Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G1471 Trochodendron aralioides HOM05D004533 ORTHO05D005347 1.4e-137 493.0 258 100.0
TAR629G1049 Trochodendron aralioides HOM05D004533 ORTHO05D005347 7.6e-80 301.2 256 66.0
Hma1.2p1_0428F.1_g151070 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 2.7e-77 292.7 262 67.2
Manes.01G025900 Manihot esculenta HOM05D004533 ORTHO05D005347 3.5e-77 292.4 255 62.0
Gohir.A03G105900 Gossypium hirsutum HOM05D004533 ORTHO05D005347 4.3e-75 285.4 256 62.5
QL03p073504 Quercus lobata HOM05D004533 ORTHO05D005347 4.4e-72 275.4 265 60.8
Hma1.2p1_3075F.1_g332390 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 6.6e-68 261.5 262 60.3
Duzib268G0904 Durio zibethinus HOM05D004533 ORTHO05D005347 5.6e-67 258.5 257 54.5
Haze_11876 Corylus avellana HOM05D004533 ORTHO05D005347 2.8e-66 256.1 260 59.6
Gohir.D02G131100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.8e-65 253.4 256 55.1
Manes.05G112100 Manihot esculenta HOM05D004533 ORTHO05D005347 1.5e-64 250.4 254 55.1
Thecc.02G326400 Theobroma cacao HOM05D004533 ORTHO05D005347 2.6e-64 249.6 257 54.5
Duzib248G0866 Durio zibethinus HOM05D004533 ORTHO05D005347 7.6e-64 248.1 258 54.7
Gohir.D13G084000 Gossypium hirsutum HOM05D004533 ORTHO05D005347 3.8e-63 245.7 258 53.9
Gorai.013G095800 Gossypium raimondii HOM05D004533 ORTHO05D005347 3.8e-63 245.7 258 53.9
Duzib251G0596 Durio zibethinus HOM05D004533 ORTHO05D005347 4.9e-63 245.4 257 53.7
Gohir.A13G084500 Gossypium hirsutum HOM05D004533 ORTHO05D005347 4.9e-63 245.4 258 53.9
Gorai.005G147000 Gossypium raimondii HOM05D004533 ORTHO05D005347 6.4e-63 245.0 256 53.9
CiPaw.05G123000 Carya illinoinensis HOM05D004533 ORTHO05D005347 1.4e-62 243.8 258 55.4
Sabra10G0118800 Salix brachista HOM05D004533 ORTHO05D005347 1.2e-61 240.7 264 54.2
Potri.010G154200 Populus trichocarpa HOM05D004533 ORTHO05D005347 8.7e-60 234.6 264 53.8
Dinv20147 Davidia involucrata HOM05D004533 ORTHO05D005347 2.1e-58 229.9 251 56.2
Aqoxy3G03701 Aquilegia oxysepala HOM05D004533 ORTHO05D005347 8.1e-58 228.0 261 52.1
Lalb_Chr10g0099071 Lupinus albus HOM05D004533 ORTHO05D005347 2.9e-55 219.5 257 53.3
Potri.008G098200 Populus trichocarpa HOM05D004533 ORTHO05D005347 3.8e-55 219.2 263 50.6
Cfa008857 Carpinus fangiana HOM05D004533 ORTHO05D005347 2.5e-54 216.5 259 52.9
Lj2g0015000 Lotus japonicus HOM05D004533 ORTHO05D005347 4.2e-54 215.7 252 55.2
TAR371G0131 Trochodendron aralioides HOM05D004533 ORTHO05D005347 3.5e-53 212.6 257 50.2
Cc11_g11730 Coffea canephora HOM05D004533 ORTHO05D005347 4.6e-53 212.2 264 49.6
CiPaw.06G093700 Carya illinoinensis HOM05D004533 ORTHO05D005347 7.9e-53 211.5 267 53.2
MSTRG.2297 Avicennia marina HOM05D004533 ORTHO05D005347 1.3e-52 210.7 268 50.4
Hma1.2p1_0473F.1_g160260 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 1.3e-52 210.7 243 52.7
Nn4g23503 Nelumbo nucifera HOM05D004533 ORTHO05D005347 1.3e-52 210.7 263 50.6
Phvul.003G039500 Phaseolus vulgaris HOM05D004533 ORTHO05D005347 3.0e-52 209.5 272 52.2
Lalb_Chr17g0341371 Lupinus albus HOM05D004533 ORTHO05D005347 3.9e-52 209.1 256 51.6
Gorai.008G175700 Gossypium raimondii HOM05D004533 ORTHO05D005347 5.3e-49 198.7 257 51.4
Rhsim09G0125000 Rhododendron simsii HOM05D004533 ORTHO05D005347 1.5e-48 197.2 265 50.6
Lj6P776T6 Lonicera japonica HOM05D004533 ORTHO05D005347 3.4e-48 196.1 200 60.5
Oeu020361.1 Olea europaea HOM05D004533 ORTHO05D005347 3.4e-48 196.1 244 47.5
Actinidia26533 Actinidia chinensis HOM05D004533 ORTHO05D005347 2.2e-47 193.4 259 51.7
Sabra08G0074200 Salix brachista HOM05D004533 ORTHO05D005347 2.9e-47 193.0 265 47.2
Dinv34043 Davidia involucrata HOM05D004533 ORTHO05D005347 6.5e-47 191.8 256 50.0
Psat2g098360 Pisum sativum HOM05D004533 ORTHO05D005347 2.5e-46 189.9 254 49.6
Sed0020971 Sechium edule HOM05D004533 ORTHO05D005347 4.2e-46 189.1 270 46.7
Oeu028724.1 Olea europaea HOM05D004533 ORTHO05D005347 9.3e-46 188.0 258 42.6
Ciclev10032087m.g Citrus clementina HOM05D004533 ORTHO05D005347 2.7e-45 186.4 283 46.3
Actinidia16147 Actinidia chinensis HOM05D004533 ORTHO05D005347 6.1e-45 185.3 248 52.0
Peaxi162Scf00175g00062 Petunia axillaris HOM05D004533 ORTHO05D005347 6.1e-45 185.3 285 47.7
PSO478G4496 Papaver somniferum HOM05D004533 ORTHO05D005347 7.9e-45 184.9 246 51.2
PSO017G3527 Papaver somniferum HOM05D004533 ORTHO05D005347 1.0e-44 184.5 287 47.0
Medtr5g046750 Medicago truncatula HOM05D004533 ORTHO05D005347 1.3e-44 184.1 258 48.8
Oeu048133.1 Olea europaea HOM05D004533 ORTHO05D005347 1.8e-44 183.7 259 47.9
Oeu048134.1 Olea europaea HOM05D004533 ORTHO05D005347 1.8e-44 183.7 259 47.9
vmacro01308 Vaccinium macrocarpon HOM05D004533 ORTHO05D005347 1.8e-44 183.7 271 46.5
Rhsim12G0073600 Rhododendron simsii HOM05D004533 ORTHO05D005347 1.3e-42 177.6 268 48.1
EL10Ac6g15027 Beta vulgaris HOM05D004533 ORTHO05D005347 4.8e-42 175.6 225 51.6
CSS0048067 Camellia sinensis var. sinensis HOM05D004533 ORTHO05D005347 8.2e-42 174.9 269 46.5
Prupe.1G290400 Prunus persica HOM05D004533 ORTHO05D005347 8.2e-42 174.9 293 45.4
ClCG08G010520 Citrullus lanatus HOM05D004533 ORTHO05D005347 3.8e-39 166.0 286 44.4
Glyma.01G063800 Glycine max HOM05D004533 ORTHO05D005347 3.8e-39 166.0 283 45.2
MELO3C011411.2 Cucumis melo HOM05D004533 ORTHO05D005347 5.0e-39 165.6 290 44.1
COL.COLO4_27845 Corchorus olitorius HOM05D004533 ORTHO05D005347 8.5e-39 164.9 277 41.9
Eucgr.B03139 Eucalyptus grandis HOM05D004533 ORTHO05D005347 1.4e-38 164.1 276 43.8
CsaV3_6G033770 Cucumis sativus L. HOM05D004533 ORTHO05D005347 2.5e-38 163.3 288 42.7
DCAR_026684 Daucus carota HOM05D004533 ORTHO05D005347 4.2e-38 162.5 285 43.2
MSTRG.13457 Avicennia marina HOM05D004533 ORTHO05D005347 5.5e-38 162.2 264 42.8
Cpa.g.sc1.160 Carica papaya HOM05D004533 ORTHO05D005347 5.5e-38 162.2 274 43.4
TPR.G38582 Trifolium pratense HOM05D004533 ORTHO05D005347 1.6e-37 160.6 255 45.5
Gohir.D12G163100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 3.6e-37 159.5 257 44.0
TWI79G0987 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 3.9e-36 156.0 269 42.8
Gohir.A12G159800 Gossypium hirsutum HOM05D004533 ORTHO05D005347 5.1e-36 155.6 259 43.6
Atru.chr11.1592 Acer truncatum HOM05D004533 ORTHO05D005347 1.5e-35 154.1 282 39.7
Glyma.02G121400 Glycine max HOM05D004533 ORTHO05D005347 5.7e-35 152.1 287 43.2
ECA233G1177 Erigeron canadensis HOM05D004533 ORTHO05D005347 7.4e-35 151.8 274 43.4
Ca_05043_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 1.3e-34 151.0 256 43.8
Ca_19594_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 1.3e-34 151.0 256 43.8
TWI75G1153 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 4.8e-34 149.1 267 41.6
Actinidia19907 Actinidia chinensis HOM05D004533 ORTHO05D005347 1.4e-33 147.5 256 42.6
ATR0827G049 Amborella trichopoda HOM05D004533 ORTHO05D005347 1.4e-33 147.5 249 41.0
Ah.03g138730 Amaranthus hybridus HOM05D004533 ORTHO05D005347 5.3e-33 145.6 280 43.9
ECA234G4159 Erigeron canadensis HOM05D004533 ORTHO05D005347 9.1e-33 144.8 250 43.6
MBI16_g39936_MAGBIO Magnolia biondii HOM05D004533 ORTHO05D005347 1.5e-32 144.1 256 43.0
TWI31G0640 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 5.9e-32 142.1 262 41.6
Nn3g17512 Nelumbo nucifera HOM05D004533 ORTHO05D005347 3.8e-31 139.4 231 41.6
Lsat_1_v5_gn_8_45920 Lactuca sativa HOM05D004533 ORTHO05D005347 8.5e-31 138.3 273 41.8
Lsat_1_v5_gn_4_11700 Lactuca sativa HOM05D004533 ORTHO05D005347 1.1e-30 137.9 249 42.2
DCAR_023748 Daucus carota HOM05D004533 ORTHO05D005347 7.2e-30 135.2 282 41.8
DCAR_030051 Daucus carota HOM05D004533 ORTHO05D005347 7.9e-29 131.7 268 40.3
MD16G1058700 Malus domestica HOM05D004533 ORTHO05D005347 2.3e-28 130.2 284 39.4
MD13G1059400 Malus domestica HOM05D004533 ORTHO05D005347 8.8e-28 128.3 278 39.2
Sc11g0002570 Simmondsia chinensis HOM05D004533 ORTHO05D005347 7.4e-27 125.2 273 39.9
arahy.Tifrunner.gnm1.ann1.PV72KB Arachis hypogaea HOM05D004533 ORTHO05D005347 1.7e-26 124.0 292 35.6
Nitab4.5_0006154g0010 Nicotiana tabacum HOM05D004533 ORTHO05D005347 2.8e-26 123.2 265 39.6
Sp5g24200 Schrenkiella parvula HOM05D004533 ORTHO05D005347 8.2e-26 121.7 269 36.4
FAN17G0049 Fragaria x ananassa HOM05D004533 ORTHO05D005347 2.4e-25 120.2 284 39.8
PGSC0003DMG400028307 Solanum tuberosum HOM05D004533 ORTHO05D005347 3.1e-25 119.8 249 38.2
VMungo1215G1442 Vigna mungo HOM05D004533 ORTHO05D005347 3.1e-25 119.8 157 52.9
HanXRQChr12g0363201 Helianthus annuus HOM05D004533 ORTHO05D005347 7.0e-25 118.6 271 39.9
Nitab4.5_0000027g0050 Nicotiana tabacum HOM05D004533 ORTHO05D005347 7.0e-25 118.6 253 38.7
FAN07G1881 Fragaria x ananassa HOM05D004533 ORTHO05D005347 9.1e-25 118.2 285 40.0
FAN22G0793 Fragaria x ananassa HOM05D004533 ORTHO05D005347 2.6e-24 116.7 282 39.7
TAR381G0317 Trochodendron aralioides HOM05D004533 ORTHO05D005347 2.6e-24 116.7 115 57.4
arahy.Tifrunner.gnm1.ann1.NK9Z7F Arachis hypogaea HOM05D004533 ORTHO05D005347 3.5e-24 116.3 292 34.2
FvH4_4g29630 Fragaria vesca HOM05D004533 ORTHO05D005347 3.5e-24 116.3 284 39.4
FAN12G3098 Fragaria x ananassa HOM05D004533 ORTHO05D005347 3.5e-24 116.3 284 39.4
Actinidia13399 Actinidia chinensis HOM05D004533 ORTHO05D005347 4.5e-24 115.9 178 47.8
SGA_v2.0_scaffold287G47174 Striga asiatica HOM05D004533 ORTHO05D005347 1.0e-23 114.8 251 36.3
BraA02t06624Z Brassica rapa HOM05D004533 ORTHO05D005347 1.3e-23 114.4 274 34.7
BcaB03g15876 Brassica carinata HOM05D004533 ORTHO05D005347 2.2e-23 113.6 264 35.2
Carub.0002s1576 Capsella rubella HOM05D004533 ORTHO05D005347 2.2e-23 113.6 269 34.6
BraA07t31139Z Brassica rapa HOM05D004533 ORTHO05D005347 5.0e-23 112.5 271 34.7
TAR627G0820 Trochodendron aralioides HOM05D004533 ORTHO05D005347 6.5e-23 112.1 113 55.8
Solyc05g012030.1 Solanum lycopersicum HOM05D004533 ORTHO05D005347 8.5e-23 111.7 287 33.8
Sopen05g006810 Solanum pennellii HOM05D004533 ORTHO05D005347 8.5e-23 111.7 280 34.6
THA.LOC104798855 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 8.5e-23 111.7 276 34.4
THA.LOC104803161 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 8.5e-23 111.7 276 34.4
THA.LOC104822894 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 8.5e-23 111.7 276 34.4
AT1G69160 Arabidopsis thaliana HOM05D004533 ORTHO05D005347 1.1e-22 111.3 278 34.9
Ah.02g126770 Amaranthus hybridus HOM05D004533 ORTHO05D005347 1.5e-22 110.9 256 38.7
A07p35490 Brassica napus HOM05D004533 ORTHO05D005347 1.5e-22 110.9 267 36.0
MSTRG.7732 Avicennia marina HOM05D004533 ORTHO05D005347 2.5e-22 110.2 265 35.5
BcaC08g46370 Brassica carinata HOM05D004533 ORTHO05D005347 9.4e-22 108.2 269 34.2
BolC6t39358H Brassica oleracea HOM05D004533 ORTHO05D005347 9.4e-22 108.2 269 34.2
C06p40740 Brassica napus HOM05D004533 ORTHO05D005347 2.1e-21 107.1 269 34.2
CsaV3_5G033410 Cucumis sativus L. HOM05D004533 ORTHO05D005347 2.1e-21 107.1 258 35.7
Thhalv10018878m.g Eutrema salsugineum HOM05D004533 ORTHO05D005347 2.1e-21 107.1 270 33.7
AL2G28250 Arabidopsis lyrata HOM05D004533 ORTHO05D005347 2.7e-21 106.7 273 33.3
Sed0009680 Sechium edule HOM05D004533 ORTHO05D005347 2.7e-21 106.7 250 38.0
THA.LOC104821996 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 1.0e-20 104.8 275 34.2
A02p15640 Brassica napus HOM05D004533 ORTHO05D005347 1.8e-20 104.0 274 33.6
Aa31LG4G11830 Aethionema arabicum HOM05D004533 ORTHO05D005347 2.3e-20 103.6 257 36.2
RcHm_v2.0_Chr4g0437861 Rosa chinensis HOM05D004533 ORTHO05D005347 4.0e-20 102.8 286 37.1
MELO3C012160.2 Cucumis melo HOM05D004533 ORTHO05D005347 5.2e-20 102.4 258 34.1
DCAR_007202 Daucus carota HOM05D004533 ORTHO05D005347 6.7e-20 102.1 256 35.5
BolC2t08676H Brassica oleracea HOM05D004533 ORTHO05D005347 1.5e-19 100.9 269 32.0
CARHR062030 Cardamine hirsuta HOM05D004533 ORTHO05D005347 2.6e-19 100.1 269 31.2
C02p26000 Brassica napus HOM05D004533 ORTHO05D005347 5.7e-19 99.0 268 31.7
PSO063G5982 Papaver somniferum HOM05D004533 ORTHO05D005347 2.2e-18 97.1 271 36.9
TAR629G3385 Trochodendron aralioides HOM05D004533 ORTHO05D005347 6.3e-18 95.5 146 45.2
PSO782G4709 Papaver somniferum HOM05D004533 ORTHO05D005347 7.0e-17 92.0 236 38.6
BcaC03g15057 Brassica carinata HOM05D004533 ORTHO05D005347 4.5e-16 89.4 269 30.5
ClCG05G023610 Citrullus lanatus HOM05D004533 ORTHO05D005347 5.9e-16 89.0 259 33.6
PGR102G1315 Punica granatum HOM05D004533 ORTHO05D005347 5.0e-15 85.9 246 35.0
BcaC08g45911 Brassica carinata HOM05D004533 ORTHO05D005347 1.1e-14 84.7 273 29.3
BcaC08g45912 Brassica carinata HOM05D004533 ORTHO05D005347 1.9e-14 84.0 275 29.1
Sc04g0007440 Simmondsia chinensis HOM05D004533 ORTHO05D005347 1.9e-14 84.0 275 35.3
TAR452G0003 Trochodendron aralioides HOM05D004533 ORTHO05D005347 2.7e-13 80.1 69 62.3
CDE02G4104 Ceratophyllum demersum HOM05D004533 ORTHO05D005347 2.6e-11 73.6 209 34.4
PGR119G0103 Punica granatum HOM05D004533 ORTHO05D005347 2.6e-11 73.6 281 31.3
CANSAT64G2295 Cannabis sativa HOM05D004533 ORTHO05D005347 2.2e-10 70.5 44 81.8
Atru.chr1.3909 Acer truncatum HOM05D001488 ORTHO05D001456 1.4e-09 67.8 222 31.1
Hma1.2p1_0291F.1_g115200 Hydrangea macrophylla HOM05D001488 ORTHO05D001456 1.2e-08 64.7 228 30.7
Lsat_1_v5_gn_1_37441 Lactuca sativa HOM05D001488 ORTHO05D001456 1.2e-08 64.7 236 29.7
BcaC08g45913 Brassica carinata HOM05D004533 ORTHO05D005347 2.0e-08 63.9 154 31.8
CANSAT56G0195 Cannabis sativa HOM05D001488 ORTHO05D001456 3.5e-08 63.2 229 30.1
Duzib187G1885 Durio zibethinus HOM05D001488 ORTHO05D001456 1.0e-07 61.6 242 29.8
A01p39640 Brassica napus HOM05D001488 ORTHO05D001456 3.8e-07 59.7 221 31.2
BraA01t04005Z Brassica rapa HOM05D001488 ORTHO05D001456 3.8e-07 59.7 221 31.2
Peaxi162Scf00038g01811 Petunia axillaris HOM05D001488 ORTHO05D001456 3.8e-07 59.7 230 32.2
Duzib187G1785 Durio zibethinus HOM05D001488 ORTHO05D001456 6.5e-07 58.9 230 32.2
Thecc.09G061200 Theobroma cacao HOM05D001488 ORTHO05D001456 8.5e-07 58.5 247 31.6
Lsat_1_v5_gn_5_135800 Lactuca sativa HOM05D001488 ORTHO05D001456 1.1e-06 58.2 234 29.1
Sabra06G0172100 Salix brachista HOM05D001488 ORTHO05D001456 1.1e-06 58.2 248 29.0
TWI34G1323 Tripterygium wilfordii HOM05D001488 ORTHO05D001456 1.1e-06 58.2 251 29.9
Actinidia32178 Actinidia chinensis HOM05D001488 ORTHO05D001456 1.5e-06 57.8 228 29.8
Duzib168G0244 Durio zibethinus HOM05D001488 ORTHO05D001456 1.5e-06 57.8 238 30.7
Duzib168G1997 Durio zibethinus HOM05D001488 ORTHO05D001456 1.5e-06 57.8 244 30.7
Lj5C38T14 Lonicera japonica HOM05D001488 ORTHO05D001456 1.9e-06 57.4 236 30.1
Carub.0003s1356 Capsella rubella HOM05D001488 ORTHO05D001456 3.2e-06 56.6 225 30.7
Migut.E00039 Erythranthe guttata HOM05D004533 ORTHO05D005347 3.2e-06 56.6 258 27.1
Rhsim08G0237500 Rhododendron simsii HOM05D001488 ORTHO05D001456 4.2e-06 56.2 233 30.5
TPR.G16451 Trifolium pratense HOM05D001488 ORTHO05D001456 4.2e-06 56.2 227 30.4
Medtr3g104880 Medicago truncatula HOM05D001488 ORTHO05D001456 5.5e-06 55.8 264 29.2
Aqoxy7G01095 Aquilegia oxysepala HOM05D001488 ORTHO05D001456 7.2e-06 55.5 235 29.4
CiPaw.15G090100 Carya illinoinensis HOM05D001488 ORTHO05D001456 7.2e-06 55.5 232 29.7
ECA247G0079 Erigeron canadensis HOM05D001488 ORTHO05D001456 7.2e-06 55.5 234 30.8
Thhalv10022002m.g Eutrema salsugineum HOM05D001488 ORTHO05D001456 7.2e-06 55.5 228 31.1
PGSC0003DMG400002570 Solanum tuberosum HOM05D001488 ORTHO05D001456 7.2e-06 55.5 234 31.2
Dinv25581 Davidia involucrata HOM05D001488 ORTHO05D001456 9.4e-06 55.1 214 29.9
HanXRQChr10g0312441 Helianthus annuus HOM05D001488 ORTHO05D001456 9.4e-06 55.1 230 29.1
Nitab4.5_0002879g0080 Nicotiana tabacum HOM05D001488 ORTHO05D001456 9.4e-06 55.1 229 31.9
Potri.018G049900 Populus trichocarpa HOM05D001488 ORTHO05D001456 9.4e-06 55.1 259 30.5
TAR626G0456 Trochodendron aralioides HOM05D001488 ORTHO05D001456 9.4e-06 55.1 220 30.5


User provided reference genes

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