Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 2.2e-152 542.3 296 100.0
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 8.6e-96 354.4 286 71.7
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 4.5e-76 288.9 285 54.7
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 2.2e-75 286.6 285 56.5
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 7.4e-63 245.0 239 53.1
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 1.6e-62 243.8 253 50.6
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 2.6e-60 236.5 261 48.7
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 1.7e-59 233.8 313 45.0
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 2.9e-59 233.0 260 52.7
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 3.8e-59 232.6 244 52.0
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 1.1e-58 231.1 255 47.1
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 1.4e-58 230.7 280 50.4
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 1.4e-58 230.7 258 50.8
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 2.5e-58 229.9 254 49.6
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 3.2e-58 229.6 241 51.5
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 4.2e-58 229.2 319 43.3
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 7.2e-58 228.4 245 51.4
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 1.6e-57 227.3 250 53.2
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 1.6e-57 227.3 247 49.4
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 2.7e-57 226.5 273 48.0
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 3.6e-57 226.1 239 51.5
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 3.6e-57 226.1 237 49.8
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 4.6e-57 225.7 243 51.0
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 1.3e-56 224.2 238 49.2
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 1.3e-56 224.2 238 49.2
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 1.3e-56 224.2 265 48.7
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.1e-55 221.1 271 46.5
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 1.1e-55 221.1 271 46.5
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 4.3e-55 219.2 251 48.2
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 4.3e-55 219.2 241 49.4
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 7.4e-55 218.4 243 49.8
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 7.4e-55 218.4 271 46.1
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 1.1e-53 214.5 254 43.7
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 1.8e-53 213.8 253 45.1
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 1.8e-53 213.8 271 46.9
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 1.8e-53 213.8 233 50.6
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 2.4e-53 213.4 188 58.0
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 3.1e-53 213.0 285 45.3
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 4.1e-53 212.6 263 44.1
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 6.9e-53 211.8 268 46.3
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 6.9e-53 211.8 237 47.7
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 1.5e-52 210.7 269 48.7
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 2.0e-52 210.3 245 45.7
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 1.0e-51 208.0 167 60.5
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 1.3e-51 207.6 249 49.0
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 3.2e-50 203.0 241 48.1
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 4.2e-50 202.6 250 47.6
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 7.2e-50 201.8 269 44.2
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 9.4e-50 201.4 195 56.9
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 9.4e-50 201.4 244 46.3
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 7.9e-49 198.4 180 57.8
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 1.0e-48 198.0 194 54.6
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 1.0e-48 198.0 244 44.7
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 1.8e-48 197.2 180 54.4
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 3.3e-47 193.0 223 48.9
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 3.3e-47 193.0 254 43.3
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 4.8e-46 189.1 175 52.6
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 4.8e-46 189.1 175 52.6
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 1.4e-45 187.6 243 44.4
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 2.6e-44 183.3 291 38.5
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 2.6e-44 183.3 294 38.8
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 7.7e-44 181.8 266 42.9
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 3.8e-43 179.5 269 39.4
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 1.1e-42 177.9 230 42.6
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 1.1e-42 177.9 250 42.0
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 1.4e-42 177.6 258 42.2
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 2.5e-42 176.8 151 59.6
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 2.5e-42 176.8 150 59.3
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 1.2e-41 174.5 246 41.9
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 1.2e-41 174.5 246 41.9
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 1.2e-41 174.5 246 41.9
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 1.6e-41 174.1 248 41.9
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 2.7e-41 173.3 247 40.9
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 7.9e-41 171.8 279 40.1
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 1.0e-40 171.4 269 40.1
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 1.0e-40 171.4 151 54.3
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 1.8e-40 170.6 228 40.8
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 1.8e-40 170.6 174 53.4
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 6.7e-40 168.7 243 40.3
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 6.7e-40 168.7 243 40.3
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 1.1e-39 167.9 266 39.1
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 1.5e-39 167.5 266 39.1
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 2.0e-39 167.2 272 37.9
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 2.0e-39 167.2 148 54.7
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 2.6e-39 166.8 266 39.1
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 3.3e-39 166.4 288 36.5
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 7.4e-39 165.2 263 38.8
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 2.8e-38 163.3 251 40.2
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.4e-37 161.0 234 42.3
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 1.4e-37 161.0 234 41.9
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 3.5e-36 156.4 242 38.8
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 2.9e-35 153.3 159 54.1
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 1.9e-34 150.6 259 39.8
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 2.5e-34 150.2 173 47.4
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 3.2e-34 149.8 163 51.5
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 7.2e-34 148.7 166 50.6
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 1.2e-33 147.9 166 50.6
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 2.1e-33 147.1 170 47.1
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 2.7e-33 146.7 166 50.0
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 6.1e-33 145.6 161 49.7
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 1.4e-32 144.4 169 46.7
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 2.3e-32 143.7 169 46.2
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 6.7e-32 142.1 169 46.2
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 2.6e-31 140.2 161 47.2
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 1.7e-30 137.5 159 48.4
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 3.7e-30 136.3 169 44.4
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 6.3e-30 135.6 127 54.3
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 1.1e-29 134.8 159 47.8
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 2.4e-29 133.7 174 45.4
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 3.5e-28 129.8 275 38.2
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 3.8e-27 126.3 154 46.1
COL.COLO4_28120 Corchorus olitorius HOM05D007169 ORTHO05D007243 5.0e-27 125.9 259 34.7
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 8.0e-25 118.6 93 64.5
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 3.0e-24 116.7 91 53.8
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 3.7e-22 109.8 247 31.6
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 3.8e-19 99.8 131 45.0
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 4.2e-18 96.3 65 64.6
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 1.5e-10 71.2 79 40.5
CBR_g46730 Chara braunii HOM05D011398 ORTHO05D007243 6.1e-09 65.9 87 42.5
CBR_g30247 Chara braunii HOM05D011398 ORTHO05D007243 5.7e-07 59.3 104 32.7


User provided reference genes

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