Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0777 Trochodendron aralioides HOM05D006127 ORTHO05D007465 8.7e-299 1029.6 560 100.0
Dinv35267 Davidia involucrata HOM05D006127 ORTHO05D007465 1.1e-200 703.7 463 76.7
QL09p012458 Quercus lobata HOM05D006127 ORTHO05D007465 2.6e-194 682.6 470 73.8
Gohir.D11G229300 Gossypium hirsutum HOM05D006127 ORTHO05D007465 7.6e-194 681.0 474 73.6
Gorai.003G069400 Gossypium raimondii HOM05D006127 ORTHO05D007465 7.6e-194 681.0 474 73.6
COL.COLO4_30292 Corchorus olitorius HOM05D006127 ORTHO05D007465 2.2e-193 679.5 475 73.3
Atru.chr1.338 Acer truncatum HOM05D006127 ORTHO05D007465 3.8e-193 678.7 476 71.6
Cfa016302 Carpinus fangiana HOM05D006127 ORTHO05D007465 5.5e-192 674.9 472 73.1
Manes.06G153500 Manihot esculenta HOM05D006127 ORTHO05D007465 5.5e-192 674.9 473 72.7
Gohir.A11G225200 Gossypium hirsutum HOM05D006127 ORTHO05D007465 9.3e-192 674.1 470 73.6
Nn6g32416 Nelumbo nucifera HOM05D006127 ORTHO05D007465 1.6e-191 673.3 472 75.0
Potri.017G148900 Populus trichocarpa HOM05D006127 ORTHO05D007465 6.0e-191 671.4 465 72.7
Sabra17G0124200 Salix brachista HOM05D006127 ORTHO05D007465 6.0e-191 671.4 472 71.6
Prupe.2G302400 Prunus persica HOM05D006127 ORTHO05D007465 7.9e-191 671.0 471 73.2
Thecc.03G186000 Theobroma cacao HOM05D006127 ORTHO05D007465 1.0e-190 670.6 472 72.9
Ciclev10004691m.g Citrus clementina HOM05D006127 ORTHO05D007465 3.0e-190 669.1 471 72.2
CSS0002355 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 1.5e-189 666.8 466 73.6
TWI23G0320 Tripterygium wilfordii HOM05D006127 ORTHO05D007465 2.5e-189 666.0 475 72.8
CSS0021566 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 3.1e-187 659.1 469 73.1
MD07G1280200 Malus domestica HOM05D006127 ORTHO05D007465 2.6e-186 656.0 472 71.6
Potri.004G072100 Populus trichocarpa HOM05D006127 ORTHO05D007465 1.7e-185 653.3 464 72.2
CiPaw.06G004100 Carya illinoinensis HOM05D006127 ORTHO05D007465 3.2e-184 649.0 463 71.9
MD01G1210100 Malus domestica HOM05D006127 ORTHO05D007465 2.3e-182 642.9 452 72.3
Nitab4.5_0000472g0230 Nicotiana tabacum HOM05D006127 ORTHO05D007465 3.9e-182 642.1 467 70.4
PGSC0003DMG400009503 Solanum tuberosum HOM05D006127 ORTHO05D007465 6.7e-182 641.3 467 71.1
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 2.5e-181 639.4 569 62.4
Actinidia34165 Actinidia chinensis HOM05D006127 ORTHO05D007465 3.3e-181 639.0 552 62.7
Eucgr.A02719 Eucalyptus grandis HOM05D006127 ORTHO05D007465 3.3e-181 639.0 470 69.1
CiPaw.05G261300 Carya illinoinensis HOM05D006127 ORTHO05D007465 3.7e-180 635.6 444 72.5
Solyc03g007620.3 Solanum lycopersicum HOM05D006127 ORTHO05D007465 4.8e-180 635.2 467 70.2
Sopen03g003570 Solanum pennellii HOM05D006127 ORTHO05D007465 6.3e-180 634.8 467 70.2
PSO478G4852 Papaver somniferum HOM05D006127 ORTHO05D007465 6.9e-179 631.3 469 66.5
Peaxi162Scf00444g00314 Petunia axillaris HOM05D006127 ORTHO05D007465 6.9e-179 631.3 465 70.5
PGR044G2596 Punica granatum HOM05D006127 ORTHO05D007465 1.5e-178 630.2 475 67.6
PSO266G0017 Papaver somniferum HOM05D006127 ORTHO05D007465 1.3e-177 627.1 469 66.3
Nitab4.5_0001331g0020 Nicotiana tabacum HOM05D006127 ORTHO05D007465 2.9e-177 625.9 476 68.3
CAN.G236.3 Capsicum annuum HOM05D006127 ORTHO05D007465 4.6e-175 618.6 467 69.0
Sabra04G0047500 Salix brachista HOM05D006127 ORTHO05D007465 4.6e-175 618.6 519 63.8
Gorai.006G199600 Gossypium raimondii HOM05D006127 ORTHO05D007465 8.8e-174 614.4 475 66.3
Gohir.D09G177600 Gossypium hirsutum HOM05D006127 ORTHO05D007465 3.3e-173 612.5 475 66.1
HanXRQChr00c0486g0575011 Helianthus annuus HOM05D006127 ORTHO05D007465 5.7e-173 611.7 467 63.6
Aqoxy7G00200 Aquilegia oxysepala HOM05D006127 ORTHO05D007465 7.4e-173 611.3 453 70.9
MSTRG.8699 Avicennia marina HOM05D006127 ORTHO05D007465 7.4e-173 611.3 475 65.5
Lj1A1007G54 Lonicera japonica HOM05D006127 ORTHO05D007465 1.3e-172 610.5 479 66.8
Lj2g0027649 Lotus japonicus HOM05D006127 ORTHO05D007465 6.3e-172 608.2 465 66.0
THA.LOC104818243 Tarenaya hassleriana HOM05D006127 ORTHO05D007465 6.3e-172 608.2 473 65.5
RcHm_v2.0_Chr1g0378611 Rosa chinensis HOM05D006127 ORTHO05D007465 1.8e-171 606.7 470 67.7
Glyma.09G129300 Glycine max HOM05D006127 ORTHO05D007465 1.5e-170 603.6 476 65.3
Ca_26803_v3 Cicer arietinum L. HOM05D006127 ORTHO05D007465 1.7e-169 600.1 470 65.7
Haze_00059 Corylus avellana HOM05D006127 ORTHO05D007465 2.2e-169 599.7 472 67.4
Lalb_Chr01g0009501 Lupinus albus HOM05D006127 ORTHO05D007465 5.0e-169 598.6 464 65.3
CsaV3_5G001020 Cucumis sativus L. HOM05D006127 ORTHO05D007465 6.5e-169 598.2 471 65.6
ClCG01G000890 Citrullus lanatus HOM05D006127 ORTHO05D007465 1.9e-168 596.7 472 65.5
FAN06G1782 Fragaria x ananassa HOM05D006127 ORTHO05D007465 3.2e-168 595.9 473 66.4
FAN06G3350 Fragaria x ananassa HOM05D006127 ORTHO05D007465 3.2e-168 595.9 472 66.5
FAN10G2357 Fragaria x ananassa HOM05D006127 ORTHO05D007465 4.2e-168 595.5 472 66.7
Cc02_g02250 Coffea canephora HOM05D006127 ORTHO05D007465 7.2e-168 594.7 441 68.3
FAN10G0315 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.2e-167 594.0 472 66.5
Phvul.004G105900 Phaseolus vulgaris HOM05D006127 ORTHO05D007465 1.2e-167 594.0 476 64.5
Migut.F00277 Erythranthe guttata HOM05D006127 ORTHO05D007465 1.0e-166 590.9 472 64.6
ECA232G4568 Erigeron canadensis HOM05D006127 ORTHO05D007465 1.4e-166 590.5 468 63.2
Gohir.A09G182900 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.8e-166 590.1 456 66.4
MELO3C005842.2 Cucumis melo HOM05D006127 ORTHO05D007465 3.0e-166 589.3 472 64.2
Sed0008008 Sechium edule HOM05D006127 ORTHO05D007465 3.9e-166 589.0 471 64.1
FAN03G3352 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.5e-165 587.0 472 65.5
Sc13g0009280 Simmondsia chinensis HOM05D006127 ORTHO05D007465 4.4e-165 585.5 472 63.1
FAN03G2078 Fragaria x ananassa HOM05D006127 ORTHO05D007465 5.7e-165 585.1 464 65.5
DCAR_008898 Daucus carota HOM05D006127 ORTHO05D007465 2.8e-164 582.8 464 64.0
Aa31LG11G990 Aethionema arabicum HOM05D006127 ORTHO05D007465 5.3e-163 578.6 476 62.8
Sp2g25830 Schrenkiella parvula HOM05D006127 ORTHO05D007465 5.3e-163 578.6 471 63.1
Medtr6g053110 Medicago truncatula HOM05D006127 ORTHO05D007465 1.2e-162 577.4 470 64.9
CARHR276460 Cardamine hirsuta HOM05D006127 ORTHO05D007465 5.9e-162 575.1 472 63.1
AT5G62650 Arabidopsis thaliana HOM05D006127 ORTHO05D007465 1.3e-161 573.9 478 63.0
AL8G39630 Arabidopsis lyrata HOM05D006127 ORTHO05D007465 1.7e-161 573.5 471 63.1
Thhalv10003967m.g Eutrema salsugineum HOM05D006127 ORTHO05D007465 2.2e-161 573.2 473 62.4
Lsat_1_v5_gn_9_56840 Lactuca sativa HOM05D006127 ORTHO05D007465 6.5e-161 571.6 465 61.9
Carub.0008s2341 Capsella rubella HOM05D006127 ORTHO05D007465 3.2e-160 569.3 475 62.5
GSVIVG01028824001 Vitis vinifera HOM05D006127 ORTHO05D007465 2.7e-159 566.2 442 66.3
arahy.Tifrunner.gnm1.ann1.HXNP43 Arachis hypogaea HOM05D006127 ORTHO05D007465 4.0e-158 562.4 476 63.0
EL10Ac3g05405 Beta vulgaris HOM05D006127 ORTHO05D007465 5.7e-157 558.5 473 64.1
arahy.Tifrunner.gnm1.ann1.AR9FJK Arachis hypogaea HOM05D006127 ORTHO05D007465 9.7e-157 557.8 483 62.1
BcaC01g02503 Brassica carinata HOM05D006127 ORTHO05D007465 3.7e-156 555.8 471 61.8
BraA06t25889Z Brassica rapa HOM05D006127 ORTHO05D007465 4.8e-156 555.4 471 61.6
A06p29390 Brassica napus HOM05D006127 ORTHO05D007465 1.4e-155 553.9 475 60.8
ATR0721G168 Amborella trichopoda HOM05D006127 ORTHO05D007465 1.8e-155 553.5 454 65.0
C03p64120 Brassica napus HOM05D006127 ORTHO05D007465 3.1e-155 552.7 471 61.6
BolC3t18667H Brassica oleracea HOM05D006127 ORTHO05D007465 3.1e-155 552.7 471 61.6
CDE04G3725 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 4.1e-155 552.4 456 61.4
AUR62031438 Chenopodium quinoa HOM05D006127 ORTHO05D007465 1.2e-154 550.8 466 62.9
Glyma.16G177100 Glycine max HOM05D006127 ORTHO05D007465 8.5e-153 544.7 466 62.0
BcaB02g09667 Brassica carinata HOM05D006127 ORTHO05D007465 1.6e-151 540.4 467 60.4
HanXRQChr15g0494171 Helianthus annuus HOM05D006127 ORTHO05D007465 2.3e-150 536.6 469 59.5
Cpa.g.sc107.127 Carica papaya HOM05D006127 ORTHO05D007465 3.0e-150 536.2 368 72.3
unitig_747.g21859 Utricularia gibba HOM05D006127 ORTHO05D007465 1.2e-149 534.3 475 58.3
SGA_v2.0_scaffold60G21123 Striga asiatica HOM05D006127 ORTHO05D007465 9.8e-149 531.2 458 60.9
Oeu003330.1 Olea europaea HOM05D006127 ORTHO05D007465 2.7e-146 523.1 423 63.1
vmacro06616 Vaccinium macrocarpon HOM05D006127 ORTHO05D007465 5.0e-145 518.8 458 61.4
Hund04798 Selenicereus undatus HOM05D006127 ORTHO05D007465 4.2e-144 515.8 591 50.4
HPP92_008801 Vanilla planifolia HOM05D006127 ORTHO05D007465 1.1e-139 501.1 454 58.4
Rhsim03G0192200 Rhododendron simsii HOM05D006127 ORTHO05D007465 1.4e-139 500.7 553 52.4
Ah.07g206460 Amaranthus hybridus HOM05D006127 ORTHO05D007465 1.6e-138 497.3 461 58.8
Zm00001eb119480 Zea mays HOM05D006127 ORTHO05D007465 2.9e-137 493.0 444 57.0
Ah.13g069260 Amaranthus hybridus HOM05D006127 ORTHO05D007465 1.4e-134 484.2 418 62.2
AUR62021102 Chenopodium quinoa HOM05D006127 ORTHO05D007465 1.7e-132 477.2 465 57.0
TPR.G9177 Trifolium pratense HOM05D006127 ORTHO05D007465 2.2e-132 476.9 287 79.4
Psat0s2186g0040 Pisum sativum HOM05D006127 ORTHO05D007465 6.4e-132 475.3 304 75.7
Nn1g01683 Nelumbo nucifera HOM05D006127 ORTHO05D007465 2.4e-131 473.4 584 50.7
FvH4_7g30450 Fragaria vesca HOM05D006127 ORTHO05D007465 1.6e-130 470.7 300 76.7
Oeu027861.1 Olea europaea HOM05D006127 ORTHO05D007465 4.4e-109 399.4 427 53.2
HPP92_005266 Vanilla planifolia HOM05D006127 ORTHO05D007465 1.0e-105 388.3 380 56.1
VMungo0464G0768 Vigna mungo HOM05D006127 ORTHO05D007465 6.4e-100 369.0 213 81.2
CDE03G0317 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 5.6e-96 355.9 298 61.1
BcaB02g09671 Brassica carinata HOM05D006127 ORTHO05D007465 2.2e-92 344.0 471 45.2
SGA_v2.0_scaffold192G40622 Striga asiatica HOM05D006127 ORTHO05D007465 6.2e-87 325.9 258 64.3
Mapoly0009s0032 Marchantia polymorpha HOM05D006127 ORTHO05D007465 8.7e-73 278.9 492 36.6
FAN01G1207 Fragaria x ananassa HOM05D006127 ORTHO05D007465 3.1e-70 270.4 178 74.7
Os01g0225300 Oryza sativa ssp. japonica HOM05D006127 ORTHO05D007465 2.9e-68 263.8 287 50.5
AagrBONN_evm.TU.Sc2ySwM_368.2100 Anthoceros agrestis HOM05D006127 ORTHO05D007465 2.5e-64 250.8 458 35.8
Pp3c17_22580 Physcomitrium patens HOM05D006127 ORTHO05D007465 9.4e-59 232.3 463 33.3
arahy.Tifrunner.gnm1.ann1.KML1I1 Arachis hypogaea HOM05D006127 ORTHO05D007465 5.0e-44 183.3 255 43.5
Cfa002216 Carpinus fangiana HOM05D006127 ORTHO05D007465 2.9e-36 157.5 248 43.5
SEGI_03634 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 2.5e-35 154.5 217 40.1
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.8e-33 146.4 95 70.5
SMO266G0103 Selaginella moellendorffii HOM05D006127 ORTHO05D007465 8.8e-33 146.0 203 35.5
TPR.G9175 Trifolium pratense HOM05D006127 ORTHO05D007465 6.1e-26 123.2 80 75.0
TPR.G27774 Trifolium pratense HOM05D006127 ORTHO05D007465 2.3e-25 121.3 182 43.4
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 5.0e-20 103.6 62 74.2
SEGI_25179 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 2.0e-16 91.7 83 57.8
Ah.13g069250 Amaranthus hybridus HOM05D006127 ORTHO05D007465 6.4e-15 86.7 60 73.3
Aqoxy1G04253 Aquilegia oxysepala HOM05D006127 ORTHO05D078839 8.3e-07 59.7 49 65.3


User provided reference genes

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