Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0443 Trochodendron aralioides HOM05D007623 ORTHO05D009641 8.6e-72 275.8 132 100.0
Aqoxy1G01216 Aquilegia oxysepala HOM05D007623 ORTHO05D009641 1.3e-46 192.2 126 71.4
GSVIVG01010112001 Vitis vinifera HOM05D007623 ORTHO05D009641 4.8e-46 190.3 120 72.5
Nn1g03057 Nelumbo nucifera HOM05D007623 ORTHO05D009641 6.9e-45 186.4 132 68.2
CSS0048304 Camellia sinensis var. sinensis HOM05D007623 ORTHO05D009641 2.0e-44 184.9 125 68.0
Dinv34009 Davidia involucrata HOM05D007623 ORTHO05D009641 4.5e-44 183.7 121 67.8
Actinidia24041 Actinidia chinensis HOM05D007623 ORTHO05D009641 5.8e-44 183.3 125 65.6
CSS0034887 Camellia sinensis var. sinensis HOM05D007623 ORTHO05D009641 1.0e-43 182.6 123 68.3
Lj6A773T130 Lonicera japonica HOM05D007623 ORTHO05D009641 4.9e-43 180.3 125 66.4
Manes.14G091100 Manihot esculenta HOM05D007623 ORTHO05D009641 1.9e-42 178.3 125 64.8
Cfa008839 Carpinus fangiana HOM05D007623 ORTHO05D009641 2.5e-42 177.9 125 64.8
COL.COLO4_27779 Corchorus olitorius HOM05D007623 ORTHO05D009641 2.5e-42 177.9 125 64.8
Atru.chr11.1545 Acer truncatum HOM05D007623 ORTHO05D009641 3.2e-42 177.6 125 63.2
Actinidia31923 Actinidia chinensis HOM05D007623 ORTHO05D009641 4.2e-42 177.2 123 65.0
Hund25149 Selenicereus undatus HOM05D007623 ORTHO05D009641 7.1e-42 176.4 126 62.7
Haze_11851 Corylus avellana HOM05D007623 ORTHO05D009641 9.3e-42 176.0 125 64.0
Thecc.02G321100 Theobroma cacao HOM05D007623 ORTHO05D009641 1.3e-40 172.2 123 63.4
Sabra10G0105800 Salix brachista HOM05D007623 ORTHO05D009641 3.0e-40 171.0 124 61.3
Ciclev10031004m.g Citrus clementina HOM05D007623 ORTHO05D009641 3.9e-40 170.6 124 59.7
MELO3C026661.2 Cucumis melo HOM05D007623 ORTHO05D009641 1.5e-39 168.7 127 59.8
Sed0026487 Sechium edule HOM05D007623 ORTHO05D009641 1.5e-39 168.7 127 59.1
CiPaw.06G095500 Carya illinoinensis HOM05D007623 ORTHO05D009641 2.5e-39 167.9 126 57.9
RcHm_v2.0_Chr4g0437181 Rosa chinensis HOM05D007623 ORTHO05D009641 3.3e-39 167.5 126 59.5
FAN17G1802 Fragaria x ananassa HOM05D007623 ORTHO05D009641 9.6e-39 166.0 125 57.6
CsaV3_3G030580 Cucumis sativus L. HOM05D007623 ORTHO05D009641 1.6e-38 165.2 127 58.3
ClCG05G023480 Citrullus lanatus HOM05D007623 ORTHO05D009641 2.8e-38 164.5 127 59.1
Peaxi162Scf00188g01015 Petunia axillaris HOM05D007623 ORTHO05D009641 4.8e-38 163.7 122 61.5
Gohir.A03G106900 Gossypium hirsutum HOM05D007623 ORTHO05D009641 6.3e-38 163.3 118 62.7
Gohir.D02G132000 Gossypium hirsutum HOM05D007623 ORTHO05D009641 6.3e-38 163.3 118 62.7
Gorai.005G147900 Gossypium raimondii HOM05D007623 ORTHO05D009641 6.3e-38 163.3 118 62.7
FvH4_4g29120 Fragaria vesca HOM05D007623 ORTHO05D009641 1.4e-37 162.2 122 58.2
FAN22G0497 Fragaria x ananassa HOM05D007623 ORTHO05D009641 5.3e-37 160.2 122 57.4
CANSAT64G0130 Cannabis sativa HOM05D007623 ORTHO05D009641 6.9e-37 159.8 122 59.0
Sopen00g002400 Solanum pennellii HOM05D007623 ORTHO05D009641 6.9e-37 159.8 123 58.5
Nitab4.5_0000259g0170 Nicotiana tabacum HOM05D007623 ORTHO05D009641 1.2e-36 159.1 125 60.0
FAN12G1349 Fragaria x ananassa HOM05D007623 ORTHO05D009641 1.5e-36 158.7 121 57.0
Nitab4.5_0011373g0020 Nicotiana tabacum HOM05D007623 ORTHO05D009641 2.0e-36 158.3 119 61.3
PGSC0003DMG400019642 Solanum tuberosum HOM05D007623 ORTHO05D009641 4.5e-36 157.1 119 59.7
vmacro01293 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 1.0e-35 156.0 119 58.8
Prupe.2G062100 Prunus persica HOM05D007623 ORTHO05D009641 6.5e-35 153.3 123 59.3
MD16G1054700 Malus domestica HOM05D007623 ORTHO05D009641 4.2e-34 150.6 115 58.3
HanXRQChr08g0215011 Helianthus annuus HOM05D007623 ORTHO05D009641 1.3e-32 145.6 126 54.0
SHI04831 Sapria himalayana HOM05D007623 ORTHO05D009641 3.9e-32 144.1 110 57.3
Lsat_1_v5_gn_6_31920 Lactuca sativa HOM05D007623 ORTHO05D009641 6.7e-32 143.3 124 50.8
Sc11g0002680 Simmondsia chinensis HOM05D007623 ORTHO05D009641 6.7e-32 143.3 98 63.3
ECA233G1899 Erigeron canadensis HOM05D000630 ORTHO05D001413 8.7e-32 142.9 126 53.2
DCAR_023738 Daucus carota HOM05D007623 ORTHO05D009641 1.6e-30 138.7 125 52.8
Zm00001eb045730 Zea mays HOM05D007623 ORTHO05D009641 2.8e-30 137.9 126 52.4
MD13G1055600 Malus domestica HOM05D007623 ORTHO05D009641 3.1e-29 134.4 111 55.0
Prupe.7G020300 Prunus persica HOM05D007623 ORTHO05D009641 2.6e-28 131.3 109 57.8
AL1G25410 Arabidopsis lyrata HOM05D007623 ORTHO05D009641 2.2e-27 128.3 119 47.9
Aa31LG7G1940 Aethionema arabicum HOM05D007623 ORTHO05D009641 3.2e-26 124.4 126 42.9
EL10Ac6g14659 Beta vulgaris HOM05D007623 ORTHO05D009641 3.2e-26 124.4 96 62.5
Oeu019601.2 Olea europaea HOM05D007623 ORTHO05D009641 7.2e-26 123.2 96 58.3
BcaB08g34697 Brassica carinata HOM05D007623 ORTHO05D009641 4.6e-25 120.6 129 45.7
CARHR013990 Cardamine hirsuta HOM05D007623 ORTHO05D009641 4.6e-25 120.6 115 46.1
AUR62007860 Chenopodium quinoa HOM05D007623 ORTHO05D009641 1.0e-24 119.4 97 58.8
Thhalv10009738m.g Eutrema salsugineum HOM05D007623 ORTHO05D009641 1.0e-24 119.4 121 44.6
Rhsim12G0070700 Rhododendron simsii HOM05D007623 ORTHO05D009641 8.8e-24 116.3 83 62.7
Cc11_g11460 Coffea canephora HOM05D007623 ORTHO05D009641 7.4e-23 113.2 97 55.7
AUR62003048 Chenopodium quinoa HOM05D007623 ORTHO05D009641 1.3e-22 112.5 97 55.7
HPP92_001379 Vanilla planifolia HOM05D007623 ORTHO05D009641 3.7e-22 110.9 100 51.0
CAN.G680.12 Capsicum annuum HOM05D007623 ORTHO05D009641 4.8e-22 110.5 83 59.0
Ah.03g137460 Amaranthus hybridus HOM05D007623 ORTHO05D009641 1.7e-19 102.1 84 56.0
Migut.E00256 Erythranthe guttata HOM05D007623 ORTHO05D009641 3.8e-19 100.9 97 47.4
Sp1g12290 Schrenkiella parvula HOM05D007623 ORTHO05D009641 3.8e-19 100.9 97 46.4
THA.LOC104805220 Tarenaya hassleriana HOM05D007623 ORTHO05D009641 3.8e-19 100.9 96 43.8
BcaB06g28282 Brassica carinata HOM05D007623 ORTHO05D009641 7.2e-18 96.7 126 39.7
A06p09730 Brassica napus HOM05D007623 ORTHO05D009641 1.2e-17 95.9 99 41.4
BraA06t24162Z Brassica rapa HOM05D007623 ORTHO05D009641 1.2e-17 95.9 99 41.4
AT1G13630 Arabidopsis thaliana HOM05D007623 ORTHO05D009641 1.0e-16 92.8 93 44.1
Carub.0001s1335 Capsella rubella HOM05D007623 ORTHO05D009641 1.0e-16 92.8 94 42.6
BcaC05g25269 Brassica carinata HOM05D007623 ORTHO05D009641 1.4e-16 92.4 95 42.1
C05p11430 Brassica napus HOM05D007623 ORTHO05D009641 1.4e-16 92.4 95 42.1
BolC5t29896H Brassica oleracea HOM05D007623 ORTHO05D009641 1.4e-16 92.4 95 42.1
BcaB02g06459 Brassica carinata HOM05D007623 ORTHO05D009641 2.3e-16 91.7 94 42.6
ATR0048G027 Amborella trichopoda HOM05D007623 ORTHO05D009641 3.0e-16 91.3 87 51.7
SGA_v2.0_scaffold287G47196 Striga asiatica HOM05D007623 ORTHO05D009641 8.8e-16 89.7 83 43.4
PSO832G0129 Papaver somniferum HOM05D007570 ORTHO05D009365 2.7e-09 68.2 118 32.2
PSO210G6895 Papaver somniferum HOM05D007570 ORTHO05D009365 1.4e-08 65.9 115 33.0
Nn1g03517 Nelumbo nucifera HOM05D002890 ORTHO05D009847 7.5e-07 60.1 114 27.2
Zm00001eb315460 Zea mays HOM05D003689 ORTHO05D003950 7.5e-07 60.1 123 30.1
SEGI_39043 Sequoiadendron giganteum HOM05D007623 ORTHO05D009641 9.7e-07 59.7 78 38.5
Lsat_1_v5_gn_3_22340 Lactuca sativa HOM05D007623 ORTHO05D009641 4.8e-06 57.4 43 58.1
Solyc01g099530.3 Solanum lycopersicum HOM05D001281 ORTHO05D001139 6.3e-06 57.0 114 28.1
Nn5g30586 Nelumbo nucifera HOM05D005287 ORTHO05D006893 8.2e-06 56.6 127 28.3
Sabra19G0053700 Salix brachista HOM05D007570 ORTHO05D009365 8.2e-06 56.6 110 26.4


User provided reference genes

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