Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0151 Trochodendron aralioides HOM05D005424 ORTHO05D006726 1.1e-90 336.7 182 100.0
TAR636G1325 Trochodendron aralioides HOM05D005424 ORTHO05D006726 1.7e-38 163.3 149 63.8
Aqoxy7G00007 Aquilegia oxysepala HOM05D005424 ORTHO05D006726 8.4e-33 144.4 179 52.0
Dinv12891 Davidia involucrata HOM05D005424 ORTHO05D006726 2.1e-28 129.8 164 50.6
Dinv18754 Davidia involucrata HOM05D005424 ORTHO05D006726 2.1e-28 129.8 158 50.0
Thecc.03G218200 Theobroma cacao HOM05D005424 ORTHO05D006726 1.3e-25 120.6 175 46.9
COL.COLO4_10822 Corchorus olitorius HOM05D005424 ORTHO05D006726 6.4e-25 118.2 159 49.1
MBI12_g14812_MAGBIO Magnolia biondii HOM05D005424 ORTHO05D006726 6.4e-25 118.2 182 49.5
PSO782G1858 Papaver somniferum HOM05D005424 ORTHO05D006726 1.9e-24 116.7 174 44.3
PSO063G2765 Papaver somniferum HOM05D005424 ORTHO05D006726 3.2e-24 115.9 174 44.8
CSS0028831 Camellia sinensis var. sinensis HOM05D005424 ORTHO05D006726 1.2e-23 114.0 174 42.5
Gorai.008G259800 Gossypium raimondii HOM05D005424 ORTHO05D006726 1.6e-23 113.6 180 43.3
Gohir.A12G241300 Gossypium hirsutum HOM05D005424 ORTHO05D006726 2.7e-23 112.8 180 42.8
Rhsim07G0076500 Rhododendron simsii HOM05D005424 ORTHO05D006726 2.7e-23 112.8 185 41.1
vmacro13840 Vaccinium macrocarpon HOM05D005424 ORTHO05D006726 2.7e-23 112.8 176 42.6
Cfa011902 Carpinus fangiana HOM05D005424 ORTHO05D006726 4.6e-23 112.1 179 44.7
Gohir.D12G242600 Gossypium hirsutum HOM05D005424 ORTHO05D006726 7.8e-23 111.3 177 43.5
Haze_09196 Corylus avellana HOM05D005424 ORTHO05D006726 1.0e-22 110.9 175 44.6
GSVIVG01019675001 Vitis vinifera HOM05D005424 ORTHO05D006726 1.7e-22 110.2 179 43.6
Ciclev10018587m.g Citrus clementina HOM05D005424 ORTHO05D006726 3.9e-22 109.0 174 40.2
Atru.chr9.1859 Acer truncatum HOM05D005424 ORTHO05D006726 4.3e-21 105.5 176 41.5
Duzib205G0106 Durio zibethinus HOM05D005424 ORTHO05D006726 7.3e-21 104.8 177 43.5
Potri.001G448900 Populus trichocarpa HOM05D005424 ORTHO05D006726 1.8e-19 100.1 177 41.8
Sabra16G0303000 Salix brachista HOM05D005424 ORTHO05D006726 5.3e-19 98.6 177 41.2
CiPaw.11G110500 Carya illinoinensis HOM05D005424 ORTHO05D006726 4.5e-18 95.5 155 42.6
Cpa.g.sc37.92 Carica papaya HOM05D005424 ORTHO05D006726 2.9e-17 92.8 172 40.7
Lj2A154T41 Lonicera japonica HOM05D005424 ORTHO05D006726 8.4e-17 91.3 140 43.6
Nitab4.5_0002520g0100 Nicotiana tabacum HOM05D005424 ORTHO05D006726 1.2e-15 87.4 176 38.1
CAN.G567.102 Capsicum annuum HOM05D005424 ORTHO05D006726 3.5e-15 85.9 168 36.9
Nitab4.5_0003419g0090 Nicotiana tabacum HOM05D005424 ORTHO05D006726 4.6e-15 85.5 176 36.9
Potri.011G152600 Populus trichocarpa HOM05D005424 ORTHO05D006726 1.0e-14 84.3 177 36.7
Solyc08g083290.4 Solanum lycopersicum HOM05D005424 ORTHO05D006726 1.8e-14 83.6 184 37.0
Manes.01G055600 Manihot esculenta HOM05D005424 ORTHO05D006726 5.1e-14 82.0 155 37.4
Sopen08g031500 Solanum pennellii HOM05D005424 ORTHO05D006726 5.1e-14 82.0 184 36.4
TWI81G0285 Tripterygium wilfordii HOM05D005424 ORTHO05D006726 6.7e-14 81.6 183 37.7
Prupe.5G132500 Prunus persica HOM05D005424 ORTHO05D006726 1.5e-13 80.5 155 39.4
PGSC0003DMG402012227 Solanum tuberosum HOM05D005424 ORTHO05D006726 1.5e-13 80.5 184 35.9
MD06G1121800 Malus domestica HOM05D005424 ORTHO05D006726 2.5e-13 79.7 155 40.0
Sabra11G0148200 Salix brachista HOM05D005424 ORTHO05D006726 2.5e-13 79.7 177 37.3
Nn7g38300 Nelumbo nucifera HOM05D005424 ORTHO05D006726 2.1e-12 76.6 214 34.1
DCAR_009582 Daucus carota HOM05D005424 ORTHO05D006726 2.4e-11 73.2 176 38.6
FvH4_5g10620 Fragaria vesca HOM05D005424 ORTHO05D006726 6.9e-11 71.6 179 32.4
FAN18G4434 Fragaria x ananassa HOM05D005424 ORTHO05D006726 6.9e-11 71.6 179 32.4
FAN13G2865 Fragaria x ananassa HOM05D005424 ORTHO05D006726 1.5e-10 70.5 179 31.8
RcHm_v2.0_Chr7g0187521 Rosa chinensis HOM05D005424 ORTHO05D006726 2.0e-10 70.1 179 32.4
Peaxi162Scf00074g00151 Petunia axillaris HOM05D005424 ORTHO05D006726 2.6e-10 69.7 211 31.8
Eucgr.D01670 Eucalyptus grandis HOM05D005424 ORTHO05D006726 2.2e-09 66.6 176 34.7
CANSAT21G2321 Cannabis sativa HOM05D005424 ORTHO05D006726 2.9e-09 66.2 172 36.6
arahy.Tifrunner.gnm1.ann1.BAML4E Arachis hypogaea HOM05D005424 ORTHO05D006726 4.9e-09 65.5 178 35.4
TPR.G34809 Trifolium pratense HOM05D005424 ORTHO05D006726 2.4e-08 63.2 180 34.4
SEGI_18929 Sequoiadendron giganteum HOM05D005424 ORTHO05D006726 9.3e-08 61.2 188 32.4
PGR031G0320 Punica granatum HOM05D005424 ORTHO05D006726 1.2e-07 60.8 168 32.1
QL02p027371 Quercus lobata HOM05D005424 ORTHO05D006726 7.9e-07 58.2 132 34.8
THA.LOC104806458 Tarenaya hassleriana HOM05D005424 ORTHO05D006726 1.3e-06 57.4 173 37.6
Duzib068G1314 Durio zibethinus HOM05D005424 ORTHO05D006726 2.3e-06 56.6 174 33.3
FAN08G3416 Fragaria x ananassa HOM05D005424 ORTHO05D006726 8.7e-06 54.7 155 31.0
Psat6g052720 Pisum sativum HOM05D005424 ORTHO05D006726 8.7e-06 54.7 177 32.2


User provided reference genes

Program Settings