Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0148 Trochodendron aralioides HOM05D007158 ORTHO05D007424 3.1e-108 395.6 268 100.0
TAR629G2388 Trochodendron aralioides HOM05D007158 ORTHO05D007424 4.3e-78 295.4 270 72.6
Nn4g24036 Nelumbo nucifera HOM05D007158 ORTHO05D007424 3.8e-50 202.6 270 62.2
GSVIVG01030945001 Vitis vinifera HOM05D007158 ORTHO05D007424 2.7e-48 196.4 269 61.3
Cfa007880 Carpinus fangiana HOM05D007158 ORTHO05D007424 1.5e-43 180.6 267 48.3
Thecc.04G126100 Theobroma cacao HOM05D007158 ORTHO05D007424 2.0e-43 180.3 268 55.6
Duzib138G0519 Durio zibethinus HOM05D007158 ORTHO05D007424 8.5e-42 174.9 265 55.1
Aqoxy3G00164 Aquilegia oxysepala HOM05D007158 ORTHO05D007424 4.2e-41 172.6 215 63.3
Dinv33973 Davidia involucrata HOM05D007158 ORTHO05D007424 1.2e-40 171.0 284 53.2
Gorai.007G178700 Gossypium raimondii HOM05D007158 ORTHO05D007424 8.0e-40 168.3 242 54.1
Gohir.D11G167600 Gossypium hirsutum HOM05D007158 ORTHO05D007424 1.0e-39 167.9 242 54.1
CDE04G0479 Ceratophyllum demersum HOM05D007158 ORTHO05D007424 1.8e-39 167.2 283 42.8
Dinv14854 Davidia involucrata HOM05D007158 ORTHO05D007424 3.0e-39 166.4 187 65.2
Gohir.A11G161300 Gossypium hirsutum HOM05D007158 ORTHO05D007424 3.0e-39 166.4 242 54.1
Hma1.2p1_0500F.1_g167110 Hydrangea macrophylla HOM05D007158 ORTHO05D007424 3.9e-39 166.0 266 51.5
Rhsim08G0084200 Rhododendron simsii HOM05D007158 ORTHO05D007424 1.1e-38 164.5 191 58.1
QL02p049322 Quercus lobata HOM05D007158 ORTHO05D007424 4.4e-38 162.5 268 52.2
COL.COLO4_03615 Corchorus olitorius HOM05D007158 ORTHO05D007424 4.8e-37 159.1 205 62.0
Eucgr.F02798 Eucalyptus grandis HOM05D007158 ORTHO05D007424 4.8e-37 159.1 209 50.7
Ciclev10012598m.g Citrus clementina HOM05D007158 ORTHO05D007424 6.3e-37 158.7 266 42.5
PGR004G0702 Punica granatum HOM05D007158 ORTHO05D007424 1.1e-36 157.9 234 44.4
Prupe.3G150100 Prunus persica HOM05D007158 ORTHO05D007424 1.8e-36 157.1 265 50.6
Actinidia17647 Actinidia chinensis HOM05D007158 ORTHO05D007424 5.3e-36 155.6 269 54.3
CDE06G2846 Ceratophyllum demersum HOM05D007158 ORTHO05D007424 5.3e-36 155.6 278 48.9
ECA232G0903 Erigeron canadensis HOM05D007158 ORTHO05D007424 9.1e-36 154.8 207 58.5
PSO339G0418 Papaver somniferum HOM05D007158 ORTHO05D007424 9.1e-36 154.8 149 57.7
MD09G1258200 Malus domestica HOM05D007158 ORTHO05D007424 2.0e-35 153.7 216 56.9
ATR0743G078 Amborella trichopoda HOM05D007158 ORTHO05D007424 1.0e-34 151.4 204 57.4
Lj4A182G65 Lonicera japonica HOM05D007158 ORTHO05D007424 1.3e-34 151.0 142 60.6
HanXRQChr09g0262471 Helianthus annuus HOM05D007158 ORTHO05D007424 2.9e-34 149.8 151 59.6
Lsat_1_v5_gn_4_156301 Lactuca sativa HOM05D007158 ORTHO05D007424 6.5e-34 148.7 208 56.2
Potri.017G121000 Populus trichocarpa HOM05D007158 ORTHO05D007424 1.1e-33 147.9 278 45.7
RcHm_v2.0_Chr1g0332591 Rosa chinensis HOM05D007158 ORTHO05D007424 1.5e-33 147.5 237 47.7
Ah.10g037870 Amaranthus hybridus HOM05D007158 ORTHO05D007424 2.5e-33 146.7 154 55.8
Glyma.02G090200 Glycine max HOM05D007158 ORTHO05D007424 3.2e-33 146.4 190 48.9
Os01g0505700 Oryza sativa ssp. japonica HOM05D007158 ORTHO05D007424 7.2e-33 145.2 156 51.3
DCAR_025891 Daucus carota HOM05D007158 ORTHO05D007424 9.4e-33 144.8 206 51.5
Duzib133G0688 Durio zibethinus HOM05D007158 ORTHO05D007424 9.4e-33 144.8 231 54.1
Cpa.g.sc170.15 Carica papaya HOM05D007158 ORTHO05D007424 1.2e-32 144.4 245 50.6
CiPaw.04G044500 Carya illinoinensis HOM05D007158 ORTHO05D007424 3.6e-32 142.9 269 43.5
AUR62023262 Chenopodium quinoa HOM05D007158 ORTHO05D007424 8.0e-32 141.7 154 53.9
Hund13698 Selenicereus undatus HOM05D007158 ORTHO05D007424 1.4e-31 141.0 290 45.2
Sc10g0001000 Simmondsia chinensis HOM05D007158 ORTHO05D007424 1.8e-31 140.6 155 58.7
ClCG07G016450 Citrullus lanatus HOM05D007158 ORTHO05D007424 3.0e-31 139.8 239 41.8
Rhsim10G0076900 Rhododendron simsii HOM05D007158 ORTHO05D007424 5.2e-31 139.0 212 45.3
Zm00001eb300940 Zea mays HOM05D007158 ORTHO05D007424 5.2e-31 139.0 141 52.5
MSTRG.2781 Avicennia marina HOM05D007158 ORTHO05D007424 1.2e-30 137.9 210 55.2
HPP92_023114 Vanilla planifolia HOM05D007158 ORTHO05D007424 1.2e-30 137.9 244 53.7
Lalb_Chr10g0091481 Lupinus albus HOM05D007158 ORTHO05D007424 1.5e-30 137.5 191 43.5
Manes.01G113800 Manihot esculenta HOM05D007158 ORTHO05D007424 1.5e-30 137.5 205 52.2
Atru.chr1.1578 Acer truncatum HOM05D007158 ORTHO05D007424 2.6e-30 136.7 205 52.2
CANSAT78G1746 Cannabis sativa HOM05D007158 ORTHO05D007424 2.6e-30 136.7 206 51.5
Sabra17G0103400 Salix brachista HOM05D007158 ORTHO05D007424 2.6e-30 136.7 146 52.7
Cc07_g08430 Coffea canephora HOM05D007158 ORTHO05D007424 3.4e-30 136.3 268 47.8
MELO3C010379.2 Cucumis melo HOM05D007158 ORTHO05D007424 3.4e-30 136.3 239 41.0
TWI74G0884 Tripterygium wilfordii HOM05D007158 ORTHO05D007424 4.4e-30 136.0 155 54.8
CAN.G225.14 Capsicum annuum HOM05D007158 ORTHO05D007424 5.7e-30 135.6 224 52.2
CsaV3_4G010370 Cucumis sativus L. HOM05D007158 ORTHO05D007424 9.7e-30 134.8 226 44.2
Glyma.18G293000 Glycine max HOM05D007158 ORTHO05D007424 9.7e-30 134.8 206 51.5
PSO384G2845 Papaver somniferum HOM05D007158 ORTHO05D007424 6.3e-29 132.1 132 55.3
arahy.Tifrunner.gnm1.ann1.5M3IQK Arachis hypogaea HOM05D007158 ORTHO05D007424 8.3e-29 131.7 187 50.3
Solyc02g063280.4 Solanum lycopersicum HOM05D007158 ORTHO05D007424 1.1e-28 131.3 153 53.6
VMungo1383G1080 Vigna mungo HOM05D007158 ORTHO05D007424 1.1e-28 131.3 191 48.2
Migut.H00250 Erythranthe guttata HOM05D007158 ORTHO05D007424 1.8e-28 130.6 215 40.9
Lj1g0013464 Lotus japonicus HOM05D007158 ORTHO05D007424 1.8e-28 130.6 195 48.2
Phvul.008G009100 Phaseolus vulgaris HOM05D007158 ORTHO05D007424 1.8e-28 130.6 266 48.1
Sopen02g014350 Solanum pennellii HOM05D007158 ORTHO05D007424 1.8e-28 130.6 153 53.6
PGSC0003DMG400010413 Solanum tuberosum HOM05D007158 ORTHO05D007424 1.8e-28 130.6 154 53.2
Peaxi162Scf00343g00058 Petunia axillaris HOM05D007158 ORTHO05D007424 2.4e-28 130.2 235 54.5
Oeu047435.1 Olea europaea HOM05D007158 ORTHO05D007424 5.3e-28 129.0 260 49.2
Nitab4.5_0000036g0590 Nicotiana tabacum HOM05D007158 ORTHO05D007424 7.0e-28 128.6 198 56.6
Potri.004G094500 Populus trichocarpa HOM05D007158 ORTHO05D007424 7.0e-28 128.6 279 39.4
SGA_v2.0_scaffold202G41480 Striga asiatica HOM05D007158 ORTHO05D007424 9.1e-28 128.3 253 52.2
arahy.Tifrunner.gnm1.ann1.896A9W Arachis hypogaea HOM05D007158 ORTHO05D007424 1.2e-27 127.9 130 52.3
Haze_14197 Corylus avellana HOM05D007158 ORTHO05D007424 1.6e-27 127.5 191 44.5
Nitab4.5_0002644g0050 Nicotiana tabacum HOM05D007158 ORTHO05D007424 1.6e-27 127.5 272 49.6
FvH4_7g05720 Fragaria vesca HOM05D007158 ORTHO05D007424 5.9e-27 125.6 227 44.9
FAN01G1160 Fragaria x ananassa HOM05D007158 ORTHO05D007424 5.9e-27 125.6 227 44.9
vmacro18064 Vaccinium macrocarpon HOM05D007158 ORTHO05D007424 5.0e-26 122.5 198 56.6
FAN10G2330 Fragaria x ananassa HOM05D007158 ORTHO05D007424 5.5e-25 119.0 204 46.6
Psat3g097040 Pisum sativum HOM05D007158 ORTHO05D007424 7.2e-25 118.6 196 42.9
EL10Ac2g04517 Beta vulgaris HOM05D007158 ORTHO05D007424 9.4e-25 118.2 216 43.5
Medtr7g082850 Medicago truncatula HOM05D007158 ORTHO05D007424 1.2e-24 117.9 138 49.3
TPR.G28397 Trifolium pratense HOM05D007158 ORTHO05D007424 4.7e-24 115.9 194 50.0
Rhsim10G0074300 Rhododendron simsii HOM05D007158 ORTHO05D007424 1.4e-23 114.4 159 49.1
FAN23G0239 Fragaria x ananassa HOM05D007158 ORTHO05D007424 3.0e-23 113.2 235 40.0
FAN04G1654 Fragaria x ananassa HOM05D007158 ORTHO05D007424 4.8e-21 105.9 227 40.1
FAN03G1259 Fragaria x ananassa HOM05D007158 ORTHO05D007424 1.8e-20 104.0 227 37.9
Sabra04G0063800 Salix brachista HOM05D007158 ORTHO05D007424 4.1e-20 102.8 192 44.3
SHI25695 Sapria himalayana HOM05D000002 ORTHO05D000001 9.1e-20 101.7 134 43.3
Ca_08098_v3 Cicer arietinum L. HOM05D007158 ORTHO05D007424 2.9e-18 96.7 191 38.7
Mapoly0099s0058 Marchantia polymorpha HOM05D007158 ORTHO05D007424 8.6e-18 95.1 164 36.0
Sabra17G0100100 Salix brachista HOM05D007158 ORTHO05D007424 1.9e-17 94.0 196 39.3
SMO119G0024 Selaginella moellendorffii HOM05D007158 ORTHO05D007424 3.6e-16 89.7 84 56.0
Sed0005493 Sechium edule HOM05D007158 ORTHO05D007424 4.0e-15 86.3 162 38.3
AagrBONN_evm.TU.Sc2ySwM_117.711 Anthoceros agrestis HOM05D007158 ORTHO05D007424 1.5e-14 84.3 163 38.0
Pp3c14_9040 Physcomitrium patens HOM05D007158 ORTHO05D007424 4.4e-14 82.8 67 55.2
THA.LOC104809979 Tarenaya hassleriana HOM05D007158 ORTHO05D007424 3.7e-13 79.7 232 28.0
MBI16_g21167_MAGBIO Magnolia biondii HOM05D007158 ORTHO05D007424 1.4e-12 77.8 91 52.7
CBR_g32195 Chara braunii HOM05D007158 ORTHO05D007424 4.1e-12 76.3 128 39.1
Sabra16G0085100 Salix brachista HOM05D005274 ORTHO05D007424 7.0e-12 75.5 58 69.0
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 3.5e-11 73.2 56 69.6
Sabra07G0113400 Salix brachista HOM05D005274 ORTHO05D006485 5.9e-11 72.4 56 67.9
Carub.0002s0469 Capsella rubella HOM05D007158 ORTHO05D007424 2.9e-10 70.1 70 42.9
Oeu061824.1 Olea europaea HOM05D007158 ORTHO05D007424 2.9e-10 70.1 162 37.7
Sabra02G0148900 Salix brachista HOM05D005274 ORTHO05D006485 3.9e-10 69.7 57 66.7
Sabra10G0082800 Salix brachista HOM05D005274 ORTHO05D006485 3.9e-10 69.7 57 66.7
AL2G15950 Arabidopsis lyrata HOM05D011338 ORTHO05D007424 6.6e-10 68.9 66 50.0
Sabra16G0093500 Salix brachista HOM05D005274 ORTHO05D007424 1.1e-09 68.2 44 79.5
BolC1t03688H Brassica oleracea HOM05D011338 ORTHO05D007424 1.9e-09 67.4 70 45.7
CARHR052290 Cardamine hirsuta HOM05D007158 ORTHO05D007424 1.9e-09 67.4 71 46.5
BcaC09g49385 Brassica carinata HOM05D011338 ORTHO05D007424 2.5e-09 67.0 66 48.5
C01p37190 Brassica napus HOM05D011338 ORTHO05D007424 2.5e-09 67.0 66 48.5
Sp2g04080 Schrenkiella parvula HOM05D011338 ORTHO05D007424 3.3e-09 66.6 66 48.5
BraA01t03075Z Brassica rapa HOM05D011338 ORTHO05D007424 4.3e-09 66.2 70 45.7
A01p29410 Brassica napus HOM05D011338 ORTHO05D007424 5.6e-09 65.9 70 42.9
Thhalv10023615m.g Eutrema salsugineum HOM05D011338 ORTHO05D007424 1.6e-08 64.3 66 45.5
AT1G60640 Arabidopsis thaliana HOM05D007158 ORTHO05D007424 3.6e-08 63.2 195 40.5
C04p25850 Brassica napus HOM05D011338 ORTHO05D007424 2.3e-07 60.5 41 61.0
BolC4t24223H Brassica oleracea HOM05D011338 ORTHO05D007424 2.3e-07 60.5 41 61.0
BcaC06g31815 Brassica carinata HOM05D011338 ORTHO05D007424 2.0e-06 57.4 44 52.3
CSS0048374 Camellia sinensis var. sinensis HOM05D048559 ORTHO05D007424 2.6e-06 57.0 108 48.1
Rhsim10G0075600 Rhododendron simsii HOM05D007158 ORTHO05D338363 3.4e-06 56.6 145 35.9
Sabra10G0082900 Salix brachista HOM05D005631 ORTHO05D006765 7.5e-06 55.5 39 74.4


User provided reference genes

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