Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G1483 Trochodendron aralioides HOM05D003935 ORTHO05D005096 4.8e-185 651.0 321 100.0
Nn6g33882 Nelumbo nucifera HOM05D003935 ORTHO05D005096 9.5e-173 610.1 315 93.7
CSS0046772 Camellia sinensis var. sinensis HOM05D003935 ORTHO05D005096 1.5e-170 602.8 315 93.7
Dinv16851 Davidia involucrata HOM05D003935 ORTHO05D005096 2.9e-169 598.6 315 92.7
Aqoxy7G00829 Aquilegia oxysepala HOM05D003935 ORTHO05D005096 1.1e-168 596.7 315 91.7
TWI14G1423 Tripterygium wilfordii HOM05D003935 ORTHO05D005096 2.4e-168 595.5 315 91.1
GSVIVG01018224001 Vitis vinifera HOM05D003935 ORTHO05D005096 1.2e-167 593.2 315 91.4
Hma1.2p1_0432F.1_g151940 Hydrangea macrophylla HOM05D003935 ORTHO05D005096 7.8e-167 590.5 315 91.7
Manes.06G132800 Manihot esculenta HOM05D003935 ORTHO05D005096 7.8e-167 590.5 315 90.8
Thecc.01G388100 Theobroma cacao HOM05D003935 ORTHO05D005096 1.3e-166 589.7 315 91.4
Hma1.2p1_1132F.1_g260170 Hydrangea macrophylla HOM05D003935 ORTHO05D005096 1.7e-166 589.3 315 92.1
COL.COLO4_12445 Corchorus olitorius HOM05D003935 ORTHO05D005096 2.3e-166 589.0 315 90.8
CSS0045715 Camellia sinensis var. sinensis HOM05D003935 ORTHO05D005096 1.5e-165 586.3 315 91.4
Eucgr.K00175 Eucalyptus grandis HOM05D003935 ORTHO05D005096 3.3e-165 585.1 315 90.2
Potri.001G126500 Populus trichocarpa HOM05D003935 ORTHO05D005096 3.3e-165 585.1 316 90.5
CANSAT21G2109 Cannabis sativa HOM05D003935 ORTHO05D005096 5.6e-165 584.3 315 89.2
Duzib133G0969 Durio zibethinus HOM05D003935 ORTHO05D005096 7.3e-165 583.9 316 91.1
vmacro09915 Vaccinium macrocarpon HOM05D003935 ORTHO05D005096 9.5e-165 583.6 315 90.8
Migut.F00500 Erythranthe guttata HOM05D003935 ORTHO05D005096 1.6e-164 582.8 315 90.2
Lalb_Chr19g0126281 Lupinus albus HOM05D003935 ORTHO05D005096 2.8e-164 582.0 315 88.3
PGR142G1672 Punica granatum HOM05D003935 ORTHO05D005096 6.2e-164 580.9 314 89.2
Actinidia01047 Actinidia chinensis HOM05D003935 ORTHO05D005096 5.2e-163 577.8 315 89.2
Cfa012922 Carpinus fangiana HOM05D003935 ORTHO05D005096 5.2e-163 577.8 315 87.9
PSO782G0781 Papaver somniferum HOM05D003935 ORTHO05D005096 6.8e-163 577.4 317 90.2
Oeu031400.2 Olea europaea HOM05D003935 ORTHO05D005096 8.9e-163 577.0 316 89.2
MSTRG.27208 Avicennia marina HOM05D003935 ORTHO05D005096 2.6e-162 575.5 315 88.3
PSO063G2499 Papaver somniferum HOM05D003935 ORTHO05D005096 2.6e-162 575.5 317 89.9
Rhsim09G0190400 Rhododendron simsii HOM05D003935 ORTHO05D005096 3.4e-162 575.1 330 86.7
Gohir.D08G159150 Gossypium hirsutum HOM05D003935 ORTHO05D005096 4.4e-162 574.7 316 90.2
QL04p034713 Quercus lobata HOM05D003935 ORTHO05D005096 5.8e-162 574.3 315 90.5
Gorai.004G165200 Gossypium raimondii HOM05D003935 ORTHO05D005096 7.5e-162 573.9 316 90.2
Glyma.09G231000 Glycine max HOM05D003935 ORTHO05D005096 9.8e-162 573.5 315 87.6
Lj1C977G12 Lonicera japonica HOM05D003935 ORTHO05D005096 9.8e-162 573.5 338 84.3
Lalb_Chr01g0000281 Lupinus albus HOM05D003935 ORTHO05D005096 2.2e-161 572.4 315 87.9
AUR62002246 Chenopodium quinoa HOM05D003935 ORTHO05D005096 2.9e-161 572.0 313 88.5
Duzib138G0818 Durio zibethinus HOM05D003935 ORTHO05D005096 2.9e-161 572.0 316 89.9
Gohir.A08G137866 Gossypium hirsutum HOM05D003935 ORTHO05D005096 2.9e-161 572.0 316 89.6
SGA_v2.0_scaffold44G16558 Striga asiatica HOM05D003935 ORTHO05D005096 2.9e-161 572.0 313 87.5
Gohir.D07G154200 Gossypium hirsutum HOM05D003935 ORTHO05D005096 4.9e-161 571.2 316 89.6
Gorai.001G176400 Gossypium raimondii HOM05D003935 ORTHO05D005096 4.9e-161 571.2 316 89.6
Atru.chr1.845 Acer truncatum HOM05D003935 ORTHO05D005096 2.4e-160 568.9 313 87.2
Cpa.g.sc16.168 Carica papaya HOM05D003935 ORTHO05D005096 3.2e-160 568.5 315 87.3
Gohir.A07G148000 Gossypium hirsutum HOM05D003935 ORTHO05D005096 7.0e-160 567.4 316 88.6
Lj3g0013928 Lotus japonicus HOM05D003935 ORTHO05D005096 7.0e-160 567.4 315 85.7
Potri.003G107000 Populus trichocarpa HOM05D003935 ORTHO05D005096 7.0e-160 567.4 317 88.6
SalBow1G3743 Salvia bowleyana HOM05D003935 ORTHO05D005096 7.0e-160 567.4 315 87.3
Actinidia13591 Actinidia chinensis HOM05D003935 ORTHO05D005096 6.0e-159 564.3 309 89.6
Sopen06g010820 Solanum pennellii HOM05D003935 ORTHO05D005096 6.0e-159 564.3 315 87.6
TPR.G3680 Trifolium pratense HOM05D003935 ORTHO05D005096 6.0e-159 564.3 315 86.7
MSTRG.8834 Avicennia marina HOM05D003935 ORTHO05D005096 7.8e-159 563.9 315 86.7
Glyma.12G005700 Glycine max HOM05D003935 ORTHO05D005096 1.0e-158 563.5 315 86.7
QL02p025668 Quercus lobata HOM05D003935 ORTHO05D005096 1.3e-158 563.1 314 86.9
Solyc06g034160.3 Solanum lycopersicum HOM05D003935 ORTHO05D005096 1.3e-158 563.1 315 87.3
CAN.G330.5 Capsicum annuum HOM05D003935 ORTHO05D005096 2.3e-158 562.4 315 87.3
Medtr4g036265 Medicago truncatula HOM05D003935 ORTHO05D005096 3.9e-158 561.6 315 86.0
CiPaw.14G023500 Carya illinoinensis HOM05D003935 ORTHO05D005096 5.0e-158 561.2 315 85.7
DCAR_020181 Daucus carota HOM05D003935 ORTHO05D005096 6.6e-158 560.8 315 86.0
Sabra01G0097600 Salix brachista HOM05D003935 ORTHO05D005096 6.6e-158 560.8 316 86.1
CARHR275270 Cardamine hirsuta HOM05D003935 ORTHO05D005096 1.5e-157 559.7 315 85.1
Psat7g207040 Pisum sativum HOM05D003935 ORTHO05D005096 1.5e-157 559.7 315 85.7
Sed0016106 Sechium edule HOM05D003935 ORTHO05D005096 1.5e-157 559.7 314 85.4
AL8G38190 Arabidopsis lyrata HOM05D003935 ORTHO05D005096 1.9e-157 559.3 315 84.8
Peaxi162Scf00304g01342 Petunia axillaris HOM05D003935 ORTHO05D005096 1.9e-157 559.3 315 86.3
arahy.Tifrunner.gnm1.ann1.YZL4IN Arachis hypogaea HOM05D003935 ORTHO05D005096 4.3e-157 558.1 314 86.9
ClCG06G002480 Citrullus lanatus HOM05D003935 ORTHO05D005096 4.3e-157 558.1 314 84.7
Nitab4.5_0000448g0060 Nicotiana tabacum HOM05D003935 ORTHO05D005096 4.3e-157 558.1 315 86.7
Sp2g24700 Schrenkiella parvula HOM05D003935 ORTHO05D005096 4.3e-157 558.1 315 85.4
MELO3C022280.2 Cucumis melo HOM05D003935 ORTHO05D005096 5.6e-157 557.8 314 84.4
CsaV3_6G008640 Cucumis sativus L. HOM05D003935 ORTHO05D005096 5.6e-157 557.8 314 85.0
Thhalv10004633m.g Eutrema salsugineum HOM05D003935 ORTHO05D005096 5.6e-157 557.8 316 85.8
PGSC0003DMG400021594 Solanum tuberosum HOM05D003935 ORTHO05D005096 1.6e-156 556.2 315 86.3
AT5G61500 Arabidopsis thaliana HOM05D003935 ORTHO05D005096 2.8e-156 555.4 315 84.4
Carub.0008s2219 Capsella rubella HOM05D003935 ORTHO05D005096 3.6e-156 555.1 315 84.4
THA.LOC104801570 Tarenaya hassleriana HOM05D003935 ORTHO05D005096 6.2e-156 554.3 315 85.4
Haze_21276 Corylus avellana HOM05D003935 ORTHO05D005096 1.1e-155 553.5 322 84.2
CDE04G2838 Ceratophyllum demersum HOM05D003935 ORTHO05D005096 1.8e-155 552.7 306 87.6
THA.LOC104819415 Tarenaya hassleriana HOM05D003935 ORTHO05D005096 3.1e-155 552.0 314 86.0
HanXRQChr15g0485951 Helianthus annuus HOM05D003935 ORTHO05D005096 1.5e-154 549.7 315 83.5
Lsat_1_v5_gn_5_9340 Lactuca sativa HOM05D003935 ORTHO05D005096 2.0e-154 549.3 315 83.5
Phvul.011G006500 Phaseolus vulgaris HOM05D003935 ORTHO05D005096 2.0e-154 549.3 315 84.8
VMungo1127G0071 Vigna mungo HOM05D003935 ORTHO05D005096 2.6e-154 548.9 315 84.1
Thhalv10014155m.g Eutrema salsugineum HOM05D003935 ORTHO05D005096 3.4e-154 548.5 315 84.8
Nitab4.5_0000262g0090 Nicotiana tabacum HOM05D003935 ORTHO05D005096 4.4e-154 548.1 315 86.0
Sp6g35250 Schrenkiella parvula HOM05D003935 ORTHO05D005096 4.4e-154 548.1 315 84.4
BcaC06g33155 Brassica carinata HOM05D003935 ORTHO05D005096 9.9e-154 547.0 315 83.2
Rhsim03G0165100 Rhododendron simsii HOM05D003935 ORTHO05D005096 9.9e-154 547.0 339 80.5
Cc02_g04470 Coffea canephora HOM05D003935 ORTHO05D005096 1.7e-153 546.2 319 82.4
Prupe.2G123000 Prunus persica HOM05D003935 ORTHO05D005096 2.9e-153 545.4 315 85.4
FAN03G1633 Fragaria x ananassa HOM05D003935 ORTHO05D005096 3.2e-152 542.0 317 85.5
Sabra03G0073800 Salix brachista HOM05D003935 ORTHO05D005096 3.2e-152 542.0 383 73.9
unitig_37.g12492 Utricularia gibba HOM05D003935 ORTHO05D005096 5.4e-152 541.2 315 84.8
Aa31LG11G1910 Aethionema arabicum HOM05D003935 ORTHO05D005096 7.1e-152 540.8 312 83.3
FAN01G1603 Fragaria x ananassa HOM05D003935 ORTHO05D005096 7.1e-152 540.8 317 85.5
FvH4_7g09530 Fragaria vesca HOM05D003935 ORTHO05D005096 9.2e-152 540.4 317 85.2
FAN06G5089 Fragaria x ananassa HOM05D003935 ORTHO05D005096 9.2e-152 540.4 317 85.2
arahy.Tifrunner.gnm1.ann1.2B4GQV Arachis hypogaea HOM05D003935 ORTHO05D005096 1.2e-151 540.0 311 84.6
FAN06G4162 Fragaria x ananassa HOM05D003935 ORTHO05D005096 1.6e-151 539.7 317 85.2
HanXRQChr16g0512861 Helianthus annuus HOM05D003935 ORTHO05D005096 2.1e-151 539.3 315 82.2
FAN10G2569 Fragaria x ananassa HOM05D003935 ORTHO05D005096 2.7e-151 538.9 317 84.9
FAN10G4028 Fragaria x ananassa HOM05D003935 ORTHO05D005096 2.7e-151 538.9 317 84.9
arahy.Tifrunner.gnm1.ann1.16SP4W Arachis hypogaea HOM05D003935 ORTHO05D005096 6.0e-151 537.7 314 83.8
MD02G1218100 Malus domestica HOM05D003935 ORTHO05D005096 1.3e-150 536.6 315 84.8
RcHm_v2.0_Chr1g0346321 Rosa chinensis HOM05D003935 ORTHO05D005096 3.9e-150 535.0 318 85.2
BolC7t45044H Brassica oleracea HOM05D003935 ORTHO05D005096 1.9e-149 532.7 316 81.6
Hund04562 Selenicereus undatus HOM05D003935 ORTHO05D005096 5.6e-149 531.2 310 83.2
C07p45210 Brassica napus HOM05D003935 ORTHO05D005096 1.2e-148 530.0 316 81.3
Ciclev10005442m.g Citrus clementina HOM05D003935 ORTHO05D005096 2.4e-147 525.8 322 81.7
arahy.Tifrunner.gnm1.ann1.9TCX0P Arachis hypogaea HOM05D003935 ORTHO05D005096 8.9e-147 523.9 311 83.3
BcaB05g21604 Brassica carinata HOM05D003935 ORTHO05D005096 4.4e-146 521.5 317 81.7
EL10Ac3g05885 Beta vulgaris HOM05D003935 ORTHO05D005096 2.9e-145 518.8 285 87.7
BolC2t06285H Brassica oleracea HOM05D003935 ORTHO05D005096 2.9e-145 518.8 318 81.8
Ah.07g207480 Amaranthus hybridus HOM05D003935 ORTHO05D005096 2.4e-144 515.8 288 86.8
Sc10g0008570 Simmondsia chinensis HOM05D003935 ORTHO05D005096 2.1e-143 512.7 283 87.3
ECA232G4201 Erigeron canadensis HOM05D003935 ORTHO05D005096 1.7e-142 509.6 294 82.0
BcaC03g13194 Brassica carinata HOM05D003935 ORTHO05D005096 2.5e-141 505.8 318 80.2
Nitab4.5_0001267g0110 Nicotiana tabacum HOM05D003935 ORTHO05D005096 4.3e-141 505.0 282 86.5
Haze_02753 Corylus avellana HOM05D003935 ORTHO05D005096 1.6e-140 503.1 463 60.0
CiPaw.07G237000 Carya illinoinensis HOM05D003935 ORTHO05D005096 8.1e-140 500.7 326 76.7
BraA02t04926Z Brassica rapa HOM05D003935 ORTHO05D005096 1.8e-139 499.6 315 79.7
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 3.1e-139 498.8 314 79.6
Ca_12623_v3 Cicer arietinum L. HOM05D003935 ORTHO05D005096 6.9e-139 497.7 315 78.1
Mapoly0003s0208 Marchantia polymorpha HOM05D003935 ORTHO05D005096 2.0e-138 496.1 320 75.3
Aa31LG3G18800 Aethionema arabicum HOM05D003935 ORTHO05D005096 3.8e-137 491.9 313 79.6
BraA03t13837Z Brassica rapa HOM05D003935 ORTHO05D005096 1.2e-135 486.9 315 77.1
A03p47100 Brassica napus HOM05D003935 ORTHO05D005096 3.5e-135 485.3 315 76.8
Lsat_1_v5_gn_9_51820 Lactuca sativa HOM05D003935 ORTHO05D005096 3.6e-132 475.3 313 76.0
Pp3c8_11900 Physcomitrium patens HOM05D003935 ORTHO05D005096 4.8e-132 474.9 310 74.5
Actinidia24986 Actinidia chinensis HOM05D003935 ORTHO05D005096 4.6e-127 458.4 240 92.1
Os01g0200000 Oryza sativa ssp. japonica HOM05D003935 ORTHO05D005096 4.8e-124 448.4 318 70.4
SMO134G0003 Selaginella moellendorffii HOM05D003935 ORTHO05D005096 7.6e-122 441.0 312 67.3
ATR0057G070 Amborella trichopoda HOM05D003935 ORTHO05D005096 1.9e-120 436.4 284 74.3
BcaC06g33158 Brassica carinata HOM05D003935 ORTHO05D005096 3.5e-119 432.2 262 80.9
Zm00001eb391210 Zea mays HOM05D003935 ORTHO05D005096 4.8e-116 421.8 314 67.5
AUR62015457 Chenopodium quinoa HOM05D003935 ORTHO05D005096 1.5e-101 373.6 213 84.0
Dinv06578 Davidia involucrata HOM05D003935 ORTHO05D005096 7.2e-88 328.2 172 91.3
Nitab4.5_0001358g0020 Nicotiana tabacum HOM05D003935 ORTHO05D005096 1.7e-84 317.0 177 85.3
CBR_g28076 Chara braunii HOM05D003935 ORTHO05D000002 6.3e-84 315.1 252 61.5
MD07G1099100 Malus domestica HOM05D003935 ORTHO05D005096 1.9e-80 303.5 192 78.1
MCO14G260 Micromonas commoda HOM05D003935 ORTHO05D005096 6.5e-73 278.5 315 50.2
Nn051s41922 Nelumbo nucifera HOM05D003935 ORTHO05D005096 6.5e-73 278.5 151 87.4
Nn1g09078 Nelumbo nucifera HOM05D003935 ORTHO05D005096 6.5e-73 278.5 151 87.4
arahy.Tifrunner.gnm1.ann1.VY970J Arachis hypogaea HOM05D003935 ORTHO05D005096 1.1e-72 277.7 166 81.3
Cre02.g102350 Chlamydomonas reinhardtii HOM05D003935 ORTHO05D005096 1.2e-71 274.2 312 48.4
AagrBONN_evm.TU.Sc2ySwM_369.216 Anthoceros agrestis HOM05D003935 ORTHO05D005096 8.8e-70 268.1 272 52.9
SEGI_20183 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 1.5e-64 250.8 168 70.2
arahy.Tifrunner.gnm1.ann1.XHAQ77 Arachis hypogaea HOM05D003935 ORTHO05D005096 1.0e-62 244.6 186 68.8
CsaV3_4G004080 Cucumis sativus L. HOM05D003935 ORTHO05D044846 2.8e-60 236.5 280 50.4
Nitab4.5_0001358g0040 Nicotiana tabacum HOM05D003935 ORTHO05D001473 7.8e-58 228.4 112 95.5
Haze_27326 Corylus avellana HOM05D003935 ORTHO05D005096 2.5e-56 223.4 306 42.5
PRCOL_00004022 Prasinoderma coloniale HOM05D003935 ORTHO05D005096 9.5e-56 221.5 300 42.0
Os10g0560450 Oryza sativa ssp. japonica HOM05D003935 ORTHO05D005096 2.0e-53 213.8 185 60.5
Rhsim01G0073400 Rhododendron simsii HOM05D003935 ORTHO05D005096 5.4e-51 205.7 149 72.5
Rhsim06G0236800 Rhododendron simsii HOM05D003935 ORTHO05D005096 1.3e-49 201.1 142 72.5
MELO3C032833.2 Cucumis melo HOM05D003935 ORTHO05D044846 3.3e-48 196.4 304 44.4
Rhsim11G0131000 Rhododendron simsii HOM05D003935 ORTHO05D005096 1.2e-45 188.0 179 58.7
SEGI_13739 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 9.8e-45 184.9 103 84.5
Zm00001eb363440 Zea mays HOM05D003935 ORTHO05D005096 9.8e-45 184.9 113 74.3
Zm00001eb003720 Zea mays HOM05D003935 ORTHO05D005096 3.7e-44 183.0 113 73.5
Zm00001eb078430 Zea mays HOM05D003935 ORTHO05D005096 3.7e-44 183.0 113 73.5
Zm00001eb216570 Zea mays HOM05D003935 ORTHO05D005096 3.7e-44 183.0 129 67.4
BcaB05g21605 Brassica carinata HOM05D003935 ORTHO05D005096 1.1e-43 181.4 136 67.6
AL7G47000 Arabidopsis lyrata HOM05D003935 ORTHO05D003430 1.1e-38 164.9 170 52.4
Rhsim06G0096100 Rhododendron simsii HOM05D003935 ORTHO05D005096 2.0e-37 160.6 116 72.4
Lj2A404G32 Lonicera japonica HOM05D000092 ORTHO05D000042 2.9e-36 156.8 277 35.7
BcaB01g00746 Brassica carinata HOM05D003935 ORTHO05D005096 1.9e-32 144.1 108 67.6
BcaC04g19029 Brassica carinata HOM05D003935 ORTHO05D005096 3.4e-29 133.3 114 60.5
SEGI_32586 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 7.1e-27 125.6 68 83.8
A09p20840 Brassica napus HOM05D000772 ORTHO05D003239 1.7e-25 120.9 80 75.0
BraA09t37687Z Brassica rapa HOM05D000772 ORTHO05D003239 1.7e-25 120.9 80 75.0
MD07G1099000 Malus domestica HOM05D003935 ORTHO05D005096 1.5e-24 117.9 60 88.3
Actinidia10778 Actinidia chinensis HOM05D003935 ORTHO05D005096 1.6e-23 114.4 89 71.9
CBR_g28077 Chara braunii HOM05D003935 ORTHO05D005096 4.9e-20 102.8 72 63.9
arahy.Tifrunner.gnm1.ann1.W2J7UU Arachis hypogaea HOM05D003935 ORTHO05D023770 1.4e-19 101.3 55 85.5
Lj9A23G20 Lonicera japonica HOM05D000092 ORTHO05D000042 1.2e-18 98.2 117 44.4
C03p26610 Brassica napus HOM05D003935 ORTHO05D023770 2.1e-18 97.4 53 86.8
Rhsim12G0075300 Rhododendron simsii HOM05D016728 ORTHO05D338590 1.5e-16 91.3 101 53.5
SalBow2G0135 Salvia bowleyana HOM05D003935 ORTHO05D357983 4.3e-16 89.7 47 87.2
Zm00001eb269920 Zea mays HOM05D001580 ORTHO05D001517 1.3e-15 88.2 52 80.8
BcaC03g17887 Brassica carinata HOM05D003935 ORTHO05D005096 3.9e-09 66.6 44 68.2
BcaC02g10492 Brassica carinata HOM05D036142 ORTHO05D023770 2.8e-07 60.5 94 41.5
C04p28240 Brassica napus HOM05D036142 ORTHO05D023770 2.8e-07 60.5 94 41.5
BolC4t24369H Brassica oleracea HOM05D036142 ORTHO05D023770 2.8e-07 60.5 94 41.5
Zm00001eb395010 Zea mays HOM05D034860 ORTHO05D442630 6.2e-07 59.3 37 64.9
Zm00001eb363380 Zea mays HOM05D003935 ORTHO05D445556 5.3e-06 56.2 37 62.2


User provided reference genes

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