Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G1208 Trochodendron aralioides HOM05D004687 ORTHO05D006002 0.0e+00 1175.2 604 100.0
Dinv32519 Davidia involucrata HOM05D004687 ORTHO05D006002 1.7e-194 683.3 602 62.8
GSVIVG01026963001 Vitis vinifera HOM05D004687 ORTHO05D006002 7.2e-174 614.8 600 56.7
Nn1g01677 Nelumbo nucifera HOM05D004687 ORTHO05D006002 9.5e-174 614.4 602 58.0
CiPaw.02G034500 Carya illinoinensis HOM05D004687 ORTHO05D006002 1.7e-170 603.6 609 57.1
Aqoxy7G00187 Aquilegia oxysepala HOM05D004687 ORTHO05D006002 7.3e-166 588.2 629 55.3
CANSAT56G3669 Cannabis sativa HOM05D004687 ORTHO05D006002 4.4e-163 578.9 602 55.0
Cfa003875 Carpinus fangiana HOM05D004687 ORTHO05D006002 6.4e-162 575.1 570 58.4
Lj7A508T42 Lonicera japonica HOM05D004687 ORTHO05D006002 1.4e-161 573.9 603 54.4
CSS0026327 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 5.6e-158 562.0 601 54.9
QL04p055402 Quercus lobata HOM05D004687 ORTHO05D006002 2.3e-156 556.6 701 48.8
Manes.01G252600 Manihot esculenta HOM05D004687 ORTHO05D006002 1.9e-153 547.0 601 53.2
PSO478G3840 Papaver somniferum HOM05D004687 ORTHO05D006002 7.8e-152 541.6 614 50.2
Sc01g0003240 Simmondsia chinensis HOM05D004687 ORTHO05D006002 1.0e-151 541.2 600 52.3
Atru.chr5.577 Acer truncatum HOM05D004687 ORTHO05D006002 1.3e-151 540.8 604 51.8
Cc02_g38540 Coffea canephora HOM05D004687 ORTHO05D006002 8.6e-151 538.1 612 53.1
MBI04_g26968_MAGBIO Magnolia biondii HOM05D004687 ORTHO05D006002 7.3e-150 535.0 611 53.5
Atru.chr5.560 Acer truncatum HOM05D004687 ORTHO05D006002 3.6e-149 532.7 604 51.3
Nitab4.5_0000915g0140 Nicotiana tabacum HOM05D004687 ORTHO05D006002 4.4e-147 525.8 606 51.7
Solyc01g095090.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 2.4e-145 520.0 600 51.3
Prupe.2G177100 Prunus persica HOM05D004687 ORTHO05D006002 5.4e-145 518.8 598 51.0
Sabra14G0065300 Salix brachista HOM05D004687 ORTHO05D006002 1.3e-143 514.2 580 52.1
TWI14G1112 Tripterygium wilfordii HOM05D004687 ORTHO05D006002 6.6e-143 511.9 605 51.2
Peaxi162Scf00020g01410 Petunia axillaris HOM05D004687 ORTHO05D006002 1.9e-142 510.4 608 50.8
Rhsim07G0010800 Rhododendron simsii HOM05D004687 ORTHO05D006002 1.2e-141 507.7 647 48.4
PGSC0003DMG400000194 Solanum tuberosum HOM05D004687 ORTHO05D006002 3.6e-141 506.1 653 48.4
Oeu063679.1 Olea europaea HOM05D004687 ORTHO05D006002 1.8e-140 503.8 609 49.6
PSO266G0021 Papaver somniferum HOM05D004687 ORTHO05D006002 1.2e-139 501.1 626 47.1
Thecc.01G352900 Theobroma cacao HOM05D004687 ORTHO05D006002 1.2e-139 501.1 602 50.0
Lj3g0008911 Lotus japonicus HOM05D004687 ORTHO05D006002 9.9e-139 498.0 602 48.8
Ciclev10019565m.g Citrus clementina HOM05D004687 ORTHO05D006002 2.2e-138 496.9 610 49.2
MSTRG.20861 Avicennia marina HOM05D004687 ORTHO05D006002 3.8e-138 496.1 596 48.5
Cpa.g.sc184.31 Carica papaya HOM05D004687 ORTHO05D006002 1.9e-137 493.8 600 49.8
Glyma.16G032000 Glycine max HOM05D004687 ORTHO05D006002 6.6e-135 485.3 604 49.7
Migut.B01796 Erythranthe guttata HOM05D004687 ORTHO05D006002 1.1e-134 484.6 603 48.6
Potri.014G089800 Populus trichocarpa HOM05D004687 ORTHO05D006002 1.9e-134 483.8 565 51.9
Gorai.007G103300 Gossypium raimondii HOM05D004687 ORTHO05D006002 9.6e-134 481.5 601 49.4
Gohir.D11G097000 Gossypium hirsutum HOM05D004687 ORTHO05D006002 2.8e-133 479.9 601 49.1
Lalb_Chr10g0096671 Lupinus albus HOM05D004687 ORTHO05D006002 2.8e-133 479.9 601 48.8
COL.COLO4_12774 Corchorus olitorius HOM05D004687 ORTHO05D006002 4.4e-131 472.6 604 48.7
Nitab4.5_0009238g0010 Nicotiana tabacum HOM05D004687 ORTHO05D006002 1.3e-130 471.1 608 48.4
Sed0003221 Sechium edule HOM05D004687 ORTHO05D006002 2.2e-130 470.3 595 48.9
Duzib138G0011 Durio zibethinus HOM05D004687 ORTHO05D006002 4.9e-130 469.2 605 48.4
Medtr8g028580 Medicago truncatula HOM05D004687 ORTHO05D006002 4.9e-130 469.2 603 47.4
Eucgr.D02323 Eucalyptus grandis HOM05D004687 ORTHO05D006002 1.9e-129 467.2 611 47.5
Psat4g212240 Pisum sativum HOM05D004687 ORTHO05D006002 1.9e-129 467.2 607 48.9
Phvul.010G104100 Phaseolus vulgaris HOM05D004687 ORTHO05D006002 3.2e-129 466.5 601 49.3
RcHm_v2.0_Chr1g0357651 Rosa chinensis HOM05D004687 ORTHO05D006002 2.7e-128 463.4 623 47.4
ClCG06G003410 Citrullus lanatus HOM05D004687 ORTHO05D006002 1.0e-127 461.5 614 47.6
Haze_15561 Corylus avellana HOM05D004687 ORTHO05D006002 1.3e-127 461.1 601 48.9
VMungo0331G0070 Vigna mungo HOM05D004687 ORTHO05D006002 8.7e-127 458.4 600 48.7
DCAR_006947 Daucus carota HOM05D004687 ORTHO05D006002 1.5e-126 457.6 566 48.2
MD01G1070600 Malus domestica HOM05D004687 ORTHO05D006002 1.9e-126 457.2 601 47.4
FAN10G0227 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.5e-126 456.8 621 46.9
FvH4_7g15320 Fragaria vesca HOM05D004687 ORTHO05D006002 1.4e-124 451.1 621 46.4
FAN06G2065 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.4e-124 451.1 621 46.4
Ca_03498_v3 Cicer arietinum L. HOM05D004687 ORTHO05D006002 6.9e-124 448.7 606 46.5
Actinidia20159 Actinidia chinensis HOM05D004687 ORTHO05D006002 9.0e-124 448.4 602 47.3
FAN06G2774 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.6e-123 446.8 621 46.1
PGR031G1931 Punica granatum HOM05D004687 ORTHO05D006002 5.8e-123 445.7 606 48.2
Peaxi162Scf00403g00830 Petunia axillaris HOM05D004687 ORTHO05D006002 9.9e-123 444.9 534 49.3
arahy.Tifrunner.gnm1.ann1.X9JZY0 Arachis hypogaea HOM05D004687 ORTHO05D006002 1.7e-122 444.1 622 45.2
arahy.Tifrunner.gnm1.ann1.PSKN5N Arachis hypogaea HOM05D004687 ORTHO05D006002 3.8e-122 443.0 623 45.6
Hund27243 Selenicereus undatus HOM05D004687 ORTHO05D006002 4.2e-121 439.5 596 47.3
CSS0036615 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 7.1e-121 438.7 561 48.0
CSS0041346 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 1.5e-118 431.0 492 52.6
MELO3C021180.2 Cucumis melo HOM05D004687 ORTHO05D006002 3.2e-113 413.3 652 43.6
FAN10G4173 Fragaria x ananassa HOM05D004687 ORTHO05D006002 5.6e-110 402.5 621 43.6
PGSC0003DMG400033881 Solanum tuberosum HOM05D004687 ORTHO05D006002 9.6e-110 401.7 525 47.4
Lsat_1_v5_gn_7_3881 Lactuca sativa HOM05D004687 ORTHO05D006002 1.1e-108 398.3 609 43.7
THA.LOC104817038 Tarenaya hassleriana HOM05D004687 ORTHO05D006002 1.4e-108 397.9 596 44.8
Solyc05g050020.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 6.9e-108 395.6 522 46.4
ATR0661G462 Amborella trichopoda HOM05D004687 ORTHO05D006002 3.4e-107 393.3 622 41.8
Sopen05g028410 Solanum pennellii HOM05D004687 ORTHO05D006002 4.5e-107 392.9 522 46.2
TPR.G28289 Trifolium pratense HOM05D004687 ORTHO05D006002 5.8e-107 392.5 570 44.6
CSS0021310 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 1.9e-105 387.5 561 44.2
SalBow3G3455 Salvia bowleyana HOM05D004687 ORTHO05D006002 1.0e-103 381.7 651 39.6
Aa31LG5G750 Aethionema arabicum HOM05D004687 ORTHO05D006002 1.2e-99 368.2 605 40.8
AUR62004410 Chenopodium quinoa HOM05D004687 ORTHO05D006002 8.5e-98 362.1 605 40.0
A03p31950 Brassica napus HOM05D004687 ORTHO05D006002 5.5e-97 359.4 608 40.0
C03p38970 Brassica napus HOM05D004687 ORTHO05D006002 5.5e-97 359.4 604 40.7
BolC3t16169H Brassica oleracea HOM05D004687 ORTHO05D006002 5.5e-97 359.4 604 40.2
BraA03t12367Z Brassica rapa HOM05D004687 ORTHO05D006002 5.5e-97 359.4 604 39.9
ECA236G1242 Erigeron canadensis HOM05D004687 ORTHO05D006002 5.5e-97 359.4 604 40.6
SGA_v2.0_scaffold95G28807 Striga asiatica HOM05D004687 ORTHO05D006002 7.2e-97 359.0 620 41.0
Ah.05g180180 Amaranthus hybridus HOM05D004687 ORTHO05D006002 6.1e-96 355.9 292 65.1
BcaC01g06853 Brassica carinata HOM05D004687 ORTHO05D006002 1.0e-95 355.1 604 40.2
Thhalv10029490m.g Eutrema salsugineum HOM05D004687 ORTHO05D006002 1.8e-95 354.4 604 39.4
AT4G01270 Arabidopsis thaliana HOM05D004687 ORTHO05D006002 3.0e-95 353.6 604 39.6
CARHR249040 Cardamine hirsuta HOM05D004687 ORTHO05D006002 8.8e-95 352.1 606 40.3
Carub.0006s3633 Capsella rubella HOM05D004687 ORTHO05D006002 1.1e-94 351.7 604 39.4
Sp6g00860 Schrenkiella parvula HOM05D004687 ORTHO05D006002 2.0e-94 350.9 615 39.3
BcaB01g02150 Brassica carinata HOM05D004687 ORTHO05D006002 6.3e-93 345.9 604 39.9
AL6G52120 Arabidopsis lyrata HOM05D004687 ORTHO05D006002 5.3e-92 342.8 605 38.7
BraA09t35739Z Brassica rapa HOM05D004687 ORTHO05D006002 4.5e-91 339.7 604 39.9
BcaC04g24137 Brassica carinata HOM05D004687 ORTHO05D006002 7.7e-91 339.0 605 40.0
C09p00700 Brassica napus HOM05D004687 ORTHO05D006002 7.7e-91 339.0 605 40.0
BolC9t53004H Brassica oleracea HOM05D004687 ORTHO05D006002 7.7e-91 339.0 605 40.0
A09p00090 Brassica napus HOM05D004687 ORTHO05D006002 1.3e-90 338.2 605 39.3
unitig_699.g19806 Utricularia gibba HOM05D004687 ORTHO05D006002 1.7e-90 337.8 556 41.7
vmacro13232 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 8.5e-90 335.5 318 59.7
SEGI_33633 Sequoiadendron giganteum HOM05D004687 ORTHO05D006002 1.1e-89 335.1 620 38.9
FAN01G0098 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.7e-88 330.5 508 44.9
Prupe.2G177000 Prunus persica HOM05D004687 ORTHO05D006002 1.4e-87 328.2 516 41.9
HanXRQChr06g0170331 Helianthus annuus HOM05D004687 ORTHO05D006002 1.7e-85 321.2 595 38.2
CsaV3_6G000900 Cucumis sativus L. HOM05D004687 ORTHO05D006002 1.2e-83 315.1 530 42.5
HanXRQChr04g0120761 Helianthus annuus HOM05D004687 ORTHO05D006002 2.0e-83 314.3 607 37.4
EL10Ac1g00358 Beta vulgaris HOM05D004687 ORTHO05D006002 6.5e-82 309.3 593 39.0
Zm00001eb416420 Zea mays HOM05D004687 ORTHO05D006002 6.5e-82 309.3 604 36.1
MD01G1070500 Malus domestica HOM05D004687 ORTHO05D006002 7.2e-81 305.8 527 38.7
AUR62022616 Chenopodium quinoa HOM05D004687 ORTHO05D006002 1.8e-79 301.2 515 40.4
Os08g0151700 Oryza sativa ssp. japonica HOM05D004687 ORTHO05D006002 1.1e-76 292.0 617 35.2
BcaB01g02289 Brassica carinata HOM05D004687 ORTHO05D006002 2.9e-74 283.9 609 36.9
Gohir.A11G092200 Gossypium hirsutum HOM05D004687 ORTHO05D006002 8.5e-74 282.3 460 43.3
Nitab4.5_0002262g0080 Nicotiana tabacum HOM05D004687 ORTHO05D006002 3.4e-70 270.4 527 36.6
FAN03G2011 Fragaria x ananassa HOM05D004687 ORTHO05D006002 7.5e-70 269.2 435 43.7
Lalb_Chr17g0339021 Lupinus albus HOM05D004687 ORTHO05D006002 1.4e-68 265.0 226 63.3
FvH4_1g19860 Fragaria vesca HOM05D004687 ORTHO05D006002 3.1e-60 237.3 269 51.3
FAN19G0767 Fragaria x ananassa HOM05D004687 ORTHO05D006002 9.1e-60 235.7 269 50.9
FAN28G2978 Fragaria x ananassa HOM05D004687 ORTHO05D006002 7.7e-59 232.6 269 50.6
RcHm_v2.0_Chr2g0111671 Rosa chinensis HOM05D004687 ORTHO05D006002 3.3e-57 227.3 622 31.7
SGA_v2.0_scaffold95G28804 Striga asiatica HOM05D004687 ORTHO05D006002 2.8e-56 224.2 308 45.1
FAN26G2006 Fragaria x ananassa HOM05D004687 ORTHO05D006002 3.6e-56 223.8 271 49.8
Nitab4.5_0003779g0080 Nicotiana tabacum HOM05D004687 ORTHO05D006002 4.7e-56 223.4 490 34.9
Pp3c23_12760 Physcomitrium patens HOM05D004687 ORTHO05D006002 2.6e-54 217.6 622 31.2
CDE11G0743 Ceratophyllum demersum HOM05D002440 ORTHO05D002576 4.9e-53 213.4 438 37.9
SMO147G0044 Selaginella moellendorffii HOM05D004687 ORTHO05D006002 7.0e-52 209.5 278 43.5
Potri.002G164000 Populus trichocarpa HOM05D004687 ORTHO05D006002 8.0e-48 196.1 327 41.0
Actinidia10067 Actinidia chinensis HOM05D004687 ORTHO05D006002 2.0e-46 191.4 390 40.0
Lalb_Chr17g0339031 Lupinus albus HOM05D004687 ORTHO05D006002 2.0e-43 181.4 373 37.3
Sopen01g038880 Solanum pennellii HOM05D004687 ORTHO05D006002 1.7e-42 178.3 335 39.1
vmacro13233 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 3.9e-42 177.2 165 56.4
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 1.9e-41 174.9 118 69.5
FAN23G1626 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.4e-36 157.9 527 29.0
SHI13366 Sapria himalayana HOM05D004687 ORTHO05D006002 6.0e-35 153.3 165 49.7
MD01G1071100 Malus domestica HOM05D004687 ORTHO05D006002 3.3e-33 147.5 99 70.7
Actinidia20138 Actinidia chinensis HOM05D004687 ORTHO05D006002 7.3e-33 146.4 118 61.0
QL06p033484 Quercus lobata HOM05D004687 ORTHO05D006002 7.3e-33 146.4 118 55.1
CBR_g45680 Chara braunii HOM05D004687 ORTHO05D006002 2.4e-28 131.3 289 31.1
SHI13367 Sapria himalayana HOM05D004687 ORTHO05D006002 3.5e-27 127.5 437 30.4
ATR0804G028 Amborella trichopoda HOM05D004687 ORTHO05D006002 1.3e-26 125.6 130 56.2
Aa31sc194G60 Aethionema arabicum HOM05D004687 ORTHO05D006002 2.1e-24 118.2 140 49.3
COL.COLO4_21921 Corchorus olitorius HOM05D004687 ORTHO05D006002 9.3e-20 102.8 106 49.1
PSO541G1518 Papaver somniferum HOM05D004687 ORTHO05D006002 2.8e-16 91.3 158 38.6
SGA_v2.0_scaffold95G28808 Striga asiatica HOM05D005821 ORTHO05D006649 1.8e-15 88.6 101 51.5
Mapoly0091s0017 Marchantia polymorpha HOM05D004687 ORTHO05D006002 5.8e-14 83.6 283 26.5
Ca_03421_v3 Cicer arietinum L. HOM05D004687 ORTHO05D006002 3.8e-13 80.9 125 45.6
C03p85080 Brassica napus HOM05D004224 ORTHO05D016135 1.2e-06 59.3 50 60.0
BraA03t10099Z Brassica rapa HOM05D004687 ORTHO05D016135 2.0e-06 58.5 61 52.5
A03p47890 Brassica napus HOM05D004687 ORTHO05D016135 2.6e-06 58.2 61 52.5
BraA03t13898Z Brassica rapa HOM05D004687 ORTHO05D016135 2.6e-06 58.2 61 52.5
C02p16100 Brassica napus HOM05D004224 ORTHO05D016135 4.5e-06 57.4 66 48.5
BolC7t44656H Brassica oleracea HOM05D004687 ORTHO05D016135 4.5e-06 57.4 52 57.7


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