Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0905 Trochodendron aralioides HOM05D003611 ORTHO05D004281 3.4e-129 464.9 220 100.0
TAR375G0370 Trochodendron aralioides HOM05D003611 ORTHO05D004281 5.1e-69 265.0 202 67.8
Nn1g01656 Nelumbo nucifera HOM05D003611 ORTHO05D004281 1.7e-64 250.0 205 63.9
Dinv43856 Davidia involucrata HOM05D003611 ORTHO05D004281 1.8e-61 240.0 206 60.2
Thecc.01G353800 Theobroma cacao HOM05D003611 ORTHO05D004281 8.5e-56 221.1 208 57.2
QL04p055101 Quercus lobata HOM05D003611 ORTHO05D004281 4.7e-54 215.3 215 54.0
CiPaw.01G065700 Carya illinoinensis HOM05D003611 ORTHO05D004281 6.1e-54 214.9 216 54.2
Prupe.2G176000 Prunus persica HOM05D003611 ORTHO05D004281 8.8e-53 211.1 215 52.6
COL.COLO4_12765 Corchorus olitorius HOM05D003611 ORTHO05D004281 2.8e-51 206.1 208 53.8
Cfa003881 Carpinus fangiana HOM05D003611 ORTHO05D004281 4.8e-51 205.3 214 52.3
CiPaw.02G033900 Carya illinoinensis HOM05D003611 ORTHO05D004281 9.1e-50 201.1 215 51.6
Cpa.g.sc184.26 Carica papaya HOM05D003611 ORTHO05D004281 2.2e-48 196.4 206 53.9
Aqoxy7G00231 Aquilegia oxysepala HOM05D003611 ORTHO05D004281 1.5e-47 193.7 200 52.0
Manes.05G030300 Manihot esculenta HOM05D003611 ORTHO05D004281 1.5e-47 193.7 203 51.7
Gorai.007G102800 Gossypium raimondii HOM05D003611 ORTHO05D004281 9.4e-47 191.0 211 52.1
Actinidia02822 Actinidia chinensis HOM05D003611 ORTHO05D004281 1.2e-46 190.7 199 49.7
CSS0038908 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 2.7e-46 189.5 208 51.4
Atru.chr5.552 Acer truncatum HOM05D003611 ORTHO05D004281 1.8e-45 186.8 203 51.2
CSS0009973 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 3.0e-45 186.0 208 51.0
Duzib133G0517 Durio zibethinus HOM05D003611 ORTHO05D004281 3.0e-45 186.0 210 51.4
PSO478G2290 Papaver somniferum HOM05D003611 ORTHO05D004281 3.0e-45 186.0 207 52.2
TWI59G0398 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 3.0e-45 186.0 205 49.8
Gohir.D11G096500 Gossypium hirsutum HOM05D003611 ORTHO05D004281 5.2e-45 185.3 211 51.7
RcHm_v2.0_Chr1g0357311 Rosa chinensis HOM05D003611 ORTHO05D004281 5.2e-45 185.3 218 49.1
FAN03G1353 Fragaria x ananassa HOM05D003611 ORTHO05D004281 6.7e-45 184.9 219 49.3
Gohir.A11G091700 Gossypium hirsutum HOM05D003611 ORTHO05D004281 1.5e-44 183.7 211 51.2
FAN10G1370 Fragaria x ananassa HOM05D003611 ORTHO05D004281 4.4e-44 182.2 218 48.2
Ciclev10018621m.g Citrus clementina HOM05D003611 ORTHO05D004281 7.5e-44 181.4 205 49.3
FAN10G4104 Fragaria x ananassa HOM05D003611 ORTHO05D004281 7.5e-44 181.4 218 47.7
Gohir.A11G091600 Gossypium hirsutum HOM05D003611 ORTHO05D004281 9.7e-44 181.0 211 49.8
Sabra02G0147500 Salix brachista HOM05D003611 ORTHO05D004281 2.2e-43 179.9 203 50.7
Manes.01G253100 Manihot esculenta HOM05D003611 ORTHO05D004281 2.8e-43 179.5 201 47.8
FvH4_7g15120 Fragaria vesca HOM05D003611 ORTHO05D004281 3.7e-43 179.1 218 47.7
FAN06G0771 Fragaria x ananassa HOM05D003611 ORTHO05D004281 3.7e-43 179.1 218 47.7
FAN06G4234 Fragaria x ananassa HOM05D003611 ORTHO05D004281 3.7e-43 179.1 218 47.7
Potri.002G163000 Populus trichocarpa HOM05D003611 ORTHO05D004281 8.2e-43 177.9 204 50.5
AUR62022609 Chenopodium quinoa HOM05D003611 ORTHO05D004281 1.1e-42 177.6 207 48.8
MD07G1132600 Malus domestica HOM05D003611 ORTHO05D004281 1.8e-42 176.8 215 47.0
Gohir.D11G096300 Gossypium hirsutum HOM05D003611 ORTHO05D004281 2.4e-42 176.4 211 48.8
PSO782G0890 Papaver somniferum HOM05D003611 ORTHO05D004281 2.4e-42 176.4 208 51.9
FAN01G0094 Fragaria x ananassa HOM05D003611 ORTHO05D004281 3.1e-42 176.0 218 46.3
Glyma.09G255400 Glycine max HOM05D003611 ORTHO05D004281 5.3e-42 175.3 212 51.4
TWI14G0836 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 5.3e-42 175.3 203 47.8
Ca_00818_v3 Cicer arietinum L. HOM05D003611 ORTHO05D004281 7.0e-42 174.9 206 49.5
AUR62004403 Chenopodium quinoa HOM05D003611 ORTHO05D004281 1.2e-41 174.1 207 47.8
Phvul.008G059100 Phaseolus vulgaris HOM05D003611 ORTHO05D004281 1.2e-41 174.1 208 50.0
Rhsim07G0011300 Rhododendron simsii HOM05D003611 ORTHO05D004281 1.2e-41 174.1 208 49.0
Gorai.007G102600 Gossypium raimondii HOM05D003611 ORTHO05D004281 3.5e-41 172.6 228 44.3
Cc02_g38450 Coffea canephora HOM05D003611 ORTHO05D004281 4.5e-41 172.2 209 48.8
Glyma.18G237600 Glycine max HOM05D003611 ORTHO05D004281 4.5e-41 172.2 209 50.2
MD01G1069900 Malus domestica HOM05D003611 ORTHO05D004281 5.9e-41 171.8 215 46.5
TWI23G0144 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 1.3e-40 170.6 206 48.5
DCAR_008631 Daucus carota HOM05D003611 ORTHO05D004281 2.2e-40 169.9 204 46.6
Eucgr.E00101 Eucalyptus grandis HOM05D003611 ORTHO05D004281 2.2e-40 169.9 209 45.9
Sabra14G0064800 Salix brachista HOM05D003611 ORTHO05D004281 2.2e-40 169.9 200 50.0
VMungo1383G2804 Vigna mungo HOM05D003611 ORTHO05D004281 2.2e-40 169.9 208 50.0
Lj1g0014988 Lotus japonicus HOM05D003611 ORTHO05D004281 3.2e-39 166.0 210 47.6
Potri.014G089200 Populus trichocarpa HOM05D003611 ORTHO05D004281 5.5e-39 165.2 205 48.8
Hma1.2p1_0627F.1_g191700 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 2.7e-38 162.9 216 44.9
Sopen01g038800 Solanum pennellii HOM05D003611 ORTHO05D004281 2.7e-38 162.9 208 47.6
Actinidia18539 Actinidia chinensis HOM05D003611 ORTHO05D004281 4.7e-38 162.2 202 47.0
Lj7A508G38 Lonicera japonica HOM05D003611 ORTHO05D004281 6.1e-38 161.8 209 48.8
Solyc01g095020.3 Solanum lycopersicum HOM05D003611 ORTHO05D004281 8.0e-38 161.4 201 48.3
EL10Ac1g00365 Beta vulgaris HOM05D003611 ORTHO05D004281 4.0e-37 159.1 207 46.9
Ah.05g180230 Amaranthus hybridus HOM05D003611 ORTHO05D007544 1.2e-36 157.5 206 47.6
Haze_15553 Corylus avellana HOM05D003611 ORTHO05D004281 3.4e-36 156.0 162 51.9
arahy.Tifrunner.gnm1.ann1.9C73IW Arachis hypogaea HOM05D003611 ORTHO05D004281 7.5e-36 154.8 206 47.6
Nitab4.5_0010703g0040 Nicotiana tabacum HOM05D003611 ORTHO05D004281 1.7e-35 153.7 204 47.1
Hund16671 Selenicereus undatus HOM05D003611 ORTHO05D004281 1.7e-35 153.7 203 47.3
DCAR_006945 Daucus carota HOM05D003611 ORTHO05D004281 2.2e-35 153.3 202 46.5
Nitab4.5_0000915g0210 Nicotiana tabacum HOM05D003611 ORTHO05D004281 4.8e-35 152.1 201 46.8
MBI11_g13553_MAGBIO Magnolia biondii HOM05D003611 ORTHO05D004281 3.1e-34 149.4 204 51.0
arahy.Tifrunner.gnm1.ann1.I9FVBP Arachis hypogaea HOM05D003611 ORTHO05D004281 4.1e-34 149.1 206 47.1
Peaxi162Scf00020g01228 Petunia axillaris HOM05D003611 ORTHO05D004281 9.1e-34 147.9 201 46.8
CANSAT56G4470 Cannabis sativa HOM05D003611 ORTHO05D004281 2.0e-33 146.7 217 47.0
Psat3g107120 Pisum sativum HOM05D003611 ORTHO05D004281 8.5e-32 141.4 207 44.0
Lalb_Chr10g0096711 Lupinus albus HOM05D003611 ORTHO05D004281 2.5e-31 139.8 185 44.3
Peaxi162Scf00585g00319 Petunia axillaris HOM05D003611 ORTHO05D004281 2.5e-31 139.8 207 44.4
vmacro13239 Vaccinium macrocarpon HOM05D003611 ORTHO05D004281 5.5e-31 138.7 223 41.3
Lalb_Chr17g0339111 Lupinus albus HOM05D003611 ORTHO05D004281 7.2e-31 138.3 184 43.5
Sc01g0003270 Simmondsia chinensis HOM05D003611 ORTHO05D004281 9.5e-31 137.9 202 42.6
MSTRG.4840 Avicennia marina HOM05D003611 ORTHO05D004281 2.1e-30 136.7 202 42.6
Duzib268G1133 Durio zibethinus HOM05D003611 ORTHO05D004281 1.0e-29 134.4 144 48.6
Nitab4.5_0000690g0050 Nicotiana tabacum HOM05D003611 ORTHO05D004281 1.0e-29 134.4 208 43.3
Hund27250 Selenicereus undatus HOM05D003611 ORTHO05D004281 1.0e-29 134.4 200 42.0
Sc23g0002620 Simmondsia chinensis HOM05D003611 ORTHO05D004281 1.4e-29 134.0 193 40.9
Migut.B01791 Erythranthe guttata HOM05D003611 ORTHO05D004281 5.2e-29 132.1 203 42.4
GSVIVG01026955001 Vitis vinifera HOM05D003611 ORTHO05D004281 3.4e-28 129.4 185 43.2
PGR042G1491 Punica granatum HOM05D003611 ORTHO05D004281 4.4e-28 129.0 212 45.3
MSTRG.20858 Avicennia marina HOM05D003611 ORTHO05D004281 5.7e-28 128.6 206 40.8
Lalb_Chr04g0259231 Lupinus albus HOM05D003611 ORTHO05D004281 5.7e-28 128.6 182 42.9
Nitab4.5_0000200g0170 Nicotiana tabacum HOM05D003611 ORTHO05D004281 7.5e-28 128.3 207 41.5
Oeu018963.2 Olea europaea HOM05D003611 ORTHO05D004281 7.5e-28 128.3 210 40.5
Medtr7g078820 Medicago truncatula HOM05D003611 ORTHO05D004281 9.8e-28 127.9 207 41.1
Sed0010511 Sechium edule HOM05D003611 ORTHO05D004281 2.8e-27 126.3 221 38.0
Sopen10g005780 Solanum pennellii HOM05D003611 ORTHO05D004281 2.8e-27 126.3 203 42.9
Actinidia20152 Actinidia chinensis HOM05D003611 ORTHO05D004281 6.3e-27 125.2 117 53.0
Solyc10g012030.4 Solanum lycopersicum HOM05D003611 ORTHO05D004281 1.4e-26 124.0 203 41.9
ECA234G2210 Erigeron canadensis HOM05D003611 ORTHO05D004281 2.4e-26 123.2 195 44.1
AT4G01290 Arabidopsis thaliana HOM05D003611 ORTHO05D004281 4.1e-26 122.5 212 39.2
MELO3C006087.2 Cucumis melo HOM05D003611 ORTHO05D004281 2.0e-25 120.2 221 38.0
TPR.G22300 Trifolium pratense HOM05D003611 ORTHO05D004281 4.5e-25 119.0 207 39.1
ClCG05G001310 Citrullus lanatus HOM05D003611 ORTHO05D004281 1.0e-24 117.9 221 37.6
SalBow3G3040 Salvia bowleyana HOM05D003611 ORTHO05D004281 2.9e-24 116.3 210 38.6
Hma1.2p1_0623F.1_g191005 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 3.8e-24 115.9 140 51.4
Lalb_Chr04g0259241 Lupinus albus HOM05D003611 ORTHO05D004281 5.0e-24 115.5 186 41.9
AL6G52100 Arabidopsis lyrata HOM05D003611 ORTHO05D004281 4.3e-23 112.5 213 36.2
CsaV3_3G008680 Cucumis sativus L. HOM05D003611 ORTHO05D004281 7.3e-23 111.7 221 37.6
Aa31LG5G740 Aethionema arabicum HOM05D003611 ORTHO05D007544 1.6e-22 110.5 202 37.6
Oeu015220.3 Olea europaea HOM05D003611 ORTHO05D004281 2.8e-22 109.8 155 41.9
Carub.0006s3636 Capsella rubella HOM05D003611 ORTHO05D004281 4.7e-22 109.0 214 37.9
Sp6g00840 Schrenkiella parvula HOM05D003611 ORTHO05D004281 1.0e-21 107.8 220 37.3
THA.LOC104801395 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 1.4e-21 107.5 213 37.6
Dinv32513 Davidia involucrata HOM05D003611 ORTHO05D004281 4.0e-21 105.9 79 64.6
Os06g0105900 Oryza sativa ssp. japonica HOM05D003611 ORTHO05D004281 4.0e-21 105.9 160 42.5
BcaB01g02283 Brassica carinata HOM05D003611 ORTHO05D004281 1.2e-20 104.4 212 37.7
Zm00001eb374330 Zea mays HOM05D003611 ORTHO05D004281 2.0e-20 103.6 187 42.2
HanXRQChr17g0562341 Helianthus annuus HOM05D003611 ORTHO05D004281 4.4e-20 102.4 187 39.6
Duzib138G0252 Durio zibethinus HOM05D003611 ORTHO05D004281 1.3e-19 100.9 124 49.2
THA.LOC104825859 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 2.9e-19 99.8 208 34.1
Thhalv10028394m.g Eutrema salsugineum HOM05D003611 ORTHO05D004281 6.4e-19 98.6 212 35.8
THA.LOC104817035 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 1.4e-18 97.4 158 41.1
Sed0009698 Sechium edule HOM05D003611 ORTHO05D004281 3.2e-18 96.3 193 35.2
BcaC01g06854 Brassica carinata HOM05D003611 ORTHO05D004281 4.1e-18 95.9 191 37.7
BolC3t16170H Brassica oleracea HOM05D003611 ORTHO05D004281 4.1e-18 95.9 191 37.7
BcaC04g24140 Brassica carinata HOM05D003611 ORTHO05D004281 1.2e-17 94.4 212 35.4
C09p00670 Brassica napus HOM05D003611 ORTHO05D004281 1.2e-17 94.4 212 35.4
BolC9t53001H Brassica oleracea HOM05D003611 ORTHO05D004281 1.2e-17 94.4 212 35.4
CARHR249020 Cardamine hirsuta HOM05D003611 ORTHO05D004281 2.7e-17 93.2 195 35.9
A09p00050 Brassica napus HOM05D003611 ORTHO05D004281 5.9e-17 92.0 218 33.5
C03p38980 Brassica napus HOM05D003611 ORTHO05D004281 1.0e-16 91.3 191 36.1
BraA09t35736Z Brassica rapa HOM05D003611 ORTHO05D004281 1.0e-16 91.3 208 34.6
A03p31960 Brassica napus HOM05D003611 ORTHO05D004281 1.5e-15 87.4 193 36.3
BraA03t12368Z Brassica rapa HOM05D003611 ORTHO05D004281 1.5e-15 87.4 193 36.3
Dinv32512 Davidia involucrata HOM05D003611 ORTHO05D004281 1.9e-15 87.0 69 60.9
Lalb_Chr17g0339131 Lupinus albus HOM05D003611 ORTHO05D004281 4.3e-15 85.9 180 35.6
Cfa016292 Carpinus fangiana HOM05D003611 ORTHO05D004281 5.6e-15 85.5 200 34.5
HPP92_002605 Vanilla planifolia HOM05D046274 ORTHO05D004281 4.7e-14 82.4 203 36.9
Haze_00050 Corylus avellana HOM05D003611 ORTHO05D004281 8.0e-14 81.6 145 39.3
BcaB01g02151 Brassica carinata HOM05D003611 ORTHO05D004281 3.1e-13 79.7 204 33.8
Aa31LG5G730 Aethionema arabicum HOM05D003611 ORTHO05D004281 4.0e-13 79.3 151 35.8
Atru.chr1.351 Acer truncatum HOM05D003611 ORTHO05D004281 1.5e-12 77.4 217 33.2
BcaB05g23959 Brassica carinata HOM05D003611 ORTHO05D004281 2.0e-12 77.0 197 32.0
ATR0661G469 Amborella trichopoda HOM05D003611 ORTHO05D004281 1.3e-11 74.3 165 40.0
GSVIVG01028853001 Vitis vinifera HOM05D003611 ORTHO05D004281 1.7e-11 73.9 189 32.8
BcaC03g16055 Brassica carinata HOM05D003611 ORTHO05D004281 1.7e-08 63.9 78 46.2
Actinidia10062 Actinidia chinensis HOM05D003611 ORTHO05D004281 1.5e-07 60.8 72 41.7
C02p38200 Brassica napus HOM05D003611 ORTHO05D004281 2.5e-07 60.1 151 31.8
BolC2t09835H Brassica oleracea HOM05D003611 ORTHO05D004281 2.5e-07 60.1 151 31.8
HPP92_002730 Vanilla planifolia HOM05D046274 ORTHO05D004281 4.3e-07 59.3 150 34.7
Lsat_1_v5_gn_4_35681 Lactuca sativa HOM05D003611 ORTHO05D004281 8.1e-06 55.1 174 31.0


User provided reference genes

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