Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 4.4e-203 711.1 359 100.0
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 1.2e-168 596.7 359 82.2
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 2.7e-168 595.5 359 81.9
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 3.0e-167 592.0 359 82.7
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 3.3e-166 588.6 359 81.6
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 7.4e-166 587.4 359 80.2
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 3.7e-165 585.1 359 79.7
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 9.0e-164 580.5 359 80.8
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 3.4e-163 578.6 359 78.3
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 3.4e-163 578.6 359 78.3
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 7.6e-163 577.4 360 81.7
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 1.7e-162 576.2 360 80.3
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 3.8e-162 575.1 359 78.0
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 1.9e-161 572.8 360 80.3
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 5.5e-161 571.2 323 86.7
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 2.1e-160 569.3 357 77.6
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 3.5e-160 568.5 359 78.8
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 6.0e-160 567.8 359 78.8
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 3.0e-159 565.5 359 78.6
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 3.0e-159 565.5 359 78.6
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 1.5e-158 563.1 360 77.8
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 1.3e-157 560.1 352 77.3
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 3.7e-157 558.5 346 82.4
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 4.8e-157 558.1 362 77.9
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 1.1e-156 557.0 359 76.9
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 1.4e-156 556.6 361 75.9
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 1.8e-156 556.2 359 76.6
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 5.3e-156 554.7 359 76.3
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 5.3e-156 554.7 359 75.8
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 4.5e-155 551.6 359 75.2
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 7.6e-155 550.8 359 77.7
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 1.0e-154 550.4 361 75.3
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 1.4e-153 546.6 360 75.3
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 3.2e-153 545.4 359 74.9
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 4.2e-153 545.0 359 75.5
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 7.1e-153 544.3 359 76.9
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 2.3e-151 539.3 361 75.6
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 3.9e-151 538.5 359 74.1
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 8.7e-151 537.3 359 73.0
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 2.5e-150 535.8 360 73.1
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 3.3e-150 535.4 359 72.1
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 2.8e-149 532.3 359 73.5
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 2.8e-149 532.3 360 73.3
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 3.7e-149 531.9 360 72.5
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 2.4e-148 529.3 410 65.9
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 2.4e-148 529.3 361 73.4
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 4.1e-148 528.5 361 73.1
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 6.9e-148 527.7 378 70.1
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 1.2e-147 526.9 361 73.1
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 2.0e-147 526.2 380 71.1
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 5.0e-146 521.5 361 71.2
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 6.5e-146 521.2 358 70.9
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 1.6e-144 516.5 355 71.8
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 3.6e-144 515.4 361 70.1
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 3.6e-144 515.4 361 70.1
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 7.9e-144 514.2 370 71.1
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 1.8e-143 513.1 360 70.0
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 2.3e-143 512.7 361 69.8
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 1.1e-142 510.4 361 69.3
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 5.7e-142 508.1 361 69.3
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 1.3e-141 506.9 365 69.6
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 1.3e-141 506.9 407 67.1
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 3.7e-141 505.4 326 75.5
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 4.8e-141 505.0 359 71.0
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 7.7e-139 497.7 367 68.7
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 1.1e-137 493.8 342 71.1
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 2.0e-134 483.0 360 66.7
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 7.0e-132 474.6 357 68.1
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 1.2e-131 473.8 346 65.6
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 4.5e-131 471.9 359 65.2
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 3.2e-129 465.7 346 68.2
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 3.2e-129 465.7 358 67.6
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 1.6e-128 463.4 290 79.3
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 2.1e-128 463.0 378 65.1
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 4.2e-121 438.7 357 61.9
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 4.0e-119 432.2 329 67.5
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 4.4e-118 428.7 329 66.6
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 4.1e-116 422.2 301 69.1
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 2.0e-115 419.9 413 55.4
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 2.1e-112 409.8 252 81.3
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 2.8e-109 399.4 362 60.5
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.8e-108 396.7 384 57.8
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 3.1e-108 396.0 378 57.1
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 1.6e-107 393.7 396 54.3
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 4.4e-102 375.6 260 70.4
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 2.9e-98 362.8 367 55.0
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 2.5e-97 359.8 391 53.5
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 2.5e-97 359.8 340 54.1
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 1.6e-88 330.5 350 55.7
Zm00001eb156340 Zea mays HOM05D006225 ORTHO05D007676 1.1e-87 327.8 246 67.5
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 1.2e-86 324.3 320 49.7
Actinidia15885 Actinidia chinensis HOM05D006225 ORTHO05D007676 1.3e-77 294.3 167 83.2
RcHm_v2.0_Chr1g0351931 Rosa chinensis HOM05D006225 ORTHO05D007676 4.9e-77 292.4 167 80.2
Cc07_g08800 Coffea canephora HOM05D006225 ORTHO05D007676 2.7e-75 286.6 172 79.1
RcHm_v2.0_Chr1g0351941 Rosa chinensis HOM05D006225 ORTHO05D007676 1.8e-71 273.9 175 78.9
Peaxi162Scf00394g00621 Petunia axillaris HOM05D006225 ORTHO05D007676 5.2e-71 272.3 191 71.7
FAN06G4019 Fragaria x ananassa HOM05D006225 ORTHO05D007676 6.8e-71 271.9 175 77.7
Hund13715 Selenicereus undatus HOM05D006225 ORTHO05D007676 2.4e-68 263.5 186 69.4
Cc07_g08810 Coffea canephora HOM05D006225 ORTHO05D007676 3.5e-67 259.6 175 76.0
FAN10G1204 Fragaria x ananassa HOM05D006225 ORTHO05D007676 4.6e-67 259.2 170 71.8
Eucgr.H04974 Eucalyptus grandis HOM05D006225 ORTHO05D007676 3.0e-66 256.5 240 56.7
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 1.9e-65 253.8 307 44.3
Solyc02g086060.4 Solanum lycopersicum HOM05D006225 ORTHO05D007676 1.6e-64 250.8 179 74.3
CDE02G4721 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 1.3e-61 241.1 172 72.1
Solyc02g086070.2 Solanum lycopersicum HOM05D006225 ORTHO05D007676 2.8e-56 223.4 141 73.0
Hma1.2p1_0136F.1_g062270 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 1.8e-55 220.7 123 82.1
Oeu008428.1 Olea europaea HOM05D006225 ORTHO05D007676 1.1e-47 194.9 212 53.3
Peaxi162Scf00394g00622 Petunia axillaris HOM05D006225 ORTHO05D007676 9.0e-47 191.8 108 81.5
MD07G1125200 Malus domestica HOM05D006225 ORTHO05D007676 5.1e-42 176.0 112 72.3
arahy.Tifrunner.gnm1.ann1.8IQW6A Arachis hypogaea HOM05D006225 ORTHO05D007676 8.7e-42 175.3 112 71.4
arahy.Tifrunner.gnm1.ann1.PRIQ1K Arachis hypogaea HOM05D006225 ORTHO05D007676 2.5e-41 173.7 128 65.6
HanXRQChr13g0396101 Helianthus annuus HOM05D006225 ORTHO05D007676 2.0e-38 164.1 91 83.5
arahy.Tifrunner.gnm1.ann1.RE0KC5 Arachis hypogaea HOM05D006225 ORTHO05D007676 3.4e-38 163.3 140 60.0
CDE02G0503 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 5.0e-37 159.5 104 73.1
SHI22412 Sapria himalayana HOM05D006225 ORTHO05D007676 1.4e-36 157.9 102 72.5
arahy.Tifrunner.gnm1.ann1.QBFC9G Arachis hypogaea HOM05D006225 ORTHO05D007676 7.1e-36 155.6 126 60.3
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 7.9e-35 152.1 345 30.7
arahy.Tifrunner.gnm1.ann1.QHM34M Arachis hypogaea HOM05D006225 ORTHO05D007676 7.4e-33 145.6 134 58.2
arahy.Tifrunner.gnm1.ann1.A87HRQ Arachis hypogaea HOM05D006225 ORTHO05D007676 4.1e-31 139.8 102 66.7
arahy.Tifrunner.gnm1.ann1.FD2CEU Arachis hypogaea HOM05D006225 ORTHO05D007676 5.5e-28 129.4 104 62.5
Actinidia36322 Actinidia chinensis HOM05D006225 ORTHO05D007676 4.6e-27 126.3 82 74.4
arahy.Tifrunner.gnm1.ann1.5T0UVN Arachis hypogaea HOM05D006225 ORTHO05D007676 1.4e-26 124.8 75 74.7
CBR_g65298 Chara braunii HOM05D006225 ORTHO05D007676 3.7e-24 116.7 121 44.6
Eucgr.L03301 Eucalyptus grandis HOM05D006225 ORTHO05D007676 1.4e-23 114.8 79 72.2
Hma1.2p1_0239F.1_g099920 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 1.5e-22 111.3 78 69.2
CBR_g8910 Chara braunii HOM05D006555 ORTHO05D008376 5.0e-21 106.3 227 30.4
arahy.Tifrunner.gnm1.ann1.GQQ1MZ Arachis hypogaea HOM05D006225 ORTHO05D007676 2.5e-20 104.0 75 69.3
MD07G1125400 Malus domestica HOM05D006225 ORTHO05D007676 1.2e-19 101.7 111 53.2
MBI14_g15702_MAGBIO Magnolia biondii HOM05D006555 ORTHO05D008376 1.1e-12 78.6 306 25.5
HanXRQChr15g0474321 Helianthus annuus HOM05D006555 ORTHO05D008376 9.4e-12 75.5 339 24.2
TWI56G0535 Tripterygium wilfordii HOM05D006555 ORTHO05D008376 9.4e-12 75.5 318 25.2
Lsat_1_v5_gn_0_24261 Lactuca sativa HOM05D006555 ORTHO05D008376 2.1e-11 74.3 307 24.4
EL10Ac3g05120 Beta vulgaris HOM05D006555 ORTHO05D008376 4.7e-11 73.2 309 24.9
Duzib187G0608 Durio zibethinus HOM05D006555 ORTHO05D008376 3.0e-10 70.5 315 23.8
Lalb_Chr04g0258611 Lupinus albus HOM05D006555 ORTHO05D008376 3.0e-10 70.5 320 22.8
Sc20g0004830 Simmondsia chinensis HOM05D006555 ORTHO05D008376 1.5e-09 68.2 313 24.9
SEGI_26593 Sequoiadendron giganteum HOM05D006555 ORTHO05D008376 4.4e-09 66.6 149 30.2
Manes.17G119457 Manihot esculenta HOM05D006555 ORTHO05D008376 2.2e-08 64.3 242 24.0
Glyma.08G102000 Glycine max HOM05D006555 ORTHO05D008376 4.8e-08 63.2 349 23.2
BcaC04g24063 Brassica carinata HOM05D006225 ORTHO05D007676 1.1e-07 62.0 38 71.1
Sabra05G0090500 Salix brachista HOM05D006555 ORTHO05D008376 1.1e-07 62.0 242 26.0
Potri.005G110300 Populus trichocarpa HOM05D006555 ORTHO05D008376 2.4e-07 60.8 325 24.0
ECA246G4860 Erigeron canadensis HOM05D006555 ORTHO05D008376 2.0e-06 57.8 194 25.3
VMungo0251G3141 Vigna mungo HOM05D006555 ORTHO05D008376 2.0e-06 57.8 313 24.0


User provided reference genes

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