Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 3.4e-177 625.2 381 100.0
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 2.8e-155 552.4 366 90.2
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 8.4e-152 540.8 369 76.2
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 5.4e-151 538.1 365 84.7
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 1.2e-150 537.0 369 79.7
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 1.2e-150 537.0 371 86.3
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 2.7e-150 535.8 373 86.1
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 6.6e-149 531.2 374 84.8
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 1.1e-148 530.4 374 85.6
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 3.3e-148 528.9 368 79.1
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 4.3e-148 528.5 366 81.4
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 2.4e-146 522.7 367 87.2
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 9.0e-146 520.8 365 82.7
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 9.0e-146 520.8 392 80.9
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 4.5e-145 518.5 376 84.0
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 5.8e-145 518.1 380 83.9
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 1.3e-144 516.9 385 83.4
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 1.3e-144 516.9 369 81.8
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 1.7e-144 516.5 374 75.4
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 2.2e-144 516.2 363 72.5
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 2.2e-144 516.2 363 72.5
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 1.1e-143 513.8 374 85.6
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 2.4e-143 512.7 365 71.5
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 3.2e-143 512.3 376 81.6
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 4.2e-143 511.9 379 82.6
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 7.1e-143 511.1 376 77.7
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 7.9e-142 507.7 381 77.2
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 1.3e-141 506.9 375 77.3
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 1.8e-141 506.5 392 81.1
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 3.0e-141 505.8 376 84.0
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 5.1e-141 505.0 375 71.2
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 6.7e-141 504.6 378 82.8
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 1.1e-140 503.8 393 76.3
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 3.3e-140 502.3 371 79.8
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 4.3e-140 501.9 383 82.2
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 4.3e-140 501.9 384 83.3
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 9.6e-140 500.7 399 78.2
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 2.1e-139 499.6 368 77.2
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 2.8e-139 499.2 361 84.2
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 1.1e-138 497.3 395 69.1
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 1.8e-138 496.5 401 74.3
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 5.3e-138 495.0 363 73.3
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 5.8e-137 491.5 393 71.2
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 4.9e-136 488.4 394 75.4
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 1.6e-134 483.4 393 72.3
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 2.7e-134 482.6 404 65.8
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 7.9e-134 481.1 408 61.5
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 2.3e-133 479.6 401 63.6
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 3.9e-133 478.8 388 80.2
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 1.6e-131 473.4 385 77.4
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 3.7e-131 472.2 379 76.8
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 4.8e-131 471.9 373 72.4
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 8.2e-131 471.1 385 76.9
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 8.2e-131 471.1 385 79.5
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 1.1e-130 470.7 367 67.6
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 2.4e-130 469.5 380 76.6
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 3.1e-130 469.2 361 66.2
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 1.2e-129 467.2 361 65.7
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 3.4e-129 465.7 400 71.5
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 1.3e-128 463.8 395 72.2
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 4.9e-128 461.8 349 67.9
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 1.9e-127 459.9 376 71.8
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 7.1e-127 458.0 344 80.8
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 2.1e-126 456.4 364 79.1
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.0e-126 454.9 391 70.8
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 7.9e-126 454.5 402 65.9
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.3e-125 453.8 396 69.9
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 1.8e-125 453.4 349 82.5
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.3e-125 453.0 394 70.6
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.9e-125 452.2 387 72.4
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 5.1e-125 451.8 401 65.8
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 4.1e-122 442.2 374 70.6
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 3.4e-121 439.1 373 68.1
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 7.7e-121 438.0 384 69.3
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 1.3e-120 437.2 383 73.9
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 1.7e-120 436.8 390 66.9
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 1.7e-120 436.8 392 71.2
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 1.9e-119 433.3 388 69.1
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 3.2e-119 432.6 392 65.3
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 4.2e-119 432.2 389 65.3
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 1.6e-118 430.3 388 71.6
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 2.1e-118 429.9 397 66.0
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 1.0e-117 427.6 383 67.4
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 1.8e-117 426.8 388 71.4
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 1.8e-117 426.8 388 71.4
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 2.3e-117 426.4 393 64.6
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 2.3e-117 426.4 393 64.6
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 3.9e-117 425.6 393 63.9
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 3.9e-117 425.6 393 63.9
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 8.8e-117 424.5 392 70.9
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 1.1e-116 424.1 392 67.1
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 2.0e-116 423.3 394 70.6
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 9.7e-116 421.0 392 70.7
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 2.2e-115 419.9 334 68.0
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 2.2e-115 419.9 325 74.5
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 3.7e-115 419.1 452 57.3
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 1.5e-113 413.7 410 64.6
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 2.2e-112 409.8 361 64.3
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.2e-112 409.8 328 65.2
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 1.1e-111 407.5 381 63.0
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 1.4e-111 407.1 495 55.6
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 2.5e-111 406.4 361 62.6
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 1.2e-110 404.1 329 75.4
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 1.8e-109 400.2 352 68.2
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 8.8e-109 397.9 289 82.0
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 1.5e-108 397.1 290 74.1
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 3.3e-108 396.0 390 63.6
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 3.5e-105 386.0 383 68.7
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.9e-105 385.2 383 68.4
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 7.7e-105 384.8 380 66.6
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 7.7e-105 384.8 380 65.8
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 1.7e-104 383.6 325 61.2
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.4e-101 374.0 380 61.1
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.5e-100 370.5 399 62.7
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 5.0e-96 355.5 386 54.9
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 5.2e-93 345.5 383 62.7
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 8.3e-91 338.2 382 51.0
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 7.0e-90 335.1 408 50.7
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 3.2e-87 326.2 375 55.5
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 8.0e-86 321.6 330 55.2
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 1.4e-85 320.9 343 49.9
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 7.5e-84 315.1 159 89.9
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 9.8e-84 314.7 329 50.2
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 7.7e-81 305.1 159 86.2
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.3e-80 304.3 341 47.5
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 3.0e-77 293.1 296 50.0
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 9.8e-76 288.1 273 75.5
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 2.2e-75 287.0 366 54.6
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 1.3e-72 277.7 269 74.7
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 2.6e-68 263.5 290 65.9
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 5.6e-63 245.7 121 92.6
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 3.2e-58 229.9 261 53.6
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 1.6e-54 217.6 106 92.5
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 3.6e-54 216.5 105 92.4
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 1.1e-53 214.9 147 76.2
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 1.6e-46 191.0 113 74.3
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 2.2e-43 180.6 317 36.6
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 8.4e-43 178.7 159 55.3
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 1.9e-42 177.6 84 92.9
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 2.8e-38 163.7 142 64.1
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 9.0e-29 132.1 260 32.7
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 7.9e-25 119.0 100 67.0
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 1.6e-14 84.7 83 45.8
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 9.0e-13 79.0 37 91.9
unitig_61.g26223 Utricularia gibba HOM05D005199 ORTHO05D006277 3.2e-10 70.5 58 58.6
unitig_0.g1098 Utricularia gibba HOM05D005199 ORTHO05D006277 1.2e-09 68.6 71 49.3


User provided reference genes

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