Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0487 Trochodendron aralioides HOM05D007835 ORTHO05D008482 1.2e-52 209.5 106 100.0
GSVIVG01033066001 Vitis vinifera HOM05D007835 ORTHO05D008482 6.4e-25 117.5 110 61.8
TAR371G0995 Trochodendron aralioides HOM05D007835 ORTHO05D008482 2.0e-23 112.5 102 60.8
TAR629G3113 Trochodendron aralioides HOM05D007835 ORTHO05D008482 2.5e-21 105.5 109 58.7
Aqoxy5G03319 Aquilegia oxysepala HOM05D007835 ORTHO05D008482 2.1e-20 102.4 115 51.3
Duzib147G1374 Durio zibethinus HOM05D007835 ORTHO05D008482 3.1e-19 98.6 111 55.9
QL02p071044 Quercus lobata HOM05D007835 ORTHO05D008482 8.9e-19 97.1 114 54.4
Thecc.04G039400 Theobroma cacao HOM05D007835 ORTHO05D008482 1.5e-18 96.3 112 50.9
CiPaw.03G057300 Carya illinoinensis HOM05D007835 ORTHO05D008482 5.8e-18 94.4 114 55.3
Gohir.A07G229800 Gossypium hirsutum HOM05D007835 ORTHO05D008482 3.7e-17 91.7 115 47.0
MBI11_g22690_MAGBIO Magnolia biondii HOM05D007835 ORTHO05D008482 4.9e-17 91.3 108 50.9
TAR622G1408 Trochodendron aralioides HOM05D007835 ORTHO05D008482 1.1e-16 90.1 103 49.5
Gohir.D07G237000 Gossypium hirsutum HOM05D007835 ORTHO05D008482 1.4e-16 89.7 110 47.3
Gorai.001G272900 Gossypium raimondii HOM05D007835 ORTHO05D008482 1.4e-16 89.7 110 47.3
Potri.001G328300 Populus trichocarpa HOM05D007835 ORTHO05D008482 2.4e-16 89.0 114 48.2
Manes.17G102100 Manihot esculenta HOM05D007835 ORTHO05D008482 4.1e-16 88.2 119 48.7
Sabra17G0058300 Salix brachista HOM05D007835 ORTHO05D008482 4.1e-16 88.2 113 50.4
Gohir.A05G337200 Gossypium hirsutum HOM05D007835 ORTHO05D008482 1.2e-15 86.7 113 46.9
Potri.017G065916 Populus trichocarpa HOM05D007835 ORTHO05D008482 1.2e-15 86.7 111 49.5
COL.COLO4_13280 Corchorus olitorius HOM05D007835 ORTHO05D008482 1.6e-15 86.3 112 49.1
PGR142G0702 Punica granatum HOM05D007835 ORTHO05D008482 2.7e-15 85.5 108 48.1
Dinv33326 Davidia involucrata HOM05D007835 ORTHO05D008482 3.5e-15 85.1 115 47.8
Gohir.D04G075900 Gossypium hirsutum HOM05D007835 ORTHO05D008482 6.0e-15 84.3 113 46.0
ATR0561G259 Amborella trichopoda HOM05D007835 ORTHO05D008482 7.8e-15 84.0 116 45.7
Gorai.012G085600 Gossypium raimondii HOM05D007835 ORTHO05D008482 7.8e-15 84.0 113 46.0
Prupe.3G308000 Prunus persica HOM05D007835 ORTHO05D008482 1.0e-14 83.6 120 47.5
Cfa007213 Carpinus fangiana HOM05D007835 ORTHO05D008482 1.3e-14 83.2 109 51.4
Eucgr.I01635 Eucalyptus grandis HOM05D007835 ORTHO05D008482 1.7e-14 82.8 115 46.1
Atru.chr6.2588 Acer truncatum HOM05D007835 ORTHO05D008482 3.0e-14 82.0 124 50.8
Gohir.1Z049371 Gossypium hirsutum HOM05D007835 ORTHO05D008482 3.0e-14 82.0 113 46.0
Gohir.A09G036865 Gossypium hirsutum HOM05D007835 ORTHO05D008482 3.0e-14 82.0 113 46.0
Gohir.A09G036900 Gossypium hirsutum HOM05D007835 ORTHO05D008482 3.0e-14 82.0 113 46.0
Gorai.006G043500 Gossypium raimondii HOM05D007835 ORTHO05D008482 3.9e-14 81.6 113 46.0
CiPaw.04G038800 Carya illinoinensis HOM05D007835 ORTHO05D008482 6.6e-14 80.9 123 43.1
Gohir.D09G038100 Gossypium hirsutum HOM05D007835 ORTHO05D008482 1.1e-13 80.1 113 45.1
Nn3g16421 Nelumbo nucifera HOM05D007835 ORTHO05D008482 1.1e-13 80.1 117 46.2
Actinidia05895 Actinidia chinensis HOM05D007835 ORTHO05D008482 1.9e-13 79.3 113 46.0
Sabra16G0210200 Salix brachista HOM05D007835 ORTHO05D008482 1.9e-13 79.3 113 42.5
Ciclev10017736m.g Citrus clementina HOM05D007835 ORTHO05D008482 9.5e-13 77.0 120 44.2
Potri.003G169500 Populus trichocarpa HOM05D019467 ORTHO05D008482 2.1e-12 75.9 109 43.1
Eucgr.I01634 Eucalyptus grandis HOM05D007835 ORTHO05D008482 2.8e-12 75.5 115 46.1
Ah.02g119850 Amaranthus hybridus HOM05D007835 ORTHO05D008482 3.6e-12 75.1 114 40.4
MBI07_g11278_MAGBIO Magnolia biondii HOM05D007835 ORTHO05D008482 3.6e-12 75.1 103 48.5
Sabra01G0042000 Salix brachista HOM05D019467 ORTHO05D008482 3.6e-12 75.1 102 45.1
CANSAT64G0845 Cannabis sativa HOM05D007835 ORTHO05D008482 1.4e-11 73.2 136 36.8
QL08p045526 Quercus lobata HOM05D007835 ORTHO05D008482 1.8e-11 72.8 107 44.9
Sabra03G0124200 Salix brachista HOM05D019467 ORTHO05D008482 3.1e-11 72.0 102 44.1
Haze_14890 Corylus avellana HOM05D007835 ORTHO05D008482 6.8e-11 70.9 88 53.4
Aqoxy3G01587 Aquilegia oxysepala HOM05D007835 ORTHO05D008482 1.2e-10 70.1 108 41.7
AUR62003426 Chenopodium quinoa HOM05D007835 ORTHO05D008482 1.5e-10 69.7 113 39.8
AUR62029415 Chenopodium quinoa HOM05D007835 ORTHO05D008482 2.6e-10 68.9 105 41.0
Manes.13G009500 Manihot esculenta HOM05D019467 ORTHO05D008482 4.4e-10 68.2 125 39.2
RcHm_v2.0_Chr2g0175871 Rosa chinensis HOM05D007835 ORTHO05D008482 1.3e-09 66.6 143 39.2
TWI60G0136 Tripterygium wilfordii HOM05D007835 ORTHO05D008482 1.3e-09 66.6 116 40.5
Nitab4.5_0002050g0020 Nicotiana tabacum HOM05D011578 ORTHO05D008482 1.7e-09 66.2 158 37.3
Actinidia36209 Actinidia chinensis HOM05D007835 ORTHO05D008482 2.9e-09 65.5 109 43.1
Cfa009380 Carpinus fangiana HOM05D007835 ORTHO05D043682 1.1e-08 63.5 117 40.2
TWI34G1201 Tripterygium wilfordii HOM05D007835 ORTHO05D008482 1.4e-08 63.2 116 43.1
FAN09G2005 Fragaria x ananassa HOM05D007835 ORTHO05D008482 1.9e-08 62.8 135 39.3
DCAR_021801 Daucus carota HOM05D007835 ORTHO05D008482 2.4e-08 62.4 125 38.4
FvH4_6g53750 Fragaria vesca HOM05D007835 ORTHO05D008482 3.2e-08 62.0 135 37.8
FAN05G3731 Fragaria x ananassa HOM05D007835 ORTHO05D008482 3.2e-08 62.0 135 37.8
FAN14G4618 Fragaria x ananassa HOM05D007835 ORTHO05D008482 3.2e-08 62.0 135 37.8
Medtr7g028780 Medicago truncatula HOM05D007835 ORTHO05D008482 5.4e-08 61.2 107 39.3
HPP92_003565 Vanilla planifolia HOM05D007835 ORTHO05D008482 5.4e-08 61.2 114 38.6
Phvul.001G092000 Phaseolus vulgaris HOM05D007835 ORTHO05D008482 7.1e-08 60.8 102 38.2
QL03p051946 Quercus lobata HOM05D023380 ORTHO05D008482 9.2e-08 60.5 118 37.3
FAN02G2327 Fragaria x ananassa HOM05D007835 ORTHO05D008482 1.2e-07 60.1 135 39.3
Peaxi162Scf00420g00521 Petunia axillaris HOM05D011578 ORTHO05D008482 1.6e-07 59.7 164 32.9
Nitab4.5_0007375g0010 Nicotiana tabacum HOM05D011578 ORTHO05D008482 2.7e-07 58.9 161 34.8
VMungo1383G1738 Vigna mungo HOM05D007835 ORTHO05D008482 2.7e-07 58.9 107 38.3
Gohir.D02G147100 Gossypium hirsutum HOM05D013974 ORTHO05D016196 3.5e-07 58.5 116 36.2
Gorai.005G164700 Gossypium raimondii HOM05D013974 ORTHO05D016196 3.5e-07 58.5 116 36.2
Gohir.A03G124800 Gossypium hirsutum HOM05D013974 ORTHO05D016196 4.6e-07 58.2 116 36.2
Manes.12G009100 Manihot esculenta HOM05D019467 ORTHO05D008482 1.0e-06 57.0 85 42.4
Potri.001G058500 Populus trichocarpa HOM05D019467 ORTHO05D008482 1.0e-06 57.0 103 38.8
Lj1g0016807 Lotus japonicus HOM05D007835 ORTHO05D008482 1.3e-06 56.6 109 44.0
Lsat_1_v5_gn_0_2801 Lactuca sativa HOM05D007835 ORTHO05D008482 5.1e-06 54.7 118 35.6


User provided reference genes

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