Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G1499 Trochodendron aralioides HOM05D007599 ORTHO05D009548 9.4e-14 79.7 68 100.0
Actinidia22230 Actinidia chinensis HOM05D007599 ORTHO05D009548 1.4e-12 75.9 68 79.4
GSVIVG01019698001 Vitis vinifera HOM05D007599 ORTHO05D009548 3.0e-12 74.7 68 63.2
Rhsim07G0075900 Rhododendron simsii HOM05D007599 ORTHO05D009548 5.2e-12 73.9 68 94.1
Manes.02G000300 Manihot esculenta HOM05D007599 ORTHO05D009548 2.0e-11 72.0 68 92.6
Manes.01G000403 Manihot esculenta HOM05D007599 ORTHO05D009548 2.6e-11 71.6 68 91.2
Lsat_1_v5_gn_3_11180 Lactuca sativa HOM05D007599 ORTHO05D009548 4.4e-11 70.9 68 57.4
Sc07g0010220 Simmondsia chinensis HOM05D007599 ORTHO05D009548 9.8e-11 69.7 68 57.4
AUR62007084 Chenopodium quinoa HOM05D007599 ORTHO05D009548 2.8e-10 68.2 68 61.8
AUR62019947 Chenopodium quinoa HOM05D007599 ORTHO05D009548 2.8e-10 68.2 68 61.8
EL10Ac5g12394 Beta vulgaris HOM05D007599 ORTHO05D009548 6.3e-10 67.0 68 55.9
HanXRQChr17g0534931 Helianthus annuus HOM05D007599 ORTHO05D009548 6.3e-10 67.0 64 56.2
Os02g0682600 Oryza sativa ssp. japonica HOM05D007599 ORTHO05D009548 1.4e-09 65.9 68 54.4
Gohir.D12G243500 Gossypium hirsutum HOM05D007599 ORTHO05D009548 1.8e-09 65.5 65 90.8
Gorai.008G260900 Gossypium raimondii HOM05D007599 ORTHO05D009548 1.8e-09 65.5 65 90.8
Oeu029803.1 Olea europaea HOM05D007599 ORTHO05D009548 1.8e-09 65.5 68 52.9
Duzib068G0772 Durio zibethinus HOM05D007599 ORTHO05D009548 2.4e-09 65.1 68 85.3
Migut.E00717 Erythranthe guttata HOM05D007599 ORTHO05D009548 2.4e-09 65.1 64 70.3
Actinidia27277 Actinidia chinensis HOM05D007599 ORTHO05D009548 5.4e-09 63.9 68 88.2
ClCG01G001340 Citrullus lanatus HOM05D007599 ORTHO05D009548 5.4e-09 63.9 67 53.7
Ciclev10023088m.g Citrus clementina HOM05D007599 ORTHO05D009548 5.4e-09 63.9 68 63.2
Cc08_g17030 Coffea canephora HOM05D007599 ORTHO05D009548 5.4e-09 63.9 63 92.1
MELO3C005802.2 Cucumis melo HOM05D007599 ORTHO05D009548 5.4e-09 63.9 67 59.7
CsaV3_5G001470 Cucumis sativus L. HOM05D007599 ORTHO05D009548 5.4e-09 63.9 67 59.7
Gohir.A12G242400 Gossypium hirsutum HOM05D007599 ORTHO05D009548 7.0e-09 63.5 64 64.1
unitig_62.g23260 Utricularia gibba HOM05D007599 ORTHO05D009548 7.0e-09 63.5 64 54.7
CiPaw.12G074700 Carya illinoinensis HOM05D007599 ORTHO05D009548 1.2e-08 62.8 64 89.1
Sed0012861 Sechium edule HOM05D007599 ORTHO05D009548 1.2e-08 62.8 67 52.2
Sp5g30310 Schrenkiella parvula HOM05D007599 ORTHO05D009548 1.6e-08 62.4 68 77.9
Solyc08g083380.2 Solanum lycopersicum HOM05D007599 ORTHO05D009548 2.0e-08 62.0 64 54.7
Sopen10g024670 Solanum pennellii HOM05D007599 ORTHO05D009548 2.0e-08 62.0 64 51.6
PGSC0003DMG400012109 Solanum tuberosum HOM05D007599 ORTHO05D009548 2.0e-08 62.0 64 54.7
PSO135G0169 Papaver somniferum HOM05D007599 ORTHO05D009548 2.7e-08 61.6 68 86.8
PSO384G2353 Papaver somniferum HOM05D007599 ORTHO05D009548 2.7e-08 61.6 68 86.8
AL2G14680 Arabidopsis lyrata HOM05D007599 ORTHO05D009548 4.5e-08 60.8 64 50.0
Thhalv10019387m.g Eutrema salsugineum HOM05D007599 ORTHO05D009548 5.9e-08 60.5 68 47.1
Mapoly0015s0046 Marchantia polymorpha HOM05D007599 ORTHO05D009548 5.9e-08 60.5 69 52.2
CSS0029258 Camellia sinensis var. sinensis HOM05D007599 ORTHO05D009548 7.7e-08 60.1 68 83.8
Carub.0002s0362 Capsella rubella HOM05D007599 ORTHO05D009548 7.7e-08 60.1 68 80.9
Atru.chr9.1835 Acer truncatum HOM05D007599 ORTHO05D009548 3.8e-07 57.8 68 45.6
MSTRG.12224 Avicennia marina HOM05D007599 ORTHO05D009548 5.0e-07 57.4 58 53.4
BcaC08g46942 Brassica carinata HOM05D007599 ORTHO05D009548 8.6e-07 56.6 68 79.4
C06p49140 Brassica napus HOM05D007599 ORTHO05D009548 8.6e-07 56.6 68 79.4
CARHR050820 Cardamine hirsuta HOM05D007599 ORTHO05D009548 8.6e-07 56.6 68 76.5
Pp3c25_10700 Physcomitrium patens HOM05D007599 ORTHO05D009548 8.6e-07 56.6 69 56.5
CDE11G1025 Ceratophyllum demersum HOM05D007599 ORTHO05D009548 1.5e-06 55.8 64 73.4
AagrBONN_evm.TU.Sc2ySwM_117.1837 Anthoceros agrestis HOM05D007599 ORTHO05D009548 3.3e-06 54.7 69 46.4
CBR_g48723 Chara braunii HOM05D007599 ORTHO05D009548 3.3e-06 54.7 64 81.2
BolC6t39948H Brassica oleracea HOM05D001180 ORTHO05D001055 4.2e-06 54.3 64 81.2


User provided reference genes

Program Settings