Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 4.1e-81 304.7 153 100.0
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 7.0e-33 144.4 79 87.3
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 1.1e-20 104.0 81 66.7
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 1.8e-20 103.2 79 63.3
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 6.8e-20 101.3 79 62.0
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 8.9e-20 100.9 80 61.2
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 1.5e-19 100.1 80 61.2
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 1.5e-19 100.1 81 59.3
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 2.6e-19 99.4 80 66.2
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 4.4e-19 98.6 80 60.0
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 7.5e-19 97.8 80 58.8
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 9.8e-19 97.4 80 58.8
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.3e-18 97.1 79 59.5
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 2.2e-18 96.3 81 60.5
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 4.9e-18 95.1 79 59.5
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 4.9e-18 95.1 79 59.5
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 6.4e-18 94.7 80 60.0
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 8.3e-18 94.4 80 55.0
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 1.1e-17 94.0 81 58.0
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 4.1e-17 92.0 80 53.8
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 9.2e-17 90.9 80 55.0
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 1.2e-16 90.5 83 56.6
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 1.6e-16 90.1 79 58.2
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 2.7e-16 89.4 80 57.5
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 3.5e-16 89.0 84 52.4
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 4.6e-16 88.6 81 56.8
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 1.0e-15 87.4 80 55.0
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 1.0e-15 87.4 80 58.8
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 1.0e-15 87.4 79 55.7
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 1.3e-15 87.0 80 53.8
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 2.3e-15 86.3 115 41.7
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 3.9e-15 85.5 126 45.2
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 6.6e-15 84.7 80 58.8
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 8.6e-15 84.3 119 40.3
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 1.5e-14 83.6 119 40.3
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.3e-14 82.4 119 39.5
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 7.3e-14 81.3 112 41.1
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 7.3e-14 81.3 83 57.8
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.6e-13 80.1 119 38.7
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 1.6e-13 80.1 80 55.0
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.1e-13 79.7 119 39.5
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 2.8e-13 79.3 81 50.6
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.8e-13 79.3 81 48.1
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 3.6e-13 79.0 81 53.1
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 3.6e-13 79.0 80 56.2
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 4.7e-13 78.6 98 50.0
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 1.4e-12 77.0 81 48.1
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 1.4e-12 77.0 80 53.8
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 5.2e-12 75.1 80 52.5
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 5.2e-12 75.1 80 53.8
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 2.6e-11 72.8 82 50.0
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 3.4e-11 72.4 83 48.2
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 7.6e-11 71.2 83 49.4
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 9.9e-11 70.9 80 45.0
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 9.9e-11 70.9 80 45.0
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 1.3e-10 70.5 66 53.0
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 1.7e-10 70.1 83 50.6
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 2.2e-10 69.7 79 49.4
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 2.9e-10 69.3 79 51.9
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 3.8e-10 68.9 80 50.0
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 1.1e-09 67.4 81 40.7
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 1.1e-09 67.4 80 47.5
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 1.9e-09 66.6 80 41.2
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 5.4e-09 65.1 116 37.1
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 7.1e-09 64.7 80 46.2
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.2e-08 63.9 63 49.2
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 1.6e-08 63.5 80 42.5


User provided reference genes

Program Settings