Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G1025 Trochodendron aralioides HOM05D000008 ORTHO05D000005 7.8e-95 350.5 186 100.0
TAR374G0245 Trochodendron aralioides HOM05D000008 ORTHO05D000005 1.0e-73 280.4 177 76.8
TAR374G1535 Trochodendron aralioides HOM05D000008 ORTHO05D000005 3.2e-72 275.4 175 75.4
TAR622G0853 Trochodendron aralioides HOM05D000008 ORTHO05D000005 1.0e-41 174.1 175 51.4
TAR622G0011 Trochodendron aralioides HOM05D000008 ORTHO05D000005 2.0e-37 159.8 179 48.6
TAR622G0536 Trochodendron aralioides HOM05D004164 ORTHO05D000005 6.5e-33 144.8 169 49.1
Dinv15856 Davidia involucrata HOM05D000008 ORTHO05D000005 2.0e-21 106.7 178 35.4
GSVIVG01030822001 Vitis vinifera HOM05D000008 ORTHO05D000005 4.1e-19 99.0 177 34.5
GSVIVG01030819001 Vitis vinifera HOM05D000008 ORTHO05D000005 7.0e-19 98.2 178 33.7
GSVIVG01030829001 Vitis vinifera HOM05D000008 ORTHO05D000005 1.1e-16 90.9 177 33.9
Nn1g08566 Nelumbo nucifera HOM05D000008 ORTHO05D000005 3.6e-15 85.9 186 34.4
Nn1g08575 Nelumbo nucifera HOM05D000008 ORTHO05D000005 1.0e-14 84.3 186 33.9
Nn1g08565 Nelumbo nucifera HOM05D000008 ORTHO05D000005 3.4e-13 79.3 186 32.3
Rhsim08G0087400 Rhododendron simsii HOM05D000008 ORTHO05D000005 5.8e-13 78.6 182 31.3
Potri.017G125800 Populus trichocarpa HOM05D000008 ORTHO05D000005 7.5e-13 78.2 196 33.2
Sabra17G0105700 Salix brachista HOM05D000008 ORTHO05D000005 4.9e-12 75.5 193 33.7
Nn1g08576 Nelumbo nucifera HOM05D000008 ORTHO05D000005 8.3e-12 74.7 183 32.8
Haze_14226 Corylus avellana HOM05D000008 ORTHO05D000005 1.1e-11 74.3 186 28.5
Rhsim08G0087500 Rhododendron simsii HOM05D000008 ORTHO05D000005 2.4e-11 73.2 179 30.2
Rhsim10G0209900 Rhododendron simsii HOM05D000008 ORTHO05D000005 3.2e-11 72.8 179 30.2
Haze_13996 Corylus avellana HOM05D000008 ORTHO05D000005 5.4e-11 72.0 185 28.6
Prupe.3G163100 Prunus persica HOM05D000008 ORTHO05D000005 5.4e-11 72.0 176 30.1
Dinv14892 Davidia involucrata HOM05D000008 ORTHO05D000005 9.2e-11 71.2 186 32.8
QL02p057135 Quercus lobata HOM05D000008 ORTHO05D000005 9.2e-11 71.2 178 29.8
QL02p057371 Quercus lobata HOM05D000008 ORTHO05D000005 2.0e-10 70.1 178 29.2
QL02p057624 Quercus lobata HOM05D000008 ORTHO05D000005 2.0e-10 70.1 178 29.2
Dinv14889 Davidia involucrata HOM05D000008 ORTHO05D000005 2.7e-10 69.7 159 34.0
Potri.017G125600 Populus trichocarpa HOM05D000008 ORTHO05D000005 2.7e-10 69.7 198 29.3
QL02p056840 Quercus lobata HOM05D000008 ORTHO05D000005 1.0e-09 67.8 178 28.7
Haze_13994 Corylus avellana HOM05D000008 ORTHO05D000005 1.3e-09 67.4 156 29.5
Rhsim08G0087800 Rhododendron simsii HOM05D000008 ORTHO05D000005 1.7e-09 67.0 186 28.5
Potri.017G125700 Populus trichocarpa HOM05D000008 ORTHO05D000005 5.0e-09 65.5 189 29.6
PGSC0003DMG400013966 Solanum tuberosum HOM05D000008 ORTHO05D000005 8.6e-09 64.7 192 31.2
Lj2A433T13 Lonicera japonica HOM05D000008 ORTHO05D000005 1.9e-08 63.5 183 28.4
Dinv14890 Davidia involucrata HOM05D000008 ORTHO05D000005 2.5e-08 63.2 158 32.9
Oeu030815.1 Olea europaea HOM05D000008 ORTHO05D000005 2.5e-08 63.2 182 28.0
Rhsim08G0087200 Rhododendron simsii HOM05D000008 ORTHO05D000005 3.3e-08 62.8 185 29.2
Solyc10g086250.2 Solanum lycopersicum HOM05D000008 ORTHO05D000005 3.3e-08 62.8 192 31.8
Sopen10g035640 Solanum pennellii HOM05D000008 ORTHO05D000005 3.3e-08 62.8 192 28.6
Sopen10g035660 Solanum pennellii HOM05D000008 ORTHO05D000005 4.3e-08 62.4 184 27.2
Rhsim08G0087300 Rhododendron simsii HOM05D000008 ORTHO05D000005 7.3e-08 61.6 185 28.6
Actinidia16385 Actinidia chinensis HOM05D000008 ORTHO05D000005 1.2e-07 60.8 185 27.6
CAN.G501.4 Capsicum annuum HOM05D000008 ORTHO05D000005 2.1e-07 60.1 194 28.4
Potri.017G126000 Populus trichocarpa HOM05D000008 ORTHO05D011663 3.6e-07 59.3 191 30.9
Atru.chr1.1852 Acer truncatum HOM05D000008 ORTHO05D000005 1.1e-06 57.8 198 27.3
Nn4g24224 Nelumbo nucifera HOM05D000008 ORTHO05D000005 1.4e-06 57.4 211 28.4
Oeu041966.1 Olea europaea HOM05D000008 ORTHO05D000005 1.4e-06 57.4 126 33.3
CSS0046378 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D000005 2.3e-06 56.6 187 28.9
Haze_14240 Corylus avellana HOM05D000008 ORTHO05D000005 2.3e-06 56.6 174 27.6
MD09G1278600 Malus domestica HOM05D000008 ORTHO05D000005 2.3e-06 56.6 180 26.7
Oeu050994.1 Olea europaea HOM05D000008 ORTHO05D000005 3.1e-06 56.2 151 31.1
Nn120s43474 Nelumbo nucifera HOM05D000008 ORTHO05D000005 4.0e-06 55.8 147 32.0
Prupe.6G175900 Prunus persica HOM05D000008 ORTHO05D000005 4.0e-06 55.8 165 27.3
Rhsim10G0210000 Rhododendron simsii HOM05D000008 ORTHO05D000005 4.0e-06 55.8 121 33.1
CiPaw.03G070400 Carya illinoinensis HOM05D000008 ORTHO05D000005 6.8e-06 55.1 194 27.8
Oeu050989.1 Olea europaea HOM05D000008 ORTHO05D000005 6.8e-06 55.1 151 31.1
PGR042G2550 Punica granatum HOM05D000008 ORTHO05D000005 6.8e-06 55.1 181 28.7


User provided reference genes

Program Settings