Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 1.2e-161 573.2 298 100.0
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 1.3e-131 473.4 298 81.2
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 2.9e-131 472.2 299 79.9
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 3.7e-131 471.9 299 80.6
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 9.2e-130 467.2 298 79.9
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 1.1e-127 460.3 303 77.6
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 1.6e-126 456.4 300 77.7
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 2.1e-126 456.1 301 77.4
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 4.7e-126 454.9 298 78.2
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 4.7e-126 454.9 298 77.2
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 6.2e-126 454.5 298 77.5
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 1.4e-125 453.4 298 77.9
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 5.2e-125 451.4 300 76.0
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 8.9e-125 450.7 302 75.5
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 2.6e-124 449.1 298 77.2
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 3.4e-124 448.7 302 76.5
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 7.6e-124 447.6 298 76.2
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 7.6e-124 447.6 303 75.2
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 7.6e-124 447.6 298 76.5
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 9.9e-124 447.2 300 76.0
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 9.9e-124 447.2 306 75.5
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 1.7e-123 446.4 300 76.0
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 1.7e-123 446.4 300 76.0
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 1.7e-123 446.4 298 75.2
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 1.7e-123 446.4 298 75.5
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 3.7e-123 445.3 300 75.0
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 3.7e-123 445.3 305 77.0
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 3.7e-123 445.3 305 76.4
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 3.7e-123 445.3 300 75.7
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 3.7e-123 445.3 298 76.2
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 8.4e-123 444.1 296 75.7
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 2.4e-122 442.6 331 71.0
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 2.4e-122 442.6 331 71.0
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 3.2e-122 442.2 300 75.0
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 4.1e-122 441.8 298 76.2
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 1.6e-121 439.9 298 75.2
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 6.0e-121 438.0 314 73.9
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 7.8e-121 437.6 308 73.1
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 1.3e-120 436.8 298 75.5
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 2.5e-119 432.6 312 71.8
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 1.2e-118 430.3 312 71.2
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 2.1e-118 429.5 304 70.4
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 2.8e-118 429.1 298 73.5
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 4.7e-118 428.3 301 73.4
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 6.2e-118 427.9 300 73.0
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 6.2e-118 427.9 309 71.2
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 2.4e-117 426.0 305 73.4
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 2.4e-117 426.0 305 73.4
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 4.0e-117 425.2 302 73.2
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 6.8e-117 424.5 300 73.3
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 8.9e-117 424.1 313 72.8
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 1.2e-116 423.7 306 69.0
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 1.2e-116 423.7 298 71.5
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 2.6e-116 422.5 306 69.0
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 3.4e-116 422.2 306 69.3
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 3.4e-116 422.2 298 72.8
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 4.4e-116 421.8 306 69.6
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 4.4e-116 421.8 306 68.6
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 4.4e-116 421.8 344 65.1
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 5.8e-116 421.4 306 69.3
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 9.9e-116 420.6 312 69.6
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 1.7e-115 419.9 306 68.0
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 2.2e-115 419.5 306 68.6
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 2.2e-115 419.5 306 69.3
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 2.9e-115 419.1 312 70.2
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 3.8e-115 418.7 306 68.6
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 6.4e-115 417.9 305 70.8
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 8.4e-115 417.5 272 75.7
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 1.4e-114 416.8 306 67.6
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 1.4e-114 416.8 304 72.7
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 1.4e-114 416.8 305 70.2
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 2.4e-114 416.0 314 69.4
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 3.2e-114 415.6 288 72.2
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 3.2e-114 415.6 305 70.5
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 3.2e-114 415.6 295 71.5
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 4.2e-114 415.2 307 68.1
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 7.1e-114 414.5 307 69.4
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 1.6e-113 413.3 272 74.6
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 1.6e-113 413.3 269 75.5
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 2.7e-113 412.5 303 72.3
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 6.0e-113 411.4 297 71.4
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 1.1e-111 407.1 335 63.6
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 2.5e-111 406.0 271 73.1
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 9.6e-111 404.1 319 69.0
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 8.1e-110 401.0 288 72.9
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 2.4e-109 399.4 307 67.8
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 4.2e-106 388.7 298 65.8
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 5.4e-106 388.3 290 68.6
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 7.1e-106 387.9 298 70.5
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 4.3e-103 378.6 306 65.0
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 1.1e-101 374.0 316 63.9
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 6.9e-101 371.3 324 63.6
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 5.8e-100 368.2 312 62.5
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 2.4e-98 362.8 338 59.5
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 1.6e-97 360.1 320 61.2
Hma1.2p1_0415F.1_g148020 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.0e-91 340.9 223 77.6
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 3.2e-90 335.9 272 64.3
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 1.6e-86 323.6 272 61.4
Eucgr.K00407 Eucalyptus grandis HOM05D006582 ORTHO05D008313 1.7e-83 313.5 233 69.5
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 1.1e-82 310.8 274 60.9
MD01G1064500 Malus domestica HOM05D006582 ORTHO05D008313 6.7e-80 301.6 201 77.1
MD01G1063600 Malus domestica HOM05D006582 ORTHO05D008313 3.3e-79 299.3 254 63.0
Gohir.A08G102500 Gossypium hirsutum HOM05D006582 ORTHO05D008313 4.3e-79 298.9 237 65.0
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 1.6e-73 280.4 298 51.7
Potri.015G029300 Populus trichocarpa HOM05D006582 ORTHO05D008313 2.8e-70 269.6 209 68.9
Os10g0520900 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 1.6e-65 253.8 265 49.8
Zm00001eb021230 Zea mays HOM05D006582 ORTHO05D008313 1.0e-56 224.6 285 42.8
Cpa.g.sc3.116 Carica papaya HOM05D006582 ORTHO05D008313 2.0e-55 220.3 192 64.1
Mapoly0081s0017 Marchantia polymorpha HOM05D006582 ORTHO05D008313 6.3e-54 215.3 312 42.0
SMO356G0114 Selaginella moellendorffii HOM05D001613 ORTHO05D001556 4.2e-50 202.6 296 39.5
PGSC0003DMG401018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 4.7e-49 199.1 155 70.3
Pp3c14_24810 Physcomitrium patens HOM05D006582 ORTHO05D008313 6.5e-43 178.7 244 41.8
AagrBONN_evm.TU.Sc2ySwM_228.4673 Anthoceros agrestis HOM05D006582 ORTHO05D008313 8.5e-43 178.3 235 42.6
Hma1.2p1_0512F.1_g169380 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 9.8e-39 164.9 293 43.0
CiPaw.05G199600 Carya illinoinensis HOM05D006582 ORTHO05D008313 2.3e-35 153.7 116 69.0
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 3.7e-30 136.3 222 38.3
Hma1.2p1_0415F.1_g148000 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 9.5e-26 121.7 88 73.9
SHI19113 Sapria himalayana HOM05D006582 ORTHO05D008313 1.0e-19 101.7 74 67.6
SHI19111 Sapria himalayana HOM05D006582 ORTHO05D008313 2.8e-17 93.6 106 47.2
SEGI_26283 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 2.3e-16 90.5 81 59.3
Rhsim03G0115100 Rhododendron simsii HOM05D006582 ORTHO05D023108 8.9e-16 88.6 135 41.5
MD07G1135700 Malus domestica HOM05D006582 ORTHO05D008313 1.1e-10 71.6 79 53.2
SEGI_35321 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 1.4e-08 64.7 60 45.0


User provided reference genes

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