Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G1078 Trochodendron aralioides HOM05D000462 ORTHO05D005846 2.8e-117 425.2 207 100.0
Nn3g19412 Nelumbo nucifera HOM05D000462 ORTHO05D005846 1.1e-44 184.1 165 51.5
Nn3g19417 Nelumbo nucifera HOM05D000462 ORTHO05D005846 1.1e-44 184.1 165 51.5
Dinv43525 Davidia involucrata HOM05D000462 ORTHO05D005846 1.4e-44 183.7 151 58.3
Hma1.2p1_0353F.1_g133250 Hydrangea macrophylla HOM05D000462 ORTHO05D005846 2.7e-43 179.5 135 62.2
Actinidia21593 Actinidia chinensis HOM05D000462 ORTHO05D005846 1.8e-39 166.8 146 54.1
CSS0047566 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 6.8e-39 164.9 145 55.2
CSS0023532 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 1.5e-38 163.7 146 54.8
CSS0030224 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 9.8e-38 161.0 145 53.8
Nn1g09754 Nelumbo nucifera HOM05D000462 ORTHO05D005846 4.9e-37 158.7 121 61.2
MD07G1080300 Malus domestica HOM05D000462 ORTHO05D005846 6.4e-37 158.3 146 52.7
GSVIVG01019293001 Vitis vinifera HOM05D000462 ORTHO05D005846 5.4e-36 155.2 155 51.0
Cfa010675 Carpinus fangiana HOM05D000462 ORTHO05D005846 1.6e-35 153.7 145 50.3
Prupe.2G100300 Prunus persica HOM05D000462 ORTHO05D005846 1.6e-35 153.7 147 50.3
Haze_03590 Corylus avellana HOM05D000462 ORTHO05D005846 2.7e-35 152.9 147 52.4
PSO782G4146 Papaver somniferum HOM05D000462 ORTHO05D005846 7.8e-35 151.4 202 44.1
PSO063G2746 Papaver somniferum HOM05D000462 ORTHO05D005846 1.7e-34 150.2 202 45.5
Prupe.2G104700 Prunus persica HOM05D000462 ORTHO05D005846 1.7e-34 150.2 149 48.3
Rhsim07G0047200 Rhododendron simsii HOM05D000462 ORTHO05D005846 5.0e-34 148.7 149 49.7
Atru.chr2.1657 Acer truncatum HOM05D000462 ORTHO05D005846 8.6e-34 147.9 150 50.0
Aqoxy3G02219 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 8.6e-34 147.9 195 44.6
CiPaw.13G054400 Carya illinoinensis HOM05D000462 ORTHO05D005846 8.6e-34 147.9 149 50.3
MD02G1233300 Malus domestica HOM05D000462 ORTHO05D005846 3.3e-33 146.0 133 51.1
PSO017G2480 Papaver somniferum HOM05D000462 ORTHO05D005846 5.6e-33 145.2 144 52.1
RcHm_v2.0_Chr2g0147411 Rosa chinensis HOM05D000462 ORTHO05D005846 2.8e-32 142.9 139 52.5
Prupe.2G104300 Prunus persica HOM05D000462 ORTHO05D005846 3.6e-32 142.5 133 50.4
Eucgr.E01753 Eucalyptus grandis HOM05D000462 ORTHO05D005846 6.2e-32 141.7 129 55.0
FvH4_6g35582 Fragaria vesca HOM05D000462 ORTHO05D005846 8.0e-32 141.4 125 53.6
FAN14G2914 Fragaria x ananassa HOM05D000462 ORTHO05D005846 8.0e-32 141.4 125 53.6
PSO478G1321 Papaver somniferum HOM05D000462 ORTHO05D005846 8.0e-32 141.4 144 52.1
RcHm_v2.0_Chr2g0147401 Rosa chinensis HOM05D000462 ORTHO05D005846 1.1e-31 141.0 142 50.7
FAN06G2574 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.4e-31 140.6 139 51.8
MELO3C006216.2 Cucumis melo HOM05D000462 ORTHO05D005846 1.8e-31 140.2 147 47.6
CsaV3_3G009950 Cucumis sativus L. HOM05D000462 ORTHO05D005846 2.3e-31 139.8 143 48.3
Sed0002685 Sechium edule HOM05D000462 ORTHO05D005846 2.3e-31 139.8 147 47.6
FAN10G1386 Fragaria x ananassa HOM05D000462 ORTHO05D005846 4.0e-31 139.0 139 49.6
FvH4_7g07720 Fragaria vesca HOM05D000462 ORTHO05D005846 5.2e-31 138.7 139 51.1
FAN03G2319 Fragaria x ananassa HOM05D000462 ORTHO05D005846 6.8e-31 138.3 151 47.0
Rhsim07G0047100 Rhododendron simsii HOM05D000462 ORTHO05D005846 6.8e-31 138.3 149 47.7
Aqoxy7G00268 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 8.9e-31 137.9 186 43.5
ClCG05G002510 Citrullus lanatus HOM05D000462 ORTHO05D005846 8.9e-31 137.9 147 47.6
Sed0009318 Sechium edule HOM05D000462 ORTHO05D005846 1.5e-30 137.1 147 44.9
RcHm_v2.0_Chr1g0342371 Rosa chinensis HOM05D000462 ORTHO05D005846 2.0e-30 136.7 133 54.1
Peaxi162Scf00907g00221 Petunia axillaris HOM05D000462 ORTHO05D005846 5.8e-30 135.2 161 46.6
FvH4_6g35581 Fragaria vesca HOM05D000462 ORTHO05D005846 2.2e-29 133.3 141 47.5
MSTRG.17069 Avicennia marina HOM05D000462 ORTHO05D005846 3.7e-29 132.5 149 44.3
Aqoxy3G00515 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 4.9e-29 132.1 164 45.7
Aqoxy2G03796 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 5.4e-28 128.6 121 55.4
PGR042G2077 Punica granatum HOM05D000462 ORTHO05D005846 5.4e-28 128.6 124 48.4
PGSC0003DMG400042622 Solanum tuberosum HOM05D000462 ORTHO05D005846 5.4e-28 128.6 133 52.6
Cc08_g05580 Coffea canephora HOM05D000462 ORTHO05D005846 7.0e-28 128.3 129 51.9
ClCG05G011530 Citrullus lanatus HOM05D000462 ORTHO05D005846 9.2e-28 127.9 128 48.4
Nitab4.5_0000792g0060 Nicotiana tabacum HOM05D000462 ORTHO05D005846 9.2e-28 127.9 146 47.3
Sc02g0004850 Simmondsia chinensis HOM05D000462 ORTHO05D005846 9.2e-28 127.9 107 56.1
Solyc01g081400.3 Solanum lycopersicum HOM05D000462 ORTHO05D005846 1.2e-27 127.5 143 49.0
Sopen01g032970 Solanum pennellii HOM05D000462 ORTHO05D005846 1.2e-27 127.5 143 49.0
Nitab4.5_0003123g0040 Nicotiana tabacum HOM05D000462 ORTHO05D011162 3.5e-27 125.9 127 48.8
Phvul.002G100800 Phaseolus vulgaris HOM05D000462 ORTHO05D005846 4.6e-27 125.6 151 42.4
CAN.G992.17 Capsicum annuum HOM05D000462 ORTHO05D005846 6.0e-27 125.2 140 46.4
DCAR_029565 Daucus carota HOM05D000462 ORTHO05D005846 6.0e-27 125.2 132 50.8
RcHm_v2.0_Chr1g0342401 Rosa chinensis HOM05D000462 ORTHO05D005846 1.0e-26 124.4 128 48.4
Zm00001eb421100 Zea mays HOM05D000462 ORTHO05D005846 6.6e-26 121.7 127 42.5
Peaxi162Scf00907g00226 Petunia axillaris HOM05D000462 ORTHO05D005846 1.5e-25 120.6 124 47.6
PGSC0003DMG400001798 Solanum tuberosum HOM05D000462 ORTHO05D005846 1.9e-25 120.2 143 46.9
PGSC0003DMG400020979 Solanum tuberosum HOM05D000462 ORTHO05D005846 1.9e-25 120.2 143 46.9
VMungo0251G1006 Vigna mungo HOM05D000462 ORTHO05D005846 1.9e-25 120.2 144 42.4
Os04g0386900 Oryza sativa ssp. japonica HOM05D000462 ORTHO05D005846 3.3e-25 119.4 130 43.8
RcHm_v2.0_Chr1g0342491 Rosa chinensis HOM05D000462 ORTHO05D005846 3.3e-25 119.4 125 48.0
Sopen01g026530 Solanum pennellii HOM05D000462 ORTHO05D005846 3.3e-25 119.4 135 45.2
vmacro13593 Vaccinium macrocarpon HOM05D000462 ORTHO05D005846 4.3e-25 119.0 135 50.4
EL10Ac4g07923 Beta vulgaris HOM05D000462 ORTHO05D005846 7.3e-25 118.2 133 48.1
EL10Ac4g07924 Beta vulgaris HOM05D000462 ORTHO05D005846 7.3e-25 118.2 148 43.9
Hund26858 Selenicereus undatus HOM05D000462 ORTHO05D005846 9.5e-25 117.9 139 46.8
CAN.G206.135 Capsicum annuum HOM05D000462 ORTHO05D005846 1.2e-24 117.5 136 45.6
Lsat_1_v5_gn_5_59060 Lactuca sativa HOM05D000462 ORTHO05D005846 4.7e-24 115.5 154 39.6
Cc00_g12640 Coffea canephora HOM05D000462 ORTHO05D005846 6.2e-24 115.2 130 42.3
AUR62020515 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.4e-23 114.0 158 38.0
AUR62031622 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.4e-23 114.0 133 42.1
Migut.N01672 Erythranthe guttata HOM05D000462 ORTHO05D005846 2.3e-23 113.2 131 45.0
DCAR_029566 Daucus carota HOM05D000462 ORTHO05D005846 4.0e-23 112.5 129 45.0
arahy.Tifrunner.gnm1.ann1.XCU387 Arachis hypogaea HOM05D000462 ORTHO05D005846 5.2e-23 112.1 125 44.8
DCAR_029563 Daucus carota HOM05D000462 ORTHO05D005846 5.2e-23 112.1 125 44.0
Migut.N01673 Erythranthe guttata HOM05D000462 ORTHO05D005846 1.5e-22 110.5 164 39.0
arahy.Tifrunner.gnm1.ann1.ES60GW Arachis hypogaea HOM05D000462 ORTHO05D005846 3.4e-22 109.4 125 44.8
Solyc01g150140.1 Solanum lycopersicum HOM05D000462 ORTHO05D005846 3.4e-22 109.4 125 44.8
HPP92_014959 Vanilla planifolia HOM05D000462 ORTHO05D005846 9.9e-22 107.8 164 40.9
Cc08_g05560 Coffea canephora HOM05D000462 ORTHO05D005846 1.7e-21 107.1 124 46.8
ECA240G2690 Erigeron canadensis HOM05D000462 ORTHO05D005846 2.9e-21 106.3 156 39.1
Migut.N01674 Erythranthe guttata HOM05D000462 ORTHO05D005846 2.9e-21 106.3 140 40.7
Lsat_1_v5_gn_7_33120 Lactuca sativa HOM05D000462 ORTHO05D005846 4.9e-21 105.5 128 43.8
Cc08_g05570 Coffea canephora HOM05D000462 ORTHO05D005846 1.4e-20 104.0 125 45.6
arahy.Tifrunner.gnm1.ann1.L6NMZX Arachis hypogaea HOM05D000462 ORTHO05D005846 1.9e-20 103.6 148 41.9
RcHm_v2.0_Chr1g0342511 Rosa chinensis HOM05D000462 ORTHO05D005846 2.4e-20 103.2 102 50.0
arahy.Tifrunner.gnm1.ann1.AX2FME Arachis hypogaea HOM05D000462 ORTHO05D005846 9.2e-20 101.3 147 40.8
HanXRQChr13g0411631 Helianthus annuus HOM05D000462 ORTHO05D005846 9.2e-20 101.3 155 36.1
Peaxi162Scf00245g00411 Petunia axillaris HOM05D000462 ORTHO05D005846 9.2e-20 101.3 130 44.6
Oeu013594.1 Olea europaea HOM05D000462 ORTHO05D005846 1.2e-19 100.9 114 43.9
Oeu039097.1 Olea europaea HOM05D000462 ORTHO05D005846 1.6e-19 100.5 120 43.3
Medtr4g083390 Medicago truncatula HOM05D000462 ORTHO05D005846 2.1e-19 100.1 133 42.1
SalBow4G1864 Salvia bowleyana HOM05D000462 ORTHO05D005846 2.1e-19 100.1 131 43.5
SalBow4G3150 Salvia bowleyana HOM05D000462 ORTHO05D005846 2.1e-19 100.1 131 43.5
Lalb_Chr09g0328911 Lupinus albus HOM05D000462 ORTHO05D005846 3.5e-19 99.4 121 43.0
TPR.G34026 Trifolium pratense HOM05D000462 ORTHO05D005846 3.5e-19 99.4 118 44.1
ECA236G1772 Erigeron canadensis HOM05D000462 ORTHO05D005846 7.8e-19 98.2 148 40.5
Ciclev10033936m.g Citrus clementina HOM05D000462 ORTHO05D005846 1.0e-18 97.8 100 45.0
FAN06G0093 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.7e-18 97.1 96 52.1
Psat7g132920 Pisum sativum HOM05D000462 ORTHO05D005846 3.0e-18 96.3 120 44.2
CANSAT78G2521 Cannabis sativa HOM05D000462 ORTHO05D005846 1.1e-17 94.4 108 47.2
Nitab4.5_0006461g0020 Nicotiana tabacum HOM05D000462 ORTHO05D005846 1.1e-17 94.4 96 50.0
unitig_749.g14241 Utricularia gibba HOM05D000462 ORTHO05D005846 1.1e-17 94.4 141 36.2
AUR62020518 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.9e-17 93.6 148 37.8
AUR62015689 Chenopodium quinoa HOM05D000462 ORTHO05D005846 3.3e-17 92.8 121 40.5
AUR62015684 Chenopodium quinoa HOM05D000462 ORTHO05D005846 4.3e-17 92.4 148 37.8
arahy.Tifrunner.gnm1.ann1.62DZ2D Arachis hypogaea HOM05D000462 ORTHO05D005846 9.5e-17 91.3 126 41.3
Nitab4.5_0000050g0130 Nicotiana tabacum HOM05D000462 ORTHO05D005846 9.5e-17 91.3 128 38.3
CDE03G0429 Ceratophyllum demersum HOM05D000462 ORTHO05D005846 1.2e-16 90.9 89 48.3
AUR62031619 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.6e-16 90.5 90 47.8
unitig_26.g8840 Utricularia gibba HOM05D000462 ORTHO05D005846 6.2e-16 88.6 123 38.2
SalBow4G0191 Salvia bowleyana HOM05D009568 ORTHO05D011026 1.1e-15 87.8 105 43.8
FAN14G3081 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.4e-15 87.4 98 44.9
Solyc07g017470.3 Solanum lycopersicum HOM05D000462 ORTHO05D005846 3.1e-15 86.3 97 44.3
unitig_750.g28427 Utricularia gibba HOM05D000462 ORTHO05D005846 4.0e-15 85.9 181 35.4
Glyma.07G224100 Glycine max HOM05D000462 ORTHO05D005846 5.2e-15 85.5 84 48.8
AUR62031621 Chenopodium quinoa HOM05D000462 ORTHO05D005846 8.9e-15 84.7 104 41.3
SalBow4G0706 Salvia bowleyana HOM05D009568 ORTHO05D011026 8.9e-15 84.7 105 42.9
CAN.G992.16 Capsicum annuum HOM05D000462 ORTHO05D005846 1.2e-14 84.3 98 49.0
Os06g0112300 Oryza sativa ssp. japonica HOM05D000462 ORTHO05D005846 1.5e-14 84.0 124 37.1
Cpa.g.sc73.65 Carica papaya HOM05D000462 ORTHO05D005846 2.0e-14 83.6 93 40.9
HanXRQChr01g0021801 Helianthus annuus HOM05D000462 ORTHO05D005846 3.4e-14 82.8 103 39.8
SalBow4G2124 Salvia bowleyana HOM05D000462 ORTHO05D005846 5.8e-14 82.0 173 35.3
Ca_18787_v3 Cicer arietinum L. HOM05D000462 ORTHO05D005846 9.9e-14 81.3 78 53.8
SGA_v2.0_scaffold4G02224 Striga asiatica HOM05D000462 ORTHO05D005846 1.7e-13 80.5 153 30.7
SalBow4G2827 Salvia bowleyana HOM05D000462 ORTHO05D005846 2.9e-13 79.7 173 34.7
SGA_v2.0_scaffold98G29378 Striga asiatica HOM05D000462 ORTHO05D005846 4.2e-12 75.9 138 34.1
Cpa.g.c42681 Carica papaya HOM05D000462 ORTHO05D005846 2.7e-11 73.2 70 45.7
Aqoxy5G02385 Aquilegia oxysepala HOM05D024176 ORTHO05D005846 3.0e-10 69.7 120 40.0
Peaxi162Scf00104g00047 Petunia axillaris HOM05D000462 ORTHO05D005846 3.0e-10 69.7 106 36.8
FvH4_7g07710 Fragaria vesca HOM05D000462 ORTHO05D005846 6.6e-10 68.6 120 36.7
Peaxi162Scf01016g00003 Petunia axillaris HOM05D000462 ORTHO05D005846 1.9e-09 67.0 99 35.4
SEGI_02922 Sequoiadendron giganteum HOM05D000823 ORTHO05D005846 9.6e-09 64.7 129 31.8
Nitab4.5_0002937g0010 Nicotiana tabacum HOM05D010896 ORTHO05D011162 3.6e-08 62.8 95 35.8
SalBow6G3582 Salvia bowleyana HOM05D000462 ORTHO05D005846 6.2e-08 62.0 99 31.3
FAN10G1699 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.4e-07 60.8 79 41.8
QL11p039132 Quercus lobata HOM05D000823 ORTHO05D000088 1.8e-07 60.5 82 34.1
TPR.G34039 Trifolium pratense HOM05D000462 ORTHO05D005846 1.8e-07 60.5 108 32.4
AUR62020516 Chenopodium quinoa HOM05D000462 ORTHO05D005846 4.0e-07 59.3 67 43.3
Nitab4.5_0003145g0040 Nicotiana tabacum HOM05D008575 ORTHO05D011162 4.0e-07 59.3 121 33.1
Glyma.20G024000 Glycine max HOM05D000462 ORTHO05D005846 6.9e-07 58.5 66 40.9
Nitab4.5_0004193g0050 Nicotiana tabacum HOM05D008575 ORTHO05D011162 6.9e-07 58.5 95 34.7
Nitab4.5_0013716g0010 Nicotiana tabacum HOM05D008575 ORTHO05D011162 6.9e-07 58.5 92 37.0
COL.COLO4_21442 Corchorus olitorius HOM05D012915 ORTHO05D012666 1.5e-06 57.4 85 32.9
Nitab4.5_0003980g0050 Nicotiana tabacum HOM05D008575 ORTHO05D011162 1.5e-06 57.4 95 32.6
Nitab4.5_0006917g0020 Nicotiana tabacum HOM05D010896 ORTHO05D011162 1.5e-06 57.4 94 33.0
ClCG02G013120 Citrullus lanatus HOM05D000395 ORTHO05D000088 2.6e-06 56.6 100 33.0
Peaxi162Scf00016g01343 Petunia axillaris HOM05D000823 ORTHO05D000088 2.6e-06 56.6 108 29.6
COL.COLO4_05305 Corchorus olitorius HOM05D012915 ORTHO05D012666 4.4e-06 55.8 85 32.9
Duzib248G0282 Durio zibethinus HOM05D000823 ORTHO05D009132 5.8e-06 55.5 151 29.1
FAN26G1384 Fragaria x ananassa HOM05D000395 ORTHO05D000088 9.9e-06 54.7 93 35.5
FAN26G3456 Fragaria x ananassa HOM05D000395 ORTHO05D000088 9.9e-06 54.7 91 33.0
Nitab4.5_0000216g0220 Nicotiana tabacum HOM05D010896 ORTHO05D011162 9.9e-06 54.7 78 43.6
Nitab4.5_0006031g0060 Nicotiana tabacum HOM05D010896 ORTHO05D011162 9.9e-06 54.7 80 35.0


User provided reference genes

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