Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0212 Trochodendron aralioides HOM05D000247 ORTHO05D415923 1.6e-49 199.1 99 100.0
TAR623G0637 Trochodendron aralioides HOM05D000247 ORTHO05D000288 1.4e-13 79.7 45 88.9
TAR636G0702 Trochodendron aralioides HOM05D000247 ORTHO05D000288 1.2e-12 76.6 49 75.5
GSVIVG01025873001 Vitis vinifera HOM05D000247 ORTHO05D000288 4.4e-12 74.7 49 67.3
TWI77G0033 Tripterygium wilfordii HOM05D000247 ORTHO05D000288 7.5e-12 73.9 49 67.3
TWI53G1722 Tripterygium wilfordii HOM05D000247 ORTHO05D000288 4.9e-11 71.2 50 68.0
Dinv16959 Davidia involucrata HOM05D000247 ORTHO05D000288 1.4e-10 69.7 49 65.3
Sc07g0005970 Simmondsia chinensis HOM05D000247 ORTHO05D000288 1.9e-10 69.3 49 61.2
SalBow5G1791 Salvia bowleyana HOM05D000247 ORTHO05D000288 3.2e-10 68.6 49 61.2
SalBow5G2540 Salvia bowleyana HOM05D000247 ORTHO05D000288 3.2e-10 68.6 49 61.2
Atru.chr8.82 Acer truncatum HOM05D000247 ORTHO05D000288 4.1e-10 68.2 49 65.3
Actinidia29022 Actinidia chinensis HOM05D000247 ORTHO05D000288 4.1e-10 68.2 49 65.3
CSS0013728 Camellia sinensis var. sinensis HOM05D000247 ORTHO05D000288 4.1e-10 68.2 49 65.3
MSTRG.18933 Avicennia marina HOM05D000247 ORTHO05D000288 5.4e-10 67.8 49 63.3
Actinidia11496 Actinidia chinensis HOM05D000247 ORTHO05D000288 1.2e-09 66.6 49 65.3
Potri.016G138800 Populus trichocarpa HOM05D000247 ORTHO05D000288 1.2e-09 66.6 49 61.2
Hma1.2p1_0174F.1_g076730 Hydrangea macrophylla HOM05D000247 ORTHO05D000288 1.6e-09 66.2 49 63.3
MSTRG.5484 Avicennia marina HOM05D000247 ORTHO05D000288 2.1e-09 65.9 49 61.2
TWI74G0617 Tripterygium wilfordii HOM05D000247 ORTHO05D000288 2.1e-09 65.9 49 65.3
CSS0021210 Camellia sinensis var. sinensis HOM05D000247 ORTHO05D000288 2.7e-09 65.5 49 63.3
Migut.J00022 Erythranthe guttata HOM05D000247 ORTHO05D000288 2.7e-09 65.5 49 63.3
Potri.006G110100 Populus trichocarpa HOM05D000247 ORTHO05D000288 2.7e-09 65.5 49 61.2
QL07p031740 Quercus lobata HOM05D000247 ORTHO05D000288 2.7e-09 65.5 49 61.2
BcaB04g18573 Brassica carinata HOM05D000247 ORTHO05D000288 3.5e-09 65.1 49 63.3
HanXRQChr12g0367921 Helianthus annuus HOM05D000247 ORTHO05D000288 7.8e-09 63.9 49 53.1
BcaC01g04194 Brassica carinata HOM05D000247 ORTHO05D000288 1.0e-08 63.5 49 59.2
C03p43990 Brassica napus HOM05D000050 ORTHO05D000288 1.0e-08 63.5 49 59.2
BolC3t16670H Brassica oleracea HOM05D000247 ORTHO05D000288 1.0e-08 63.5 49 59.2
CARHR083010 Cardamine hirsuta HOM05D000247 ORTHO05D000288 1.0e-08 63.5 49 59.2
Dinv25358 Davidia involucrata HOM05D000050 ORTHO05D000288 1.0e-08 63.5 49 59.2
A03p36400 Brassica napus HOM05D000050 ORTHO05D000288 1.3e-08 63.2 49 59.2
BraA03t12808Z Brassica rapa HOM05D000050 ORTHO05D000288 1.3e-08 63.2 49 59.2
CiPaw.09G222700 Carya illinoinensis HOM05D000247 ORTHO05D000288 1.3e-08 63.2 49 61.2
Eucgr.K01294 Eucalyptus grandis HOM05D000247 ORTHO05D000288 1.3e-08 63.2 49 57.1
Thhalv10021725m.g Eutrema salsugineum HOM05D000247 ORTHO05D000288 1.3e-08 63.2 49 59.2
MBI15_g32288_MAGBIO Magnolia biondii HOM05D000247 ORTHO05D000288 1.3e-08 63.2 49 57.1
BcaC09g47987 Brassica carinata HOM05D000247 ORTHO05D000288 1.7e-08 62.8 49 59.2
TPR.G24328 Trifolium pratense HOM05D000247 ORTHO05D000288 3.0e-08 62.0 50 62.0
Sp3g07140 Schrenkiella parvula HOM05D000247 ORTHO05D000288 3.9e-08 61.6 49 59.2
THA.LOC104823326 Tarenaya hassleriana HOM05D000247 ORTHO05D000288 3.9e-08 61.6 49 59.2
BcaC05g29606 Brassica carinata HOM05D000247 ORTHO05D000288 5.1e-08 61.2 49 59.2
BolC5t34580H Brassica oleracea HOM05D000247 ORTHO05D000288 5.1e-08 61.2 49 59.2
Lalb_Chr03g0043791 Lupinus albus HOM05D000247 ORTHO05D000288 5.1e-08 61.2 49 57.1
Manes.09G122800 Manihot esculenta HOM05D000247 ORTHO05D000288 5.1e-08 61.2 49 61.2
Medtr7g073680 Medicago truncatula HOM05D000247 ORTHO05D000288 6.6e-08 60.8 49 55.1
Thecc.04G149400 Theobroma cacao HOM05D000247 ORTHO05D000288 6.6e-08 60.8 49 57.1
Carub.0003s0784 Capsella rubella HOM05D000247 ORTHO05D000288 8.6e-08 60.5 49 57.1
Ca_07773_v3 Cicer arietinum L. HOM05D000247 ORTHO05D000288 8.6e-08 60.5 49 55.1
Duzib151G0468 Durio zibethinus HOM05D000247 ORTHO05D000288 8.6e-08 60.5 49 55.1
AL3G19710 Arabidopsis lyrata HOM05D000247 ORTHO05D000288 1.1e-07 60.1 49 57.1
BNapus_Darmor_BZH_scaffold_167p00100 Brassica napus HOM05D000247 ORTHO05D000288 1.1e-07 60.1 55 54.5
CANSAT21G0428 Cannabis sativa HOM05D000247 ORTHO05D000288 1.1e-07 60.1 49 57.1
CANSAT21G2479 Cannabis sativa HOM05D000247 ORTHO05D000288 1.1e-07 60.1 49 57.1
Ciclev10013063m.g Citrus clementina HOM05D000247 ORTHO05D000288 1.1e-07 60.1 49 55.1
Eucgr.A00783 Eucalyptus grandis HOM05D000247 ORTHO05D000288 1.5e-07 59.7 58 51.7
Hma1.2p1_0537F.1_g174240 Hydrangea macrophylla HOM05D000247 ORTHO05D000288 1.5e-07 59.7 49 61.2
Sabra06G0085500 Salix brachista HOM05D000247 ORTHO05D000288 1.5e-07 59.7 49 55.1
Duzib268G0142 Durio zibethinus HOM05D000247 ORTHO05D000288 1.9e-07 59.3 49 55.1
AT3G08710 Arabidopsis thaliana HOM05D000247 ORTHO05D000288 2.5e-07 58.9 49 55.1
CSS0032442 Camellia sinensis var. sinensis HOM05D000247 ORTHO05D000288 2.5e-07 58.9 49 57.1
COL.COLO4_21255 Corchorus olitorius HOM05D000247 ORTHO05D000288 2.5e-07 58.9 49 57.1
Gohir.A10G153000 Gossypium hirsutum HOM05D000247 ORTHO05D000288 2.5e-07 58.9 49 53.1
Gohir.D10G113200 Gossypium hirsutum HOM05D000247 ORTHO05D000288 2.5e-07 58.9 49 53.1
Gorai.011G125000 Gossypium raimondii HOM05D000247 ORTHO05D000288 2.5e-07 58.9 49 53.1
Os01g0168200 Oryza sativa ssp. japonica HOM05D000247 ORTHO05D000288 2.5e-07 58.9 49 53.1
arahy.Tifrunner.gnm1.ann1.B4NR9M Arachis hypogaea HOM05D000247 ORTHO05D000288 3.3e-07 58.5 49 55.1
arahy.Tifrunner.gnm1.ann1.LU3G0P Arachis hypogaea HOM05D000247 ORTHO05D000288 3.3e-07 58.5 49 55.1
Lj1g0011666 Lotus japonicus HOM05D000247 ORTHO05D000288 3.3e-07 58.5 49 55.1
PSO017G4642 Papaver somniferum HOM05D000247 ORTHO05D000288 3.3e-07 58.5 51 56.9
Cc06_g00280 Coffea canephora HOM05D000247 ORTHO05D000288 4.3e-07 58.2 49 55.1
MELO3C025230.2 Cucumis melo HOM05D000247 ORTHO05D000288 4.3e-07 58.2 49 53.1
Lalb_Chr19g0123991 Lupinus albus HOM05D000247 ORTHO05D000288 4.3e-07 58.2 49 53.1
Aa31LG5G18740 Aethionema arabicum HOM05D000247 ORTHO05D000288 5.6e-07 57.8 49 51.0
Psat2g182440 Pisum sativum HOM05D000247 ORTHO05D000288 5.6e-07 57.8 52 51.9
Rhsim05G0232300 Rhododendron simsii HOM05D000247 ORTHO05D000288 5.6e-07 57.8 49 57.1
Lj3g0004697 Lotus japonicus HOM05D000247 ORTHO05D000288 7.3e-07 57.4 51 51.0
Sc20g0007130 Simmondsia chinensis HOM05D000247 ORTHO05D000288 7.3e-07 57.4 49 51.0
MD12G1190800 Malus domestica HOM05D000247 ORTHO05D000288 9.5e-07 57.0 49 46.9
CsaV3_4G027270 Cucumis sativus L. HOM05D000247 ORTHO05D000288 1.2e-06 56.6 49 51.0
Glyma.18G215900 Glycine max HOM05D000247 ORTHO05D000288 1.2e-06 56.6 49 53.1
vmacro20383 Vaccinium macrocarpon HOM05D000247 ORTHO05D000288 1.2e-06 56.6 49 55.1
PSO170G3570 Papaver somniferum HOM05D000247 ORTHO05D000288 1.6e-06 56.2 40 65.0
Phvul.010G058600 Phaseolus vulgaris HOM05D000247 ORTHO05D000288 1.6e-06 56.2 50 56.0
Haze_21196 Corylus avellana HOM05D000050 ORTHO05D000288 2.1e-06 55.8 39 64.1
Nn5g26816 Nelumbo nucifera HOM05D000247 ORTHO05D000288 2.1e-06 55.8 49 57.1
Aqoxy4G03291 Aquilegia oxysepala HOM05D000247 ORTHO05D000288 2.8e-06 55.5 49 53.1
Sabra04G0154700 Salix brachista HOM05D000247 ORTHO05D000288 2.8e-06 55.5 46 52.2
VMungo0331G1829 Vigna mungo HOM05D000247 ORTHO05D000288 2.8e-06 55.5 49 51.0
Nn2g10252 Nelumbo nucifera HOM05D000247 ORTHO05D000288 3.6e-06 55.1 49 53.1
MSTRG.27251 Avicennia marina HOM05D000247 ORTHO05D000288 4.7e-06 54.7 49 51.0
Lalb_Chr07g0195751 Lupinus albus HOM05D000247 ORTHO05D000288 4.7e-06 54.7 49 51.0
MD04G1176500 Malus domestica HOM05D000247 ORTHO05D000288 4.7e-06 54.7 49 51.0
arahy.Tifrunner.gnm1.ann1.CSNE3R Arachis hypogaea HOM05D000247 ORTHO05D000288 6.2e-06 54.3 49 53.1
A05p40090 Brassica napus HOM05D000033 ORTHO05D000913 6.2e-06 54.3 38 65.8
C05p59160 Brassica napus HOM05D000050 ORTHO05D000288 6.2e-06 54.3 38 65.8
ClCG04G006290 Citrullus lanatus HOM05D000247 ORTHO05D000288 6.2e-06 54.3 49 49.0
Glyma.16G220500 Glycine max HOM05D000247 ORTHO05D000288 6.2e-06 54.3 49 55.1
arahy.Tifrunner.gnm1.ann1.079M4U Arachis hypogaea HOM05D000247 ORTHO05D000288 8.1e-06 53.9 49 53.1
Zm00001eb123200 Zea mays HOM05D000247 ORTHO05D000288 8.1e-06 53.9 46 47.8


User provided reference genes

Program Settings