2.5e-79 300.1 279 62.4
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 2.5e-79 300.1 217 70.0
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 3.3e-79 299.7 273 60.4
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.2e-78 297.7 230 67.8
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 4.7e-78 295.8 199 75.4
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 6.2e-78 295.4 210 71.9
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 1.1e-77 294.7 259 65.6
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 1.8e-77 293.9 332 52.4
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 2.4e-77 293.5 220 68.2
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 9.0e-77 291.6 332 52.7
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 2.0e-76 290.4 346 52.0
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 2.6e-76 290.0 273 59.0
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 7.6e-76 288.5 322 53.4
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 9.9e-76 288.1 351 53.6
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.2e-75 287.0 351 53.3
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 2.9e-75 286.6 278 56.1
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 2.9e-75 286.6 329 52.3
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 1.9e-74 283.9 278 56.8
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 1.9e-74 283.9 271 57.9
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 1.9e-74 283.9 333 50.2
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 3.2e-74 283.1 198 71.2
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 3.2e-74 283.1 278 57.6
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 4.2e-74 282.7 340 51.5
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 7.1e-74 282.0 287 58.9
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 1.6e-73 280.8 282 58.2
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 2.1e-73 280.4 335 52.5
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 2.1e-73 280.4 198 68.2
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 2.7e-73 280.0 334 53.3
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 2.7e-73 280.0 203 68.0
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 3.5e-73 279.6 351 52.1
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 4.6e-73 279.3 276 55.8
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 1.7e-72 277.3 341 47.8
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 3.9e-72 276.2 270 55.9
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 3.9e-72 276.2 289 52.6
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 5.1e-72 275.8 331 52.3
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 5.1e-72 275.8 329 52.9
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 5.1e-72 275.8 254 58.7
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 5.1e-72 275.8 281 59.8
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 5.1e-72 275.8 264 62.9
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 5.1e-72 275.8 200 71.0
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 6.6e-72 275.4 349 50.7
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 6.6e-72 275.4 282 57.4
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 6.6e-72 275.4 282 57.4
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 8.7e-72 275.0 201 66.2
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 1.5e-71 274.2 224 63.4
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 1.9e-71 273.9 220 65.9
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 2.5e-71 273.5 400 46.8
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 2.5e-71 273.5 199 67.3
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 3.3e-71 273.1 198 68.2
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 3.3e-71 273.1 198 67.7
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 5.6e-71 272.3 198 67.7
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 5.6e-71 272.3 271 57.2
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 1.3e-70 271.2 212 65.6
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 3.6e-70 269.6 287 55.7
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 1.1e-69 268.1 198 66.2
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 1.8e-69 267.3 212 63.7
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 4.0e-69 266.2 222 62.2
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 5.3e-69 265.8 276 57.6
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 7.6e-68 261.9 305 52.8
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 7.6e-68 261.9 227 61.2
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 1.7e-67 260.8 237 56.1
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 2.9e-67 260.0 212 63.7
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 8.4e-67 258.5 198 65.2
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 8.4e-67 258.5 198 65.7
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 3.2e-66 256.5 278 53.2
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 9.3e-66 255.0 281 56.2
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 3.0e-64 250.0 211 57.3
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 5.1e-64 249.2 198 62.1
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 2.2e-59 233.8 230 57.8
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 2.2e-59 233.8 280 46.4
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 3.8e-59 233.0 264 53.4
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 3.8e-59 233.0 265 50.6
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 1.8e-56 224.2 281 49.5
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 5.1e-56 222.6 309 50.5
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 3.7e-54 216.5 142 78.2
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 6.2e-54 215.7 259 54.1
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 1.6e-49 201.1 279 49.1
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 9.0e-45 185.3 181 58.6
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 9.7e-39 165.2 144 63.2
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 1.3e-38 164.9 201 48.3
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 6.9e-37 159.1 186 48.4
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.0e-32 145.2 209 43.1
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.1e-31 141.7 155 61.3
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 3.1e-29 133.7 104 66.3
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 4.7e-25 119.8 290 32.4
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 3.0e-24 117.1 82 75.6
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.6e-20 104.8 73 69.9
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 1.6e-17 94.7 138 48.6
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 2.6e-15 87.4 100 52.0
HPP92_028446 Vanilla planifolia HOM05D003626 ORTHO05D004255 3.8e-11 73.6 116 37.9
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 4.7e-09 66.6 52 61.5
HPP92_001477 Vanilla planifolia HOM05D003626 ORTHO05D004255 3.0e-08 63.9 116 40.5
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 8.8e-08 62.4 38 84.2
HPP92_027487 Vanilla planifolia HOM05D003626 ORTHO05D004255 5.7e-07 59.7 56 64.3
HPP92_028450 Vanilla planifolia HOM05D003626 ORTHO05D004255 6.3e-06 56.2 31 93.5


User provided reference genes

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