Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 9.6e-270 932.9 483 100.0
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 4.3e-161 572.0 491 65.8
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 1.6e-136 490.3 494 56.7
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 3.8e-133 479.2 492 56.3
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 4.8e-120 435.6 494 52.6
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 5.5e-116 422.2 503 51.7
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 2.3e-114 416.8 443 56.0
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 1.6e-110 404.1 493 49.7
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 4.5e-110 402.5 424 56.4
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 1.5e-108 397.5 485 47.8
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 2.5e-108 396.7 498 51.2
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 8.8e-106 388.3 494 47.6
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 1.2e-102 377.9 489 47.4
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 2.7e-102 376.7 496 49.2
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 2.7e-102 376.7 568 44.9
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 3.8e-101 372.9 487 48.7
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 5.0e-101 372.5 479 47.8
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 1.9e-100 370.5 502 45.4
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 3.2e-100 369.8 493 47.5
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 2.6e-97 360.1 480 47.7
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 3.4e-97 359.8 480 47.9
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 1.3e-96 357.8 482 47.7
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 8.3e-96 355.1 493 45.6
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 1.4e-95 354.4 488 43.6
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 1.2e-94 351.3 497 45.9
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 1.0e-93 348.2 486 44.4
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 2.9e-93 346.7 489 44.4
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 1.5e-92 344.4 502 44.0
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 7.2e-92 342.0 494 43.9
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 1.6e-91 340.9 494 44.1
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 3.6e-91 339.7 490 43.5
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 4.0e-90 336.3 476 47.1
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 4.0e-90 336.3 528 44.1
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 2.8e-88 330.1 492 44.5
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 6.3e-88 328.9 416 50.5
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 1.1e-87 328.2 514 42.4
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 2.4e-87 327.0 488 44.9
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 3.1e-87 326.6 411 51.3
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 3.1e-87 326.6 499 43.3
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 5.4e-87 325.9 495 44.0
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 1.2e-86 324.7 455 44.6
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 7.8e-86 322.0 506 42.3
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 1.7e-85 320.9 490 43.1
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 2.9e-85 320.1 454 45.8
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 9.5e-84 315.1 455 45.1
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 8.0e-83 312.0 502 42.2
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 1.8e-82 310.8 479 45.9
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 2.3e-82 310.5 486 44.2
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 1.5e-81 307.8 481 42.8
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 2.6e-81 307.0 486 44.0
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 1.3e-80 304.7 504 41.7
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 1.7e-80 304.3 509 40.3
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 2.9e-80 303.5 458 44.3
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 6.4e-80 302.4 474 41.8
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 1.1e-79 301.6 466 42.1
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 1.4e-79 301.2 487 42.5
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 1.9e-79 300.8 439 45.1
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 1.3e-77 294.7 468 42.9
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 9.5e-76 288.5 411 43.3
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 1.6e-75 287.7 501 41.1
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 3.6e-75 286.6 586 35.8
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 4.0e-74 283.1 493 38.9
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 6.8e-74 282.3 508 39.4
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 3.4e-73 280.0 442 44.1
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 1.3e-72 278.1 461 42.3
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 9.2e-71 271.9 436 43.6
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 1.2e-70 271.6 358 46.4
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 3.5e-70 270.0 500 39.0
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 3.0e-69 266.9 514 38.9
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 1.2e-65 255.0 502 38.0
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 1.1e-63 248.4 364 45.6
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 1.4e-63 248.1 368 41.3
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 2.4e-63 247.3 449 40.3
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 1.9e-60 237.7 419 39.4
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 4.0e-58 229.9 559 33.3
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 4.4e-57 226.5 312 45.2
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 4.9e-56 223.0 335 43.3
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 2.4e-55 220.7 329 42.6
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 5.1e-53 213.0 188 62.8
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 5.6e-52 209.5 473 35.7
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 7.3e-52 209.1 481 31.8
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 4.8e-51 206.5 239 49.0
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 4.4e-49 199.9 287 43.9
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 1.7e-48 198.0 313 43.8
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 5.1e-45 186.4 170 60.0
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 7.3e-44 182.6 141 66.0
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 4.0e-42 176.8 497 34.6
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 3.8e-40 170.2 311 39.2
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 7.4e-36 156.0 498 30.7
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 4.0e-34 150.2 173 48.0
AL3G11840 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 1.5e-33 148.3 222 45.5
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 4.3e-28 130.2 158 46.2
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 2.5e-23 114.4 542 27.5
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 6.1e-22 109.8 218 36.7
Lsat_1_v5_gn_3_87441 Lactuca sativa HOM05D007356 ORTHO05D009247 1.3e-21 108.6 119 51.3
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 3.1e-18 97.4 202 31.7
AUR62035477 Chenopodium quinoa HOM05D000128 ORTHO05D000059 3.6e-14 84.0 93 44.1
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 1.0e-13 82.4 67 62.7
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 2.3e-13 81.3 198 30.3
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 2.3e-13 81.3 165 36.4
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 5.1e-13 80.1 91 47.3
Mapoly0080s0048 Marchantia polymorpha HOM05D007356 ORTHO05D009247 6.7e-13 79.7 350 26.9
Pp3c15_5150 Physcomitrium patens HOM05D007356 ORTHO05D009247 2.9e-08 64.3 104 37.5
HPP92_009695 Vanilla planifolia HOM05D007356 ORTHO05D009247 1.9e-07 61.6 92 45.7
CBR_g44341 Chara braunii HOM05D007356 ORTHO05D009247 2.1e-06 58.2 82 39.0


User provided reference genes

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