Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G1105 Trochodendron aralioides HOM05D007070 ORTHO05D008892 2.0e-104 382.5 196 100.0
TAR622G0001 Trochodendron aralioides HOM05D007070 ORTHO05D008892 1.1e-91 340.1 196 89.3
Aqoxy3G03327 Aquilegia oxysepala HOM05D007070 ORTHO05D008892 1.2e-72 276.9 203 73.9
Hma1.2p1_0598F.1_g186810 Hydrangea macrophylla HOM05D007070 ORTHO05D008892 1.5e-72 276.6 195 75.9
Manes.05G098800 Manihot esculenta HOM05D007070 ORTHO05D008892 8.3e-71 270.8 187 75.9
TWI75G1629 Tripterygium wilfordii HOM05D007070 ORTHO05D008892 1.1e-70 270.4 199 71.9
Haze_12036 Corylus avellana HOM05D007070 ORTHO05D008892 3.2e-70 268.9 198 73.2
CiPaw.05G138000 Carya illinoinensis HOM05D007070 ORTHO05D008892 1.6e-69 266.5 202 73.3
Duzib251G0126 Durio zibethinus HOM05D007070 ORTHO05D008892 2.1e-69 266.2 206 70.9
PSO832G2327 Papaver somniferum HOM05D007070 ORTHO05D008892 2.1e-69 266.2 200 73.0
Potri.010G093300 Populus trichocarpa HOM05D007070 ORTHO05D008892 2.7e-69 265.8 201 70.1
CSS0037166 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 7.8e-69 264.2 197 73.1
CSS0050316 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 7.8e-69 264.2 197 73.1
Thecc.02G352500 Theobroma cacao HOM05D007070 ORTHO05D008892 7.8e-69 264.2 213 70.4
Cpa.g.sc183.28 Carica papaya HOM05D007070 ORTHO05D008892 2.3e-68 262.7 199 72.4
MD13G1074900 Malus domestica HOM05D007070 ORTHO05D008892 2.3e-68 262.7 205 69.3
Sabra10G0065800 Salix brachista HOM05D007070 ORTHO05D008892 3.0e-68 262.3 201 70.1
Gohir.A13G072600 Gossypium hirsutum HOM05D007070 ORTHO05D008892 6.6e-68 261.2 211 68.7
Lj3P1040T26 Lonicera japonica HOM05D007070 ORTHO05D008892 1.9e-67 259.6 199 72.4
PSO591G0158 Papaver somniferum HOM05D007070 ORTHO05D008892 1.9e-67 259.6 200 71.5
Prupe.1G271300 Prunus persica HOM05D007070 ORTHO05D008892 1.9e-67 259.6 205 69.3
COL.COLO4_22972 Corchorus olitorius HOM05D007070 ORTHO05D008892 3.3e-67 258.8 212 68.9
Dinv34174 Davidia involucrata HOM05D007070 ORTHO05D008892 3.3e-67 258.8 157 83.4
Atru.chr11.1834 Acer truncatum HOM05D007070 ORTHO05D008892 4.3e-67 258.5 206 70.4
Duzib268G0688 Durio zibethinus HOM05D007070 ORTHO05D008892 4.3e-67 258.5 217 67.3
FAN17G0782 Fragaria x ananassa HOM05D007070 ORTHO05D008892 5.6e-67 258.1 175 76.6
Actinidia31196 Actinidia chinensis HOM05D007070 ORTHO05D008892 7.3e-67 257.7 190 72.6
FAN07G2888 Fragaria x ananassa HOM05D007070 ORTHO05D008892 7.3e-67 257.7 164 78.7
Gorai.013G083500 Gossypium raimondii HOM05D007070 ORTHO05D008892 7.3e-67 257.7 211 68.7
Gohir.D13G072700 Gossypium hirsutum HOM05D007070 ORTHO05D008892 1.2e-66 256.9 211 68.7
RcHm_v2.0_Chr4g0440151 Rosa chinensis HOM05D007070 ORTHO05D008892 2.1e-66 256.1 169 76.3
QL03p064901 Quercus lobata HOM05D007070 ORTHO05D008892 2.8e-66 255.8 207 69.6
FvH4_4g31650 Fragaria vesca HOM05D007070 ORTHO05D008892 3.6e-66 255.4 161 79.5
FAN12G3127 Fragaria x ananassa HOM05D007070 ORTHO05D008892 4.7e-66 255.0 161 79.5
FAN22G1781 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.2e-64 250.4 157 79.6
Ah.02g131260 Amaranthus hybridus HOM05D007070 ORTHO05D008892 1.5e-64 250.0 179 74.3
Lalb_Chr10g0098121 Lupinus albus HOM05D007070 ORTHO05D008892 2.0e-64 249.6 205 65.9
Sed0007814 Sechium edule HOM05D007070 ORTHO05D008892 2.0e-64 249.6 197 66.0
MELO3C012078.2 Cucumis melo HOM05D007070 ORTHO05D008892 2.6e-64 249.2 196 67.9
Medtr5g038970 Medicago truncatula HOM05D007070 ORTHO05D008892 2.6e-64 249.2 202 68.3
DCAR_007140 Daucus carota HOM05D007070 ORTHO05D008892 3.4e-64 248.8 195 69.7
Lsat_1_v5_gn_8_52140 Lactuca sativa HOM05D007070 ORTHO05D008892 3.4e-64 248.8 187 68.4
arahy.Tifrunner.gnm1.ann1.P1GF9J Arachis hypogaea HOM05D007070 ORTHO05D008892 4.4e-64 248.4 203 68.0
Ciclev10032797m.g Citrus clementina HOM05D007070 ORTHO05D008892 4.4e-64 248.4 200 69.0
CDE05G3062 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 5.8e-64 248.1 198 67.7
arahy.Tifrunner.gnm1.ann1.H49BTR Arachis hypogaea HOM05D007070 ORTHO05D008892 7.5e-64 247.7 203 68.5
ATR0564G356 Amborella trichopoda HOM05D007070 ORTHO05D008892 2.2e-63 246.1 197 65.0
Cc11_g13320 Coffea canephora HOM05D007070 ORTHO05D008892 2.2e-63 246.1 200 70.0
PGR119G1526 Punica granatum HOM05D007070 ORTHO05D008892 2.2e-63 246.1 204 66.7
Solyc01g010640.3 Solanum lycopersicum HOM05D007070 ORTHO05D008892 3.7e-63 245.4 197 67.0
Nitab4.5_0000141g0310 Nicotiana tabacum HOM05D007070 ORTHO05D008892 4.9e-63 245.0 196 66.8
Sopen01g006270 Solanum pennellii HOM05D007070 ORTHO05D008892 4.9e-63 245.0 198 68.2
CsaV3_5G032500 Cucumis sativus L. HOM05D007070 ORTHO05D008892 8.3e-63 244.2 197 67.0
SGA_v2.0_scaffold302G47841 Striga asiatica HOM05D007070 ORTHO05D008892 8.3e-63 244.2 197 65.5
Nitab4.5_0012600g0010 Nicotiana tabacum HOM05D007070 ORTHO05D008892 1.4e-62 243.4 198 65.7
Sc04g0008310 Simmondsia chinensis HOM05D007070 ORTHO05D008892 1.4e-62 243.4 172 74.4
PGSC0003DMG400000874 Solanum tuberosum HOM05D007070 ORTHO05D008892 1.4e-62 243.4 199 68.3
Migut.L01320 Erythranthe guttata HOM05D007070 ORTHO05D008892 1.9e-62 243.0 178 70.8
MSTRG.13406 Avicennia marina HOM05D007070 ORTHO05D008892 2.4e-62 242.7 191 67.5
Glyma.01G044500 Glycine max HOM05D007070 ORTHO05D008892 4.1e-62 241.9 205 67.3
VMungo1215G0639 Vigna mungo HOM05D007070 ORTHO05D008892 5.4e-62 241.5 205 65.4
Glyma.02G019200 Glycine max HOM05D007070 ORTHO05D008892 2.1e-61 239.6 197 65.0
AUR62005745 Chenopodium quinoa HOM05D007070 ORTHO05D008892 1.7e-60 236.5 200 65.5
Phvul.002G088700 Phaseolus vulgaris HOM05D007070 ORTHO05D008892 1.7e-60 236.5 201 64.7
Eucgr.G02521 Eucalyptus grandis HOM05D007070 ORTHO05D008892 2.3e-60 236.1 168 72.0
MBI05_g00391_MAGBIO Magnolia biondii HOM05D007070 ORTHO05D008892 2.3e-60 236.1 186 71.0
AT1G14345 Arabidopsis thaliana HOM05D007070 ORTHO05D008892 5.1e-60 235.0 193 65.3
CAN.G375.28 Capsicum annuum HOM05D007070 ORTHO05D008892 6.6e-60 234.6 198 66.2
Ca_04760_v3 Cicer arietinum L. HOM05D007070 ORTHO05D008892 6.6e-60 234.6 201 64.2
SalBow2G0737 Salvia bowleyana HOM05D007070 ORTHO05D008892 6.6e-60 234.6 180 66.1
SalBow2G1571 Salvia bowleyana HOM05D007070 ORTHO05D008892 6.6e-60 234.6 180 66.1
CANSAT56G2723 Cannabis sativa HOM05D007070 ORTHO05D008892 8.6e-60 234.2 170 69.4
Psat2g122360 Pisum sativum HOM05D007070 ORTHO05D008892 8.6e-60 234.2 202 63.9
HanXRQChr08g0209191 Helianthus annuus HOM05D007070 ORTHO05D008892 1.5e-59 233.4 153 77.8
RhsimUnG0241900 Rhododendron simsii HOM05D007070 ORTHO05D008892 1.5e-59 233.4 174 69.5
Peaxi162Scf00026g00288 Petunia axillaris HOM05D007070 ORTHO05D008892 2.5e-59 232.6 197 68.0
Rhsim12G0131600 Rhododendron simsii HOM05D007070 ORTHO05D008892 4.3e-59 231.9 159 73.0
Carub.0001s1403 Capsella rubella HOM05D007070 ORTHO05D008892 5.6e-59 231.5 193 64.2
Sp1g12710 Schrenkiella parvula HOM05D007070 ORTHO05D008892 7.3e-59 231.1 190 62.1
AL1G26230 Arabidopsis lyrata HOM05D007070 ORTHO05D008892 1.6e-58 229.9 199 63.3
Thhalv10008846m.g Eutrema salsugineum HOM05D007070 ORTHO05D008892 2.8e-58 229.2 192 63.0
ClCG05G024460 Citrullus lanatus HOM05D007070 ORTHO05D008892 4.7e-58 228.4 168 70.8
CARHR014780 Cardamine hirsuta HOM05D007070 ORTHO05D008892 1.1e-57 227.3 198 61.6
Lj2g0006172 Lotus japonicus HOM05D007070 ORTHO05D008892 1.8e-57 226.5 130 83.8
ECA236G0127 Erigeron canadensis HOM05D007070 ORTHO05D008892 8.9e-57 224.2 182 67.0
C05p12140 Brassica napus HOM05D007070 ORTHO05D008892 1.2e-56 223.8 137 79.6
BolC5t29966H Brassica oleracea HOM05D007070 ORTHO05D008892 1.2e-56 223.8 137 79.6
BraA06t24215Z Brassica rapa HOM05D007070 ORTHO05D008892 1.5e-56 223.4 137 79.6
CDE05G3277 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 3.4e-56 222.2 133 79.7
BcaB02g06484 Brassica carinata HOM05D007070 ORTHO05D008892 9.9e-56 220.7 198 62.1
A06p10330 Brassica napus HOM05D007070 ORTHO05D008892 8.4e-55 217.6 198 61.6
TPR.G36542 Trifolium pratense HOM05D007070 ORTHO05D008892 7.1e-54 214.5 117 84.6
THA.LOC104805942 Tarenaya hassleriana HOM05D007070 ORTHO05D008892 1.0e-52 210.7 144 74.3
HPP92_018585 Vanilla planifolia HOM05D007070 ORTHO05D008892 1.3e-52 210.3 175 61.7
Aa31LG1G700 Aethionema arabicum HOM05D007070 ORTHO05D008892 5.1e-52 208.4 193 58.0
MSTRG.684 Avicennia marina HOM05D007070 ORTHO05D008892 5.1e-52 208.4 189 63.0
HPP92_018595 Vanilla planifolia HOM05D007070 ORTHO05D008892 2.5e-51 206.1 175 60.6
SEGI_28311 Sequoiadendron giganteum HOM05D007070 ORTHO05D008892 1.7e-47 193.4 121 75.2
Zm00001eb402240 Zea mays HOM05D007070 ORTHO05D008892 4.9e-47 191.8 113 78.8
Os03g0170500 Oryza sativa ssp. japonica HOM05D007070 ORTHO05D008892 2.4e-46 189.5 113 77.9
unitig_699.g19919 Utricularia gibba HOM05D007070 ORTHO05D008892 4.2e-46 188.7 165 60.0
AagrBONN_evm.TU.Sc2ySwM_362.2904 Anthoceros agrestis HOM05D007070 ORTHO05D008892 5.4e-46 188.3 129 65.1
BcaC05g25332 Brassica carinata HOM05D007070 ORTHO05D008892 5.4e-46 188.3 137 70.8
SMO329G0045 Selaginella moellendorffii HOM05D007070 ORTHO05D008892 1.3e-44 183.7 125 68.0
Mapoly0002s0258 Marchantia polymorpha HOM05D007070 ORTHO05D008892 1.5e-43 180.3 124 68.5
Sc04g0008340 Simmondsia chinensis HOM05D007070 ORTHO05D008892 5.3e-41 171.8 172 57.6
CBR_g47945 Chara braunii HOM05D007070 ORTHO05D008892 1.8e-36 156.8 110 63.6
AUR62028813 Chenopodium quinoa HOM05D007070 ORTHO05D008892 5.6e-35 151.8 200 49.5
Cre08.g358540 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 1.0e-23 114.4 131 38.9
MCO16G462 Micromonas commoda HOM05D007070 ORTHO05D008892 1.3e-18 97.4 163 34.4
PRCOL_00004582 Prasinoderma coloniale HOM05D007070 ORTHO05D008892 1.4e-17 94.0 117 41.9
Atru.chr2.2148 Acer truncatum HOM05D007070 ORTHO05D008892 1.3e-15 87.4 48 81.2
Cre07.g321300 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 3.8e-15 85.9 120 32.5


User provided reference genes

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