Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0847 Trochodendron aralioides HOM05D002915 ORTHO05D003004 9.5e-56 219.9 111 100.0
TAR629G0058 Trochodendron aralioides HOM05D002915 ORTHO05D003004 2.8e-23 112.1 112 57.1
TAR629G0865 Trochodendron aralioides HOM05D002915 ORTHO05D003004 3.4e-21 105.1 112 54.5
Dinv14798 Davidia involucrata HOM05D002915 ORTHO05D003004 1.6e-18 96.3 110 52.7
CiPaw.06G099700 Carya illinoinensis HOM05D002915 ORTHO05D003004 4.6e-18 94.7 112 47.3
Atru.chr11.2244 Acer truncatum HOM05D002915 ORTHO05D003004 1.3e-17 93.2 101 48.5
Atru.chr11.2259 Acer truncatum HOM05D002915 ORTHO05D003004 1.3e-17 93.2 101 48.5
Lsat_1_v5_gn_8_150181 Lactuca sativa HOM05D000825 ORTHO05D003684 1.8e-17 92.8 111 49.5
Lj6A821T72 Lonicera japonica HOM05D002915 ORTHO05D003004 8.7e-17 90.5 86 52.3
Lj6A815T43 Lonicera japonica HOM05D002915 ORTHO05D003004 1.9e-16 89.4 110 43.6
Sabra13G0007400 Salix brachista HOM05D002915 ORTHO05D003004 1.9e-16 89.4 110 47.3
Hma1.2p1_0167F.1_g073810 Hydrangea macrophylla HOM05D002915 ORTHO05D003004 2.5e-16 89.0 84 54.8
MD16G1169500 Malus domestica HOM05D002915 ORTHO05D003004 5.7e-16 87.8 85 48.2
Haze_24934 Corylus avellana HOM05D002915 ORTHO05D003004 9.7e-16 87.0 83 48.2
Potri.001G321400 Populus trichocarpa HOM05D002915 ORTHO05D003004 1.3e-15 86.7 83 54.2
CSS0045033 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 1.6e-15 86.3 86 54.7
Ciclev10033456m.g Citrus clementina HOM05D002915 ORTHO05D003004 1.6e-15 86.3 101 44.6
Rhsim12G0105300 Rhododendron simsii HOM05D002915 ORTHO05D003004 1.6e-15 86.3 86 53.5
MD16G1170100 Malus domestica HOM05D002915 ORTHO05D003004 2.2e-15 85.9 101 41.6
Potri.013G008800 Populus trichocarpa HOM05D002915 ORTHO05D003004 2.2e-15 85.9 112 47.3
Rhsim02G0221300 Rhododendron simsii HOM05D002915 ORTHO05D003004 2.2e-15 85.9 86 53.5
HanXRQChr08g0207481 Helianthus annuus HOM05D002915 ORTHO05D003004 3.7e-15 85.1 111 47.7
Manes.11G084185 Manihot esculenta HOM05D002915 ORTHO05D003004 3.7e-15 85.1 101 45.5
Rhsim12G0105400 Rhododendron simsii HOM05D002915 ORTHO05D003004 4.8e-15 84.7 86 55.8
Rhsim13G0213700 Rhododendron simsii HOM05D002915 ORTHO05D003004 4.8e-15 84.7 86 52.3
TAR629G2135 Trochodendron aralioides HOM05D002915 ORTHO05D003004 4.8e-15 84.7 93 47.3
Haze_14809 Corylus avellana HOM05D002915 ORTHO05D003004 6.3e-15 84.3 111 43.2
PGR142G3351 Punica granatum HOM05D002915 ORTHO05D003004 6.3e-15 84.3 84 48.8
Cfa002665 Carpinus fangiana HOM05D002915 ORTHO05D003004 8.2e-15 84.0 104 41.3
MELO3C029741.2 Cucumis melo HOM05D002915 ORTHO05D003004 8.2e-15 84.0 89 48.3
CsaV3_1G004340 Cucumis sativus L. HOM05D002915 ORTHO05D003004 1.4e-14 83.2 89 48.3
Manes.12G014800 Manihot esculenta HOM05D002915 ORTHO05D003004 1.4e-14 83.2 101 46.5
ECA233G1149 Erigeron canadensis HOM05D000825 ORTHO05D003004 2.4e-14 82.4 114 47.4
PSO339G6727 Papaver somniferum HOM05D002915 ORTHO05D003004 2.4e-14 82.4 84 45.2
PSO832G1590 Papaver somniferum HOM05D002915 ORTHO05D003004 2.4e-14 82.4 84 47.6
vmacro16134 Vaccinium macrocarpon HOM05D002915 ORTHO05D003004 3.1e-14 82.0 86 51.2
Manes.13G015600 Manihot esculenta HOM05D002915 ORTHO05D003004 4.1e-14 81.6 83 51.8
PSO384G2811 Papaver somniferum HOM05D002915 ORTHO05D003004 4.1e-14 81.6 84 47.6
PSO384G3355 Papaver somniferum HOM05D002915 ORTHO05D003004 4.1e-14 81.6 84 47.6
Gohir.A11G040100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 9.0e-14 80.5 98 41.8
MELO3C034049.2 Cucumis melo HOM05D002915 ORTHO05D003004 1.2e-13 80.1 89 43.8
Manes.12G023850 Manihot esculenta HOM05D002915 ORTHO05D003004 1.2e-13 80.1 99 45.5
PSO782G5303 Papaver somniferum HOM05D002915 ORTHO05D003004 1.5e-13 79.7 83 48.2
ClCG11G013100 Citrullus lanatus HOM05D002915 ORTHO05D003004 2.0e-13 79.3 107 42.1
Cc08_g03020 Coffea canephora HOM05D002915 ORTHO05D003004 2.6e-13 79.0 87 46.0
CiPaw.05G115500 Carya illinoinensis HOM05D002915 ORTHO05D003004 3.4e-13 78.6 93 45.2
Cc00_g21400 Coffea canephora HOM05D002915 ORTHO05D003004 3.4e-13 78.6 85 44.7
CiPaw.05G115300 Carya illinoinensis HOM05D002915 ORTHO05D003004 5.9e-13 77.8 93 45.2
CiPaw.05G115400 Carya illinoinensis HOM05D002915 ORTHO05D003004 5.9e-13 77.8 93 45.2
Atru.chr1.711 Acer truncatum HOM05D002915 ORTHO05D003004 7.6e-13 77.4 101 43.6
Thecc.03G155900 Theobroma cacao HOM05D002915 ORTHO05D003004 7.6e-13 77.4 108 39.8
Actinidia25760 Actinidia chinensis HOM05D002915 ORTHO05D003004 1.3e-12 76.6 86 46.5
Lalb_Chr13g0303601 Lupinus albus HOM05D002915 ORTHO05D003004 1.3e-12 76.6 108 39.8
Oeu033490.1 Olea europaea HOM05D002915 ORTHO05D003004 1.3e-12 76.6 102 40.2
Migut.F00476 Erythranthe guttata HOM05D002915 ORTHO05D003004 1.7e-12 76.3 93 41.9
Atru.chr1.712 Acer truncatum HOM05D002915 ORTHO05D003004 2.2e-12 75.9 101 42.6
MELO3C011803.2 Cucumis melo HOM05D002915 ORTHO05D003004 2.9e-12 75.5 113 38.9
Medtr5g033770 Medicago truncatula HOM05D002915 ORTHO05D003004 2.9e-12 75.5 86 40.7
Prupe.1G137300 Prunus persica HOM05D002915 ORTHO05D003004 2.9e-12 75.5 100 40.0
TWI09G1418 Tripterygium wilfordii HOM05D002915 ORTHO05D003004 2.9e-12 75.5 92 42.4
Cc03_g08730 Coffea canephora HOM05D002915 ORTHO05D003004 3.8e-12 75.1 85 43.5
Glyma.07G247800 Glycine max HOM05D002915 ORTHO05D003004 3.8e-12 75.1 87 44.8
Migut.C00066 Erythranthe guttata HOM05D002915 ORTHO05D003004 5.0e-12 74.7 101 39.6
FAN19G1392 Fragaria x ananassa HOM05D002915 ORTHO05D003004 5.0e-12 74.7 106 40.6
Gorai.007G046700 Gossypium raimondii HOM05D002915 ORTHO05D003004 6.5e-12 74.3 98 39.8
Thecc.09G039200 Theobroma cacao HOM05D002915 ORTHO05D003004 8.5e-12 73.9 90 42.2
Aqoxy1G01229 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 1.1e-11 73.6 100 41.0
QL03p054762 Quercus lobata HOM05D002915 ORTHO05D003004 1.1e-11 73.6 112 42.0
Aqoxy7G00055 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 1.4e-11 73.2 84 44.0
RcHm_v2.0_Chr4g0422141 Rosa chinensis HOM05D002915 ORTHO05D003004 1.4e-11 73.2 101 38.6
Glyma.02G238900 Glycine max HOM05D002915 ORTHO05D003004 1.9e-11 72.8 85 44.7
Lj4g0001673 Lotus japonicus HOM05D002915 ORTHO05D003004 1.9e-11 72.8 107 40.2
Atru.chr11.2288 Acer truncatum HOM05D002915 ORTHO05D003004 2.5e-11 72.4 84 46.4
Sed0005801 Sechium edule HOM05D002915 ORTHO05D003004 2.5e-11 72.4 84 40.5
CsaV3_5G029620 Cucumis sativus L. HOM05D002915 ORTHO05D003004 3.2e-11 72.0 85 41.2
Migut.C00063 Erythranthe guttata HOM05D002915 ORTHO05D003004 3.2e-11 72.0 101 38.6
Eucgr.H01273 Eucalyptus grandis HOM05D002915 ORTHO05D003004 3.2e-11 72.0 81 42.0
Psat0s1573g0120 Pisum sativum HOM05D002915 ORTHO05D003004 3.2e-11 72.0 85 38.8
Lj3g0023229 Lotus japonicus HOM05D002915 ORTHO05D003004 4.2e-11 71.6 107 41.1
Medtr3g075360 Medicago truncatula HOM05D002915 ORTHO05D003004 4.2e-11 71.6 98 34.7
Cpa.g.sc3.322 Carica papaya HOM05D002915 ORTHO05D003004 5.5e-11 71.2 112 41.1
Lj4g0008862 Lotus japonicus HOM05D002915 ORTHO05D003004 5.5e-11 71.2 107 36.4
Migut.H01084 Erythranthe guttata HOM05D002915 ORTHO05D003004 7.2e-11 70.9 101 37.6
Lj1g0003622 Lotus japonicus HOM05D002915 ORTHO05D003004 7.2e-11 70.9 103 40.8
TPR.G3196 Trifolium pratense HOM05D002915 ORTHO05D003004 7.2e-11 70.9 88 40.9
Ciclev10006753m.g Citrus clementina HOM05D002915 ORTHO05D003004 9.4e-11 70.5 78 47.4
Cc11_g03110 Coffea canephora HOM05D002915 ORTHO05D003004 9.4e-11 70.5 85 41.2
Duzib168G1329 Durio zibethinus HOM05D002915 ORTHO05D003004 9.4e-11 70.5 86 44.2
Glyma.17G026300 Glycine max HOM05D002915 ORTHO05D003004 9.4e-11 70.5 115 40.0
Lj4g0014849 Lotus japonicus HOM05D002915 ORTHO05D003004 9.4e-11 70.5 102 39.2
Lalb_Chr18g0050831 Lupinus albus HOM05D002915 ORTHO05D003004 9.4e-11 70.5 110 41.8
DCAR_018110 Daucus carota HOM05D002915 ORTHO05D003004 1.2e-10 70.1 107 37.4
Duzib150G0710 Durio zibethinus HOM05D002915 ORTHO05D003004 1.2e-10 70.1 89 42.7
FAN26G0404 Fragaria x ananassa HOM05D002915 ORTHO05D003004 1.2e-10 70.1 105 38.1
TPR.G23884 Trifolium pratense HOM05D002915 ORTHO05D003004 1.2e-10 70.1 94 39.4
Hund03449 Selenicereus undatus HOM05D002915 ORTHO05D003004 1.6e-10 69.7 84 39.3
Cc02_g04260 Coffea canephora HOM05D002915 ORTHO05D003004 2.1e-10 69.3 109 40.4
Medtr4g119850 Medicago truncatula HOM05D002915 ORTHO05D003004 2.1e-10 69.3 86 39.5
Nn1g09544 Nelumbo nucifera HOM05D002915 ORTHO05D003004 2.1e-10 69.3 83 47.0
Psat4g025920 Pisum sativum HOM05D002915 ORTHO05D003004 2.1e-10 69.3 86 39.5
Aqoxy1G00479 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 2.7e-10 68.9 84 38.1
Sopen04g019620 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-10 68.9 89 38.2
SGA_v2.0_scaffold51G18778 Striga asiatica HOM05D002915 ORTHO05D003004 3.6e-10 68.6 86 43.0
Gohir.D11G043350 Gossypium hirsutum HOM05D002915 ORTHO05D003004 4.6e-10 68.2 98 39.8
Lj6g0013707 Lotus japonicus HOM05D002915 ORTHO05D003004 4.6e-10 68.2 81 43.2
PGSC0003DMG400021580 Solanum tuberosum HOM05D002915 ORTHO05D003004 4.6e-10 68.2 96 36.5
Cc00_g09710 Coffea canephora HOM05D002915 ORTHO05D003004 6.1e-10 67.8 107 37.4
Aqoxy4G02244 Aquilegia oxysepala HOM05D002915 ORTHO05D003004 7.9e-10 67.4 86 41.9
FAN07G0523 Fragaria x ananassa HOM05D002915 ORTHO05D003004 7.9e-10 67.4 104 39.4
FAN17G1773 Fragaria x ananassa HOM05D002915 ORTHO05D003004 1.0e-09 67.0 104 39.4
Dinv28571 Davidia involucrata HOM05D002915 ORTHO05D003004 1.4e-09 66.6 88 40.9
FAN12G2317 Fragaria x ananassa HOM05D002915 ORTHO05D003004 1.4e-09 66.6 101 36.6
Lj6g0019512 Lotus japonicus HOM05D002915 ORTHO05D003004 1.4e-09 66.6 81 39.5
Thecc.06G218700 Theobroma cacao HOM05D002915 ORTHO05D003004 1.4e-09 66.6 99 38.4
CAN.G853.27 Capsicum annuum HOM05D002915 ORTHO05D003004 2.3e-09 65.9 111 35.1
TPR.G19429 Trifolium pratense HOM05D002915 ORTHO05D003004 2.3e-09 65.9 96 35.4
CAN.G1143.27 Capsicum annuum HOM05D002915 ORTHO05D003004 3.0e-09 65.5 109 33.0
Gohir.A05G169100 Gossypium hirsutum HOM05D002915 ORTHO05D003004 3.9e-09 65.1 90 38.9
Thhalv10015897m.g Eutrema salsugineum HOM05D028662 ORTHO05D029345 5.1e-09 64.7 84 36.9
Lj2g0014982 Lotus japonicus HOM05D002915 ORTHO05D003004 5.1e-09 64.7 110 36.4
Lj4g0025234 Lotus japonicus HOM05D002915 ORTHO05D003004 5.1e-09 64.7 106 36.8
Lj2g0026934 Lotus japonicus HOM05D002915 ORTHO05D003004 6.7e-09 64.3 78 39.7
Lj5g0000576 Lotus japonicus HOM05D002915 ORTHO05D003004 6.7e-09 64.3 103 36.9
Lj5g0020165 Lotus japonicus HOM05D002915 ORTHO05D003004 6.7e-09 64.3 103 36.9
DCAR_016182 Daucus carota HOM05D002915 ORTHO05D003004 8.8e-09 63.9 114 36.8
CANSAT64G2697 Cannabis sativa HOM05D002915 ORTHO05D003004 1.1e-08 63.5 88 38.6
COL.COLO4_36468 Corchorus olitorius HOM05D002915 ORTHO05D003004 1.1e-08 63.5 91 39.6
TPR.G19430 Trifolium pratense HOM05D002915 ORTHO05D003004 1.1e-08 63.5 101 36.6
DCAR_018111 Daucus carota HOM05D002915 ORTHO05D003004 1.5e-08 63.2 106 32.1
Lj5g0016376 Lotus japonicus HOM05D002915 ORTHO05D003004 1.5e-08 63.2 101 37.6
Phvul.002G142400 Phaseolus vulgaris HOM05D002915 ORTHO05D003004 1.5e-08 63.2 98 34.7
arahy.Tifrunner.gnm1.ann1.J68HPB Arachis hypogaea HOM05D002915 ORTHO05D003004 3.3e-08 62.0 84 42.9
Cc05_g03590 Coffea canephora HOM05D002915 ORTHO05D003004 3.3e-08 62.0 88 40.9
Duzib168G1942 Durio zibethinus HOM05D002915 ORTHO05D003004 3.3e-08 62.0 86 39.5
PGSC0003DMG400037269 Solanum tuberosum HOM05D002915 ORTHO05D003004 3.3e-08 62.0 113 35.4
Lj1g0028201 Lotus japonicus HOM05D002915 ORTHO05D003004 5.7e-08 61.2 113 36.3
Migut.H01190 Erythranthe guttata HOM05D002915 ORTHO05D003004 7.4e-08 60.8 96 35.4
Thhalv10019573m.g Eutrema salsugineum HOM05D002915 ORTHO05D003004 7.4e-08 60.8 103 35.9
Gohir.D05G172300 Gossypium hirsutum HOM05D002915 ORTHO05D003004 7.4e-08 60.8 90 37.8
Gorai.009G177500 Gossypium raimondii HOM05D002915 ORTHO05D003004 1.3e-07 60.1 90 37.8
FAN23G0131 Fragaria x ananassa HOM05D002915 ORTHO05D003004 1.7e-07 59.7 71 45.1
Lj4g0002182 Lotus japonicus HOM05D002915 ORTHO05D003004 1.7e-07 59.7 121 32.2
Lalb_Chr10g0105601 Lupinus albus HOM05D002915 ORTHO05D003004 1.7e-07 59.7 74 40.5
PGSC0003DMG400043877 Solanum tuberosum HOM05D002915 ORTHO05D003004 1.7e-07 59.7 86 38.4
CARHR060200 Cardamine hirsuta HOM05D002915 ORTHO05D003004 2.8e-07 58.9 96 31.2
Gohir.D09G108500 Gossypium hirsutum HOM05D002915 ORTHO05D003004 3.7e-07 58.5 84 38.1
Dinv28573 Davidia involucrata HOM05D002915 ORTHO05D003004 4.8e-07 58.2 85 38.8
Lj3g0011377 Lotus japonicus HOM05D002915 ORTHO05D003004 4.8e-07 58.2 73 39.7
arahy.Tifrunner.gnm1.ann1.JTPM3R Arachis hypogaea HOM05D000176 ORTHO05D000106 6.3e-07 57.8 69 43.5
ECA234G1395 Erigeron canadensis HOM05D004805 ORTHO05D005756 6.3e-07 57.8 107 41.1
Sp5g30010 Schrenkiella parvula HOM05D002915 ORTHO05D003004 8.2e-07 57.4 105 31.4
Thhalv10019642m.g Eutrema salsugineum HOM05D002915 ORTHO05D003004 1.1e-06 57.0 91 31.9
Thhalv10002926m.g Eutrema salsugineum HOM05D028662 ORTHO05D029345 1.4e-06 56.6 79 35.4
Lj3g0026757 Lotus japonicus HOM05D002915 ORTHO05D003004 1.8e-06 56.2 73 37.0
Medtr4g123430 Medicago truncatula HOM05D002915 ORTHO05D003004 1.8e-06 56.2 106 33.0
SEGI_33630 Sequoiadendron giganteum HOM05D001945 ORTHO05D002048 2.4e-06 55.8 94 38.3
Ca_21504_v3 Cicer arietinum L. HOM05D002915 ORTHO05D003004 3.1e-06 55.5 112 33.9
Gohir.D09G108400 Gossypium hirsutum HOM05D002915 ORTHO05D003004 3.1e-06 55.5 84 38.1
PGSC0003DMG400040843 Solanum tuberosum HOM05D002915 ORTHO05D003004 3.1e-06 55.5 88 38.6
ATR0564G316 Amborella trichopoda HOM05D031042 ORTHO05D026557 4.1e-06 55.1 90 35.6
BcaB01g01525 Brassica carinata HOM05D004416 ORTHO05D005439 4.1e-06 55.1 83 32.5
BcaB07g33300 Brassica carinata HOM05D004416 ORTHO05D005439 4.1e-06 55.1 86 31.4
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 4.1e-06 55.1 122 27.9
Gorai.006G126200 Gossypium raimondii HOM05D002915 ORTHO05D003004 4.1e-06 55.1 84 35.7
BcaB08g34713 Brassica carinata HOM05D004416 ORTHO05D005439 5.3e-06 54.7 92 28.3
C07p09190 Brassica napus HOM05D004416 ORTHO05D005439 6.9e-06 54.3 86 30.2
Gohir.A09G111900 Gossypium hirsutum HOM05D002915 ORTHO05D003004 6.9e-06 54.3 84 36.9
BcaB06g26187 Brassica carinata HOM05D004416 ORTHO05D005439 9.1e-06 53.9 83 30.1


User provided reference genes

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