Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0522 Trochodendron aralioides HOM05D003570 ORTHO05D004207 2.7e-55 218.4 107 100.0
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 1.7e-41 172.6 104 80.8
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 1.2e-36 156.4 104 74.0
Aqoxy5G03688 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 2.2e-33 145.6 104 65.4
Aqoxy7G03799 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 6.4e-33 144.1 104 64.4
Lj3A151T25 Lonicera japonica HOM05D003570 ORTHO05D004207 4.6e-31 137.9 100 66.0
PSO754G0035 Papaver somniferum HOM05D003570 ORTHO05D004207 4.6e-31 137.9 98 63.3
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 6.0e-31 137.5 106 67.0
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 6.0e-31 137.5 98 63.3
PSO063G1535 Papaver somniferum HOM05D003570 ORTHO05D004207 7.8e-31 137.1 98 64.3
Lj6A815G40 Lonicera japonica HOM05D003570 ORTHO05D004207 1.0e-30 136.7 100 65.0
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 1.0e-30 136.7 98 63.3
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 1.7e-30 136.0 100 66.0
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 6.6e-30 134.0 100 66.0
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 6.6e-30 134.0 104 65.4
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 1.9e-29 132.5 100 64.0
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 3.3e-29 131.7 100 66.0
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 5.6e-29 131.0 103 60.2
Dinv15203 Davidia involucrata HOM05D003570 ORTHO05D004207 7.3e-29 130.6 101 64.4
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 1.3e-28 129.8 92 67.4
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 2.8e-28 128.6 100 62.0
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 2.8e-28 128.6 100 62.0
Nitab4.5_0001978g0070 Nicotiana tabacum HOM05D003570 ORTHO05D004207 3.6e-28 128.3 100 61.0
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 6.2e-28 127.5 100 66.0
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 8.1e-28 127.1 100 63.0
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 1.1e-27 126.7 102 61.8
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 4.0e-27 124.8 92 65.2
PGSC0003DMG400016968 Solanum tuberosum HOM05D003570 ORTHO05D004207 4.0e-27 124.8 92 65.2
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 5.3e-27 124.4 92 59.8
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 6.9e-27 124.0 106 60.4
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 9.0e-27 123.6 100 61.0
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 9.0e-27 123.6 100 61.0
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 1.2e-26 123.2 102 58.8
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.0e-26 122.5 96 61.5
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.0e-26 122.5 96 61.5
Hma1.2p1_1533F.1_g289360 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 2.0e-26 122.5 101 58.4
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 3.4e-26 121.7 100 65.0
ECA233G5166 Erigeron canadensis HOM05D002671 ORTHO05D002985 3.4e-26 121.7 101 57.4
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 3.4e-26 121.7 96 64.6
EL10As2g23162 Beta vulgaris HOM05D003570 ORTHO05D004207 4.5e-26 121.3 96 62.5
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 4.5e-26 121.3 101 60.4
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 4.5e-26 121.3 98 64.3
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 4.5e-26 121.3 96 60.4
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 4.5e-26 121.3 96 60.4
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 4.5e-26 121.3 100 60.0
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 7.6e-26 120.6 96 62.5
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 9.9e-26 120.2 101 62.4
Aqoxy1G03220 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 1.3e-25 119.8 96 59.4
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 1.3e-25 119.8 92 63.0
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 1.7e-25 119.4 100 61.0
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.7e-25 119.4 96 60.4
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 1.7e-25 119.4 97 61.9
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 1.7e-25 119.4 96 59.4
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 4.9e-25 117.9 92 65.2
MD13G1104500 Malus domestica HOM05D003570 ORTHO05D004207 6.4e-25 117.5 100 61.0
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 1.1e-24 116.7 99 59.6
Rhsim12G0108000 Rhododendron simsii HOM05D003570 ORTHO05D004207 1.1e-24 116.7 99 60.6
PSO063G3251 Papaver somniferum HOM05D003570 ORTHO05D004207 1.4e-24 116.3 98 56.1
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 1.9e-24 115.9 98 61.2
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 1.9e-24 115.9 94 61.7
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 2.4e-24 115.5 82 67.1
vmacro16171 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 3.2e-24 115.2 99 59.6
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 4.2e-24 114.8 97 61.9
AUR62005511 Chenopodium quinoa HOM05D003570 ORTHO05D004207 4.2e-24 114.8 100 61.0
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 5.4e-24 114.4 100 61.0
Sabra08G0139700 Salix brachista HOM05D003570 ORTHO05D004207 5.4e-24 114.4 92 64.1
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 1.2e-23 113.2 97 60.8
Sed0006332 Sechium edule HOM05D003570 ORTHO05D004207 1.2e-23 113.2 98 57.1
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 2.1e-23 112.5 82 62.2
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 2.7e-23 112.1 100 55.0
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 3.5e-23 111.7 92 60.9
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 6.0e-23 110.9 93 61.3
vmacro16173 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 7.9e-23 110.5 99 59.6
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 1.3e-22 109.8 82 61.0
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 1.8e-22 109.4 97 54.6
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 3.9e-22 108.2 92 57.6
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 1.5e-21 106.3 92 53.3
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 3.3e-21 105.1 92 55.4
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 4.3e-21 104.8 94 56.4
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 5.6e-21 104.4 92 56.5
Glyma.18G013000 Glycine max HOM05D003570 ORTHO05D004207 7.4e-21 104.0 81 60.5
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 1.3e-20 103.2 82 61.0
Oeu038646.1 Olea europaea HOM05D003570 ORTHO05D004207 1.6e-20 102.8 94 55.3
ATR0824G009 Amborella trichopoda HOM05D003570 ORTHO05D004207 2.1e-20 102.4 86 57.0
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 2.4e-19 99.0 99 51.5
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 5.3e-19 97.8 92 54.3
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 1.2e-18 96.7 100 56.0
vmacro17618 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.5e-18 96.3 93 54.8
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 2.0e-18 95.9 93 52.7
CDE06G1553 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 3.4e-18 95.1 92 53.3
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 3.4e-18 95.1 97 49.5
SEGI_05718 Sequoiadendron giganteum HOM05D003570 ORTHO05D004207 1.9e-16 89.4 82 52.4
SHI04269 Sapria himalayana HOM05D003570 ORTHO05D004207 4.2e-16 88.2 92 50.0
FAN08G3485 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.2e-15 86.7 96 50.0
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 2.1e-15 85.9 87 54.0
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 2.1e-15 85.9 102 46.1
Zm00001eb212370 Zea mays HOM05D003570 ORTHO05D004207 2.1e-15 85.9 92 48.9
Zm00001eb062020 Zea mays HOM05D003570 ORTHO05D004207 3.5e-15 85.1 92 48.9
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 7.9e-15 84.0 102 45.1
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 7.9e-15 84.0 102 45.1
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 3.9e-14 81.6 90 44.4
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 6.7e-14 80.9 72 54.2
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 6.7e-14 80.9 93 45.2
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 6.7e-14 80.9 93 45.2
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 6.7e-14 80.9 93 45.2
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 6.7e-14 80.9 93 45.2
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 6.7e-14 80.9 93 45.2
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 1.9e-13 79.3 102 46.1
Haze_11814 Corylus avellana HOM05D001314 ORTHO05D001165 1.9e-13 79.3 93 48.4
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 1.9e-13 79.3 93 44.1
Os02g0596100 Oryza sativa ssp. japonica HOM05D003570 ORTHO05D004207 4.3e-13 78.2 92 45.7
MCO05G059 Micromonas commoda HOM05D003570 ORTHO05D004207 7.4e-13 77.4 82 41.5
Actinidia15111 Actinidia chinensis HOM05D003570 ORTHO05D004207 9.6e-13 77.0 70 57.1
Pp3c9_21420 Physcomitrium patens HOM05D003570 ORTHO05D004207 9.6e-13 77.0 82 43.9
Mapoly0004s0250 Marchantia polymorpha HOM05D003570 ORTHO05D004207 3.7e-12 75.1 82 39.0
CBR_g38118 Chara braunii HOM05D003570 ORTHO05D004207 4.8e-12 74.7 95 40.0
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 8.2e-12 73.9 103 43.7
Thhalv10001133m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 2.4e-11 72.4 96 41.7
unitig_22.g6426 Utricularia gibba HOM05D003570 ORTHO05D004207 3.1e-11 72.0 91 41.8
Cre06.g300900 Chlamydomonas reinhardtii HOM05D003570 ORTHO05D004207 1.0e-09 67.0 84 40.5
AagrBONN_evm.TU.Sc2ySwM_362.2178 Anthoceros agrestis HOM05D003570 ORTHO05D004207 4.9e-09 64.7 82 39.0
Medtr7g034350 Medicago truncatula HOM05D003570 ORTHO05D004207 3.2e-08 62.0 72 48.6


User provided reference genes

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