Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G1746 Trochodendron aralioides HOM05D007590 ORTHO05D007875 9.4e-56 219.9 109 100.0
TAR375G1006 Trochodendron aralioides HOM05D007590 ORTHO05D007875 2.7e-34 148.7 100 77.0
TAR629G1835 Trochodendron aralioides HOM05D007590 ORTHO05D007875 2.9e-33 145.2 100 76.0
TAR629G2201 Trochodendron aralioides HOM05D007590 ORTHO05D007875 8.8e-30 133.7 104 71.2
TAR636G1032 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.2e-29 133.3 100 71.0
Nn1g01873 Nelumbo nucifera HOM05D007590 ORTHO05D007875 3.4e-29 131.7 104 70.2
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 5.4e-27 124.4 103 65.0
Rhsim02G0243500 Rhododendron simsii HOM05D007590 ORTHO05D007875 2.0e-26 122.5 106 65.1
Hma1.2p1_1746F.1_g300410 Hydrangea macrophylla HOM05D007590 ORTHO05D007875 5.9e-26 120.9 109 62.4
Nn3g19015 Nelumbo nucifera HOM05D007590 ORTHO05D007875 9.5e-24 113.6 104 63.5
Aqoxy5G04230 Aquilegia oxysepala HOM05D007590 ORTHO05D007875 2.8e-23 112.1 106 58.5
CSS0045762 Camellia sinensis var. sinensis HOM05D007590 ORTHO05D007875 6.1e-23 110.9 107 58.9
Prupe.5G120200 Prunus persica HOM05D007590 ORTHO05D007875 8.0e-23 110.5 109 59.6
CiPaw.11G121300 Carya illinoinensis HOM05D007590 ORTHO05D007875 1.0e-22 110.2 102 61.8
Cfa012011 Carpinus fangiana HOM05D007590 ORTHO05D007875 1.5e-21 106.3 120 55.8
FAN13G0413 Fragaria x ananassa HOM05D007590 ORTHO05D007875 4.9e-20 101.3 111 61.3
LjContig00312_ERROPOS870357g0000452 Lotus japonicus HOM05D007590 ORTHO05D007875 8.3e-20 100.5 113 55.8
RcHm_v2.0_Chr7g0194781 Rosa chinensis HOM05D007590 ORTHO05D007875 1.1e-19 100.1 112 58.0
QL02p030422 Quercus lobata HOM05D007590 ORTHO05D007875 1.4e-19 99.8 111 52.3
CiPaw.12G082900 Carya illinoinensis HOM05D007590 ORTHO05D007875 1.8e-19 99.4 108 57.4
FAN08G0943 Fragaria x ananassa HOM05D007590 ORTHO05D007875 2.4e-19 99.0 116 56.0
Potri.003G140100 Populus trichocarpa HOM05D007590 ORTHO05D007875 2.4e-19 99.0 105 59.0
CDE10G0927 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 5.4e-19 97.8 100 52.0
FAN04G0970 Fragaria x ananassa HOM05D007590 ORTHO05D007875 5.4e-19 97.8 111 57.7
CDE10G0175 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 9.2e-19 97.1 101 51.5
Cc08_g16080 Coffea canephora HOM05D007590 ORTHO05D007875 2.7e-18 95.5 112 54.5
Glyma.01G225600 Glycine max HOM05D007590 ORTHO05D007875 2.7e-18 95.5 105 57.1
Sabra03G0101100 Salix brachista HOM05D007590 ORTHO05D007875 4.5e-18 94.7 105 54.3
Potri.001G091500 Populus trichocarpa HOM05D007590 ORTHO05D007875 5.9e-18 94.4 106 55.7
PGSC0003DMG400012280 Solanum tuberosum HOM05D007590 ORTHO05D007875 1.3e-17 93.2 100 56.0
Medtr5g009260 Medicago truncatula HOM05D007590 ORTHO05D007875 2.3e-17 92.4 100 54.0
Lsat_1_v5_gn_6_83961 Lactuca sativa HOM05D007590 ORTHO05D007875 6.6e-17 90.9 106 53.8
Manes.02G010000 Manihot esculenta HOM05D007590 ORTHO05D007875 8.6e-17 90.5 109 54.1
Phvul.002G164500 Phaseolus vulgaris HOM05D007590 ORTHO05D007875 8.6e-17 90.5 101 53.5
Solyc08g082370.1 Solanum lycopersicum HOM05D007590 ORTHO05D007875 1.1e-16 90.1 100 57.0
Sopen08g030630 Solanum pennellii HOM05D007590 ORTHO05D007875 1.1e-16 90.1 100 57.0
TPR.G25602 Trifolium pratense HOM05D007590 ORTHO05D007875 1.1e-16 90.1 101 55.4
Sabra01G0067900 Salix brachista HOM05D007590 ORTHO05D007875 1.5e-16 89.7 109 52.3
Thecc.03G298200 Theobroma cacao HOM05D007590 ORTHO05D007875 1.9e-16 89.4 109 53.2
CANSAT21G0370 Cannabis sativa HOM05D007590 ORTHO05D007875 4.3e-16 88.2 122 46.7
AUR62010841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 4.3e-16 88.2 108 50.9
HanXRQChr03g0083501 Helianthus annuus HOM05D007590 ORTHO05D007875 5.6e-16 87.8 103 55.3
Peaxi162Scf00074g00097 Petunia axillaris HOM05D007590 ORTHO05D007875 5.6e-16 87.8 86 60.5
AUR62019841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 9.5e-16 87.0 108 50.9
Ca_24513_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 9.5e-16 87.0 100 49.0
Ca_29733_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 9.5e-16 87.0 100 49.0
Peaxi162Scf00102g00178 Petunia axillaris HOM05D007590 ORTHO05D007875 2.1e-15 85.9 104 51.0
Actinidia22161 Actinidia chinensis HOM05D007590 ORTHO05D007875 2.8e-15 85.5 100 54.0
MSTRG.11924 Avicennia marina HOM05D007590 ORTHO05D007875 2.8e-15 85.5 101 50.5
MSTRG.25673 Avicennia marina HOM05D007590 ORTHO05D007875 8.0e-15 84.0 106 49.1
Duzib205G1174 Durio zibethinus HOM05D007590 ORTHO05D007875 1.0e-14 83.6 105 50.5
Manes.02G009900 Manihot esculenta HOM05D007590 ORTHO05D007875 1.8e-14 82.8 113 50.4
Sed0026863 Sechium edule HOM05D007590 ORTHO05D007875 2.3e-14 82.4 112 47.3
Manes.01G049200 Manihot esculenta HOM05D007590 ORTHO05D007875 3.0e-14 82.0 95 50.5
Oeu063521.1 Olea europaea HOM05D007590 ORTHO05D007875 3.0e-14 82.0 101 50.5
Nitab4.5_0002782g0040 Nicotiana tabacum HOM05D007590 ORTHO05D007875 5.2e-14 81.3 96 53.1
Duzib068G0682 Durio zibethinus HOM05D007590 ORTHO05D007875 6.8e-14 80.9 108 49.1
Lalb_Chr05g0211541 Lupinus albus HOM05D007590 ORTHO05D007875 1.5e-13 79.7 107 50.5
Ciclev10022592m.g Citrus clementina HOM05D007590 ORTHO05D007875 2.0e-13 79.3 103 48.5
EL10Ac5g12916 Beta vulgaris HOM05D007590 ORTHO05D007875 2.6e-13 79.0 82 56.1
DCAR_006487 Daucus carota HOM05D007590 ORTHO05D007875 3.4e-13 78.6 110 47.3
Gohir.D12G237700 Gossypium hirsutum HOM05D007590 ORTHO05D007875 3.4e-13 78.6 97 51.5
Gohir.D12G237966 Gossypium hirsutum HOM05D007590 ORTHO05D007875 3.4e-13 78.6 97 51.5
Gorai.008G254500 Gossypium raimondii HOM05D007590 ORTHO05D007875 3.4e-13 78.6 97 51.5
Sopen08g004200 Solanum pennellii HOM05D007590 ORTHO05D007875 3.4e-13 78.6 109 48.6
Glyma.11G017400 Glycine max HOM05D007590 ORTHO05D007875 7.5e-13 77.4 108 50.0
CiPaw.12G082700 Carya illinoinensis HOM05D007590 ORTHO05D007875 1.3e-12 76.6 105 51.4
Nitab4.5_0001231g0140 Nicotiana tabacum HOM05D007590 ORTHO05D007875 1.3e-12 76.6 96 50.0
PGSC0003DMG400005790 Solanum tuberosum HOM05D007590 ORTHO05D007875 3.7e-12 75.1 109 46.8
Duzib068G0902 Durio zibethinus HOM05D007590 ORTHO05D007875 4.9e-12 74.7 100 51.0
ClCG07G011620 Citrullus lanatus HOM05D007590 ORTHO05D007875 6.4e-12 74.3 65 58.5
Cpa.g.sc79.34 Carica papaya HOM05D007590 ORTHO05D007875 8.3e-12 73.9 118 44.9
MBI06_g08455_MAGBIO Magnolia biondii HOM05D007590 ORTHO05D007875 8.3e-12 73.9 102 41.2
Gohir.A12G236500 Gossypium hirsutum HOM05D007590 ORTHO05D007875 1.1e-11 73.6 103 49.5
TWI60G0225 Tripterygium wilfordii HOM05D007590 ORTHO05D007875 1.1e-11 73.6 113 47.8
COL.COLO4_10703 Corchorus olitorius HOM05D007590 ORTHO05D007875 1.9e-11 72.8 75 60.0
MELO3C016294.2 Cucumis melo HOM05D007590 ORTHO05D007875 1.9e-11 72.8 111 42.3
PGR031G2453 Punica granatum HOM05D007590 ORTHO05D007875 5.4e-11 71.2 126 43.7
Ah.12g052560 Amaranthus hybridus HOM05D007590 ORTHO05D007875 9.2e-11 70.5 118 42.4
Duzib084G0874 Durio zibethinus HOM05D007590 ORTHO05D007875 9.2e-11 70.5 96 51.0
Eucgr.D01739 Eucalyptus grandis HOM05D007590 ORTHO05D007875 9.2e-11 70.5 137 40.1
CsaV3_4G006590 Cucumis sativus L. HOM05D007590 ORTHO05D007875 1.6e-10 69.7 106 40.6
Thhalv10023875m.g Eutrema salsugineum HOM05D010600 ORTHO05D007875 1.6e-10 69.7 118 39.0
Sed0003477 Sechium edule HOM05D007590 ORTHO05D007875 3.5e-10 68.6 59 59.3
ATR0602G105 Amborella trichopoda HOM05D007590 ORTHO05D007875 6.0e-10 67.8 129 38.0
C09p17280 Brassica napus HOM05D010600 ORTHO05D007875 6.0e-10 67.8 113 39.8
BcaB07g31500 Brassica carinata HOM05D010600 ORTHO05D007875 7.8e-10 67.4 112 41.1
Lsat_1_v5_gn_3_10720 Lactuca sativa HOM05D007590 ORTHO05D007875 7.8e-10 67.4 111 44.1
BcaC04g22619 Brassica carinata HOM05D010600 ORTHO05D007875 1.0e-09 67.0 112 40.2
BolC9t54630H Brassica oleracea HOM05D010600 ORTHO05D007875 1.7e-09 66.2 112 38.4
Sp2g00320 Schrenkiella parvula HOM05D010600 ORTHO05D007875 3.9e-09 65.1 114 37.7
THA.LOC104817601 Tarenaya hassleriana HOM05D010600 ORTHO05D007875 5.0e-09 64.7 109 41.3
SalBow1G4032 Salvia bowleyana HOM05D007590 ORTHO05D007875 1.1e-08 63.5 96 43.8
SalBow1G6340 Salvia bowleyana HOM05D007590 ORTHO05D007875 1.1e-08 63.5 96 43.8
Aa31LG2G1420 Aethionema arabicum HOM05D010600 ORTHO05D007875 1.5e-08 63.2 119 38.7
C09p17810 Brassica napus HOM05D010600 ORTHO05D007875 1.5e-08 63.2 118 37.3
BolC9t54679H Brassica oleracea HOM05D010600 ORTHO05D007875 1.5e-08 63.2 118 37.3
BcaB07g31463 Brassica carinata HOM05D010600 ORTHO05D007875 1.9e-08 62.8 116 37.9
BcaC04g22568 Brassica carinata HOM05D010600 ORTHO05D007875 1.9e-08 62.8 116 37.9
Migut.A00642 Erythranthe guttata HOM05D007590 ORTHO05D007875 1.9e-08 62.8 107 42.1
A09p14360 Brassica napus HOM05D010600 ORTHO05D007875 2.5e-08 62.4 114 40.4
BraA09t37083Z Brassica rapa HOM05D010600 ORTHO05D007875 2.5e-08 62.4 114 40.4
SGA_v2.0_scaffold305G47972 Striga asiatica HOM05D007590 ORTHO05D007875 2.5e-08 62.4 106 43.4
AT1G64405 Arabidopsis thaliana HOM05D010600 ORTHO05D007875 9.5e-08 60.5 121 36.4
Carub.0002s0036 Capsella rubella HOM05D010600 ORTHO05D007875 9.5e-08 60.5 121 35.5
Gohir.D03G083700 Gossypium hirsutum HOM05D007590 ORTHO05D007875 1.6e-07 59.7 97 46.4
CARHR046510 Cardamine hirsuta HOM05D010600 ORTHO05D007875 3.6e-07 58.5 118 36.4
Gohir.A02G100200 Gossypium hirsutum HOM05D007590 ORTHO05D007875 3.6e-07 58.5 96 41.7
Haze_09063 Corylus avellana HOM05D007590 ORTHO05D007875 4.7e-07 58.2 73 49.3
Gorai.003G079000 Gossypium raimondii HOM05D007590 ORTHO05D007875 4.7e-07 58.2 97 45.4
AL2G10440 Arabidopsis lyrata HOM05D010600 ORTHO05D007875 6.2e-07 57.8 117 36.8
Gohir.A02G100100 Gossypium hirsutum HOM05D007590 ORTHO05D007875 1.4e-06 56.6 97 45.4
HPP92_008631 Vanilla planifolia HOM05D026338 ORTHO05D007875 1.4e-06 56.6 102 36.3
FvH4_5g04610 Fragaria vesca HOM05D007590 ORTHO05D007875 5.2e-06 54.7 51 64.7
FAN18G1504 Fragaria x ananassa HOM05D005474 ORTHO05D006551 5.2e-06 54.7 51 64.7
FAN18G3330 Fragaria x ananassa HOM05D005474 ORTHO05D006551 5.2e-06 54.7 51 64.7
THA.LOC104815061 Tarenaya hassleriana HOM05D008938 ORTHO05D011105 5.2e-06 54.7 110 40.0


User provided reference genes

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