Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0820 Trochodendron aralioides HOM05D003542 ORTHO05D018761 3.5e-117 424.9 200 100.0
TAR375G0128 Trochodendron aralioides HOM05D003542 ORTHO05D004799 4.8e-82 308.1 161 87.0
Actinidia01250 Actinidia chinensis HOM05D003542 ORTHO05D004799 2.0e-75 286.2 161 78.9
Manes.17G001100 Manihot esculenta HOM05D003542 ORTHO05D004799 7.4e-75 284.3 180 72.2
Nn3g19110 Nelumbo nucifera HOM05D003542 ORTHO05D004799 1.4e-73 280.0 183 68.9
Gohir.A08G149000 Gossypium hirsutum HOM05D003542 ORTHO05D004799 5.3e-73 278.1 180 70.0
Gorai.004G177500 Gossypium raimondii HOM05D003542 ORTHO05D004799 5.3e-73 278.1 180 70.6
CSS0026658 Camellia sinensis var. sinensis HOM05D003542 ORTHO05D004799 6.9e-73 277.7 161 75.8
Thecc.03G319900 Theobroma cacao HOM05D003542 ORTHO05D004799 1.2e-72 276.9 161 76.4
Potri.004G235800 Populus trichocarpa HOM05D003542 ORTHO05D004799 1.5e-72 276.6 161 75.8
CiPaw.12G055200 Carya illinoinensis HOM05D003542 ORTHO05D004799 4.5e-72 275.0 178 68.0
Gohir.D08G170000 Gossypium hirsutum HOM05D003542 ORTHO05D004799 5.9e-72 274.6 180 69.4
Duzib205G1391 Durio zibethinus HOM05D003542 ORTHO05D004799 7.7e-72 274.2 161 76.4
Oeu036053.1 Olea europaea HOM05D003542 ORTHO05D004799 7.7e-72 274.2 161 75.8
Gorai.008G219000 Gossypium raimondii HOM05D003542 ORTHO05D004799 1.7e-71 273.1 161 75.8
Sc07g0007990 Simmondsia chinensis HOM05D003542 ORTHO05D004799 1.7e-71 273.1 181 68.0
Manes.15G191800 Manihot esculenta HOM05D003542 ORTHO05D004799 3.8e-71 271.9 180 70.0
TWI60G1302 Tripterygium wilfordii HOM05D003542 ORTHO05D004799 3.8e-71 271.9 180 68.3
Gohir.D12G204200 Gossypium hirsutum HOM05D003542 ORTHO05D004799 5.0e-71 271.6 161 75.2
Prupe.5G011600 Prunus persica HOM05D003542 ORTHO05D004799 6.5e-71 271.2 178 69.7
Cfa012300 Carpinus fangiana HOM05D003542 ORTHO05D004799 1.1e-70 270.4 159 73.6
CiPaw.11G074400 Carya illinoinensis HOM05D003542 ORTHO05D004799 3.2e-70 268.9 178 67.4
CsaV3_4G027890 Cucumis sativus L. HOM05D003542 ORTHO05D004799 5.5e-70 268.1 181 68.0
THA.LOC104798529 Tarenaya hassleriana HOM05D003542 ORTHO05D004799 2.1e-69 266.2 181 68.0
Phvul.003G278500 Phaseolus vulgaris HOM05D003542 ORTHO05D004799 2.7e-69 265.8 184 67.4
Glyma.16G076700 Glycine max HOM05D003542 ORTHO05D004799 3.6e-69 265.4 182 68.1
Hma1.2p1_0839F.1_g226340 Hydrangea macrophylla HOM05D003542 ORTHO05D004799 3.6e-69 265.4 161 74.5
Sed0016507 Sechium edule HOM05D003542 ORTHO05D004799 3.6e-69 265.4 181 66.3
VMungo0251G1439 Vigna mungo HOM05D003542 ORTHO05D004799 1.0e-68 263.8 184 65.8
MD06G1008500 Malus domestica HOM05D003542 ORTHO05D004799 1.8e-68 263.1 178 68.0
FvH4_5g25240 Fragaria vesca HOM05D003542 ORTHO05D004799 2.3e-68 262.7 178 67.4
GSVIVG01036881001 Vitis vinifera HOM05D003542 ORTHO05D004799 2.3e-68 262.7 161 72.7
Glyma.16G109700 Glycine max HOM05D003542 ORTHO05D004799 3.0e-68 262.3 183 66.7
Aqoxy5G03565 Aquilegia oxysepala HOM05D003542 ORTHO05D004799 3.9e-68 261.9 180 67.2
VMungo1215G0924 Vigna mungo HOM05D003542 ORTHO05D004799 3.9e-68 261.9 178 66.9
MELO3C010524.2 Cucumis melo HOM05D003542 ORTHO05D004799 5.2e-68 261.5 181 66.3
SGA_v2.0_scaffold96G29103 Striga asiatica HOM05D003542 ORTHO05D004799 5.2e-68 261.5 181 64.1
arahy.Tifrunner.gnm1.ann1.GAUN3U Arachis hypogaea HOM05D003542 ORTHO05D004799 6.7e-68 261.2 186 66.7
arahy.Tifrunner.gnm1.ann1.JPC2KC Arachis hypogaea HOM05D003542 ORTHO05D004799 6.7e-68 261.2 186 66.7
RcHm_v2.0_Chr7g0215361 Rosa chinensis HOM05D003542 ORTHO05D004799 6.7e-68 261.2 178 66.9
Glyma.01G153600 Glycine max HOM05D003542 ORTHO05D004799 8.8e-68 260.8 180 63.9
PSO502G0023 Papaver somniferum HOM05D003542 ORTHO05D004799 8.8e-68 260.8 161 72.7
FAN08G1408 Fragaria x ananassa HOM05D003542 ORTHO05D004799 1.5e-67 260.0 178 66.3
HanXRQChr06g0173181 Helianthus annuus HOM05D003542 ORTHO05D004799 1.5e-67 260.0 180 67.8
PSO675G5456 Papaver somniferum HOM05D003542 ORTHO05D004799 1.5e-67 260.0 161 72.7
arahy.Tifrunner.gnm1.ann1.2M3042 Arachis hypogaea HOM05D003542 ORTHO05D004799 2.0e-67 259.6 161 71.4
Ciclev10011269m.g Citrus clementina HOM05D003542 ORTHO05D004799 2.0e-67 259.6 180 65.6
Cc08_g05880 Coffea canephora HOM05D003542 ORTHO05D004799 2.0e-67 259.6 181 65.2
Eucgr.E01147 Eucalyptus grandis HOM05D003542 ORTHO05D004799 2.0e-67 259.6 161 69.6
AT2G35610 Arabidopsis thaliana HOM05D003542 ORTHO05D004799 3.3e-67 258.8 181 65.7
FAN13G1207 Fragaria x ananassa HOM05D003542 ORTHO05D004799 3.3e-67 258.8 178 65.7
Nitab4.5_0002603g0020 Nicotiana tabacum HOM05D003542 ORTHO05D004799 4.4e-67 258.5 183 63.4
Glyma.11G091000 Glycine max HOM05D003542 ORTHO05D004799 5.7e-67 258.1 180 63.3
Lalb_Chr05g0229201 Lupinus albus HOM05D003542 ORTHO05D004799 5.7e-67 258.1 180 65.0
Nitab4.5_0006371g0020 Nicotiana tabacum HOM05D003542 ORTHO05D004799 5.7e-67 258.1 183 63.9
Phvul.002G122000 Phaseolus vulgaris HOM05D003542 ORTHO05D004799 5.7e-67 258.1 180 63.9
CARHR129800 Cardamine hirsuta HOM05D003542 ORTHO05D004799 7.4e-67 257.7 180 65.6
DCAR_004534 Daucus carota HOM05D003542 ORTHO05D004799 7.4e-67 257.7 159 73.6
Lj4g0008068 Lotus japonicus HOM05D003542 ORTHO05D004799 7.4e-67 257.7 183 63.4
Sopen08g023950 Solanum pennellii HOM05D003542 ORTHO05D004799 7.4e-67 257.7 183 64.5
A04p27010 Brassica napus HOM05D003542 ORTHO05D004799 9.7e-67 257.3 181 64.6
BraA04t18202Z Brassica rapa HOM05D003542 ORTHO05D004799 9.7e-67 257.3 181 64.6
CANSAT80G0877 Cannabis sativa HOM05D003542 ORTHO05D004799 9.7e-67 257.3 178 66.9
BcaB02g09412 Brassica carinata HOM05D003542 ORTHO05D004799 1.3e-66 256.9 181 65.2
PGR042G1333 Punica granatum HOM05D003542 ORTHO05D004799 1.7e-66 256.5 178 62.9
Solyc08g075340.3 Solanum lycopersicum HOM05D003542 ORTHO05D004799 2.2e-66 256.1 183 63.9
Carub.0004s1730 Capsella rubella HOM05D003542 ORTHO05D004799 4.8e-66 255.0 180 65.0
Lalb_Chr05g0215151 Lupinus albus HOM05D003542 ORTHO05D004799 4.8e-66 255.0 180 64.4
Peaxi162Scf00053g00006 Petunia axillaris HOM05D003542 ORTHO05D004799 4.8e-66 255.0 161 70.2
AL4G31650 Arabidopsis lyrata HOM05D003542 ORTHO05D004799 6.3e-66 254.6 181 64.6
BcaB06g28850 Brassica carinata HOM05D003542 ORTHO05D004799 6.3e-66 254.6 181 64.6
ECA246G1310 Erigeron canadensis HOM05D003542 ORTHO05D004799 6.3e-66 254.6 180 65.6
Lj2g0004183 Lotus japonicus HOM05D003542 ORTHO05D004799 6.3e-66 254.6 178 64.6
Sp4g17820 Schrenkiella parvula HOM05D003542 ORTHO05D004799 6.3e-66 254.6 181 64.6
Aa31LG9G15750 Aethionema arabicum HOM05D003542 ORTHO05D004799 1.1e-65 253.8 159 70.4
BcaC02g11677 Brassica carinata HOM05D003542 ORTHO05D004799 1.4e-65 253.4 181 63.5
Thhalv10016368m.g Eutrema salsugineum HOM05D003542 ORTHO05D004799 1.4e-65 253.4 181 64.1
BcaC02g11676 Brassica carinata HOM05D003542 ORTHO05D004799 1.8e-65 253.1 158 69.6
TPR.G8991 Trifolium pratense HOM05D003542 ORTHO05D004799 1.8e-65 253.1 180 62.8
CAN.G998.13 Capsicum annuum HOM05D003542 ORTHO05D004799 2.4e-65 252.7 183 62.8
arahy.Tifrunner.gnm1.ann1.B24I2L Arachis hypogaea HOM05D003542 ORTHO05D004799 3.1e-65 252.3 173 67.1
A05p10120 Brassica napus HOM05D003542 ORTHO05D004799 4.1e-65 251.9 181 64.6
BraA05t19953Z Brassica rapa HOM05D003542 ORTHO05D004799 4.1e-65 251.9 181 64.6
Cc08_g05890 Coffea canephora HOM05D003542 ORTHO05D004799 4.1e-65 251.9 181 64.1
FAN18G0768 Fragaria x ananassa HOM05D003542 ORTHO05D004799 4.1e-65 251.9 193 61.7
FAN18G2203 Fragaria x ananassa HOM05D003542 ORTHO05D004799 4.1e-65 251.9 193 61.7
Rhsim11G0037300 Rhododendron simsii HOM05D003542 ORTHO05D004799 4.1e-65 251.9 204 61.3
C04p12510 Brassica napus HOM05D003542 ORTHO05D004799 5.3e-65 251.5 181 62.4
BolC4t22898H Brassica oleracea HOM05D003542 ORTHO05D004799 5.3e-65 251.5 181 62.4
HanXRQChr17g0537321 Helianthus annuus HOM05D003542 ORTHO05D004799 5.3e-65 251.5 180 66.1
Medtr5g025590 Medicago truncatula HOM05D003542 ORTHO05D004799 2.6e-64 249.2 178 62.4
Psat4g107640 Pisum sativum HOM05D003542 ORTHO05D004799 3.5e-64 248.8 178 63.5
ATR0568G062 Amborella trichopoda HOM05D003542 ORTHO05D004799 1.7e-63 246.5 183 65.0
MSTRG.25746 Avicennia marina HOM05D003542 ORTHO05D004799 1.7e-63 246.5 181 61.3
Migut.A00523 Erythranthe guttata HOM05D003542 ORTHO05D004799 3.8e-63 245.4 183 60.7
TPR.G14272 Trifolium pratense HOM05D003542 ORTHO05D004799 5.0e-63 245.0 180 63.3
Psat2g145280 Pisum sativum HOM05D003542 ORTHO05D004799 8.5e-63 244.2 178 62.4
BcaC02g07760 Brassica carinata HOM05D003542 ORTHO05D004799 1.1e-62 243.8 181 62.4
C04p64420 Brassica napus HOM05D003542 ORTHO05D004799 1.1e-62 243.8 181 62.4
BolC4t27926H Brassica oleracea HOM05D003542 ORTHO05D004799 1.1e-62 243.8 181 62.4
Medtr8g072310 Medicago truncatula HOM05D003542 ORTHO05D004799 3.2e-62 242.3 178 62.4
Cpa.g.sc352.2 Carica papaya HOM05D003542 ORTHO05D018761 5.5e-62 241.5 158 70.9
Ca_22456_v3 Cicer arietinum L. HOM05D003542 ORTHO05D004799 5.5e-62 241.5 180 62.2
Ca_25048_v3 Cicer arietinum L. HOM05D003542 ORTHO05D004799 9.4e-62 240.7 178 61.8
HanXRQChr17g0537331 Helianthus annuus HOM05D003542 ORTHO05D004799 1.0e-60 237.3 177 62.7
Cc04_g11570 Coffea canephora HOM05D003542 ORTHO05D004799 1.8e-60 236.5 161 66.5
Cc04_g11590 Coffea canephora HOM05D003542 ORTHO05D004799 2.6e-59 232.6 162 66.0
Lj8C8T8 Lonicera japonica HOM05D003542 ORTHO05D004799 1.4e-57 226.9 161 64.6
Sed0027808 Sechium edule HOM05D003542 ORTHO05D004799 7.0e-57 224.6 161 64.0
Haze_08429 Corylus avellana HOM05D003542 ORTHO05D004799 2.7e-56 222.6 124 77.4
Lsat_1_v5_gn_3_20301 Lactuca sativa HOM05D003542 ORTHO05D004799 3.8e-55 218.8 180 58.3
Lalb_Chr16g0391801 Lupinus albus HOM05D003542 ORTHO05D004799 3.8e-55 218.8 159 59.1
EL10Ac5g12587 Beta vulgaris HOM05D003542 ORTHO05D004799 6.5e-55 218.0 181 56.4
MBI15_g33455_MAGBIO Magnolia biondii HOM05D003542 ORTHO05D004799 1.5e-54 216.9 183 56.8
Sabra01G0180200 Salix brachista HOM05D003542 ORTHO05D004799 4.2e-54 215.3 160 61.2
CDE01G0249 Ceratophyllum demersum HOM05D003542 ORTHO05D004799 5.5e-54 214.9 173 57.2
ClCG11G016080 Citrullus lanatus HOM05D003542 ORTHO05D004799 1.2e-53 213.8 124 73.4
THA.LOC104814389 Tarenaya hassleriana HOM05D003542 ORTHO05D004799 3.6e-53 212.2 165 60.6
Hund14306 Selenicereus undatus HOM05D003542 ORTHO05D004799 2.3e-52 209.5 182 55.5
COL.COLO4_16751 Corchorus olitorius HOM05D003542 ORTHO05D004799 3.0e-52 209.1 148 64.2
Cc04_g11580 Coffea canephora HOM05D003542 ORTHO05D004799 1.7e-50 203.4 154 63.6
SHI32767 Sapria himalayana HOM05D003542 ORTHO05D004799 2.2e-50 203.0 160 59.4
SalBow4G0461 Salvia bowleyana HOM05D003542 ORTHO05D004799 4.8e-50 201.8 183 54.1
AUR62030410 Chenopodium quinoa HOM05D003542 ORTHO05D004799 1.2e-48 197.2 181 53.0
SEGI_27818 Sequoiadendron giganteum HOM05D003542 ORTHO05D004799 2.7e-48 196.1 162 56.2
AUR62010484 Chenopodium quinoa HOM05D003542 ORTHO05D004799 1.3e-47 193.7 181 51.9
Mapoly0019s0126 Marchantia polymorpha HOM05D003542 ORTHO05D004799 3.3e-46 189.1 162 51.9
HPP92_014853 Vanilla planifolia HOM05D003542 ORTHO05D004799 4.2e-46 188.7 155 58.7
Aa31LG2G14340 Aethionema arabicum HOM05D003542 ORTHO05D004799 7.2e-46 188.0 173 54.9
SMO329G0009 Selaginella moellendorffii HOM05D003542 ORTHO05D004799 1.3e-42 177.2 157 49.7
AagrBONN_evm.TU.Sc2ySwM_344.2406 Anthoceros agrestis HOM05D003542 ORTHO05D004799 1.8e-41 173.3 159 49.1
Pp3c12_18450 Physcomitrium patens HOM05D003542 ORTHO05D004799 7.8e-40 167.9 181 47.0
QL12p003762 Quercus lobata HOM05D003542 ORTHO05D004799 1.1e-38 164.1 124 62.9
PSO675G7261 Papaver somniferum HOM05D003542 ORTHO05D018761 2.6e-35 152.9 136 55.1
CDE04G2998 Ceratophyllum demersum HOM05D003542 ORTHO05D018761 2.2e-34 149.8 84 76.2
Atru.chr8.2622 Acer truncatum HOM05D003542 ORTHO05D004799 3.7e-34 149.1 121 59.5
MBI06_g04285_MAGBIO Magnolia biondii HOM05D003542 ORTHO05D018761 5.6e-30 135.2 192 43.2
Ah.12g058430 Amaranthus hybridus HOM05D003542 ORTHO05D004799 2.3e-28 129.8 181 37.6
Gohir.A12G201400 Gossypium hirsutum HOM05D003542 ORTHO05D004799 5.4e-25 118.6 75 69.3
MCO06G136 Micromonas commoda HOM05D003542 ORTHO05D004799 1.6e-24 117.1 147 41.5
BcaB06g28849 Brassica carinata HOM05D003542 ORTHO05D018761 2.5e-22 109.8 52 84.6
MD16G1285600 Malus domestica HOM05D003542 ORTHO05D018761 4.3e-22 109.0 75 68.0
BcaC02g11616 Brassica carinata HOM05D003542 ORTHO05D004799 6.0e-16 88.6 100 47.0
Cre14.g629000 Chlamydomonas reinhardtii HOM05D003542 ORTHO05D004799 7.8e-16 88.2 153 37.3
C04p13130 Brassica napus HOM05D003542 ORTHO05D004799 6.6e-15 85.1 97 46.4
Cre07.g332500 Chlamydomonas reinhardtii HOM05D003542 ORTHO05D004799 6.6e-15 85.1 129 31.8
vmacro00095 Vaccinium macrocarpon HOM05D003542 ORTHO05D004799 7.1e-09 65.1 40 72.5
PRCOL_00003662 Prasinoderma coloniale HOM05D003542 ORTHO05D004799 8.7e-07 58.2 135 31.9


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