Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0137 Trochodendron aralioides HOM05D002115 ORTHO05D002263 2.7e-58 228.4 111 100.0
Dinv38599 Davidia involucrata HOM05D002115 ORTHO05D002263 2.7e-10 68.9 51 64.7
Cfa019839 Carpinus fangiana HOM05D002115 ORTHO05D002263 4.6e-10 68.2 37 81.1
Nn3g17679 Nelumbo nucifera HOM05D002115 ORTHO05D002263 1.0e-09 67.0 51 60.8
CSS0028652 Camellia sinensis var. sinensis HOM05D002115 ORTHO05D002263 1.8e-09 66.2 63 54.0
PSO063G6529 Papaver somniferum HOM05D002115 ORTHO05D002263 3.9e-09 65.1 34 79.4
PSO782G0522 Papaver somniferum HOM05D002115 ORTHO05D002263 3.9e-09 65.1 34 79.4
Aqoxy3G03873 Aquilegia oxysepala HOM05D002115 ORTHO05D002263 5.1e-09 64.7 51 56.9
Manes.01G021800 Manihot esculenta HOM05D002115 ORTHO05D002263 5.1e-09 64.7 49 59.2
Gohir.A07G040700 Gossypium hirsutum HOM05D002115 ORTHO05D002263 8.8e-09 63.9 55 56.4
Gohir.D07G044900 Gossypium hirsutum HOM05D002115 ORTHO05D002263 8.8e-09 63.9 55 56.4
Gorai.001G047900 Gossypium raimondii HOM05D002115 ORTHO05D002263 8.8e-09 63.9 55 56.4
Haze_18583 Corylus avellana HOM05D002115 ORTHO05D002263 1.5e-08 63.2 35 77.1
Haze_18585 Corylus avellana HOM05D002115 ORTHO05D002263 1.5e-08 63.2 35 77.1
Atru.chr9.725 Acer truncatum HOM05D002115 ORTHO05D002263 1.9e-08 62.8 35 80.0
Ciclev10019188m.g Citrus clementina HOM05D002115 ORTHO05D002263 1.9e-08 62.8 35 77.1
MD06G1209700 Malus domestica HOM05D002115 ORTHO05D002263 1.9e-08 62.8 35 77.1
MD14G1220400 Malus domestica HOM05D002115 ORTHO05D002263 1.9e-08 62.8 35 77.1
QL10p023276 Quercus lobata HOM05D002115 ORTHO05D002263 3.3e-08 62.0 35 77.1
VMungo1215G1940 Vigna mungo HOM05D002115 ORTHO05D002263 4.3e-08 61.6 39 64.1
Prupe.5G215700 Prunus persica HOM05D002115 ORTHO05D002263 5.7e-08 61.2 35 74.3
vmacro17687 Vaccinium macrocarpon HOM05D002115 ORTHO05D002263 7.4e-08 60.8 39 66.7
Actinidia31036 Actinidia chinensis HOM05D002115 ORTHO05D002263 9.7e-08 60.5 35 74.3
Thecc.03G026600 Theobroma cacao HOM05D002115 ORTHO05D002263 9.7e-08 60.5 71 46.5
GSVIVG01022738001 Vitis vinifera HOM05D002115 ORTHO05D002263 9.7e-08 60.5 33 81.8
CsaV3_1G006430 Cucumis sativus L. HOM05D002115 ORTHO05D002263 1.3e-07 60.1 35 68.6
Phvul.003G178600 Phaseolus vulgaris HOM05D002115 ORTHO05D002263 1.3e-07 60.1 35 71.4
RcHm_v2.0_Chr7g0184391 Rosa chinensis HOM05D002115 ORTHO05D002263 1.7e-07 59.7 35 71.4
TWI60G1253 Tripterygium wilfordii HOM05D002115 ORTHO05D002263 1.7e-07 59.7 49 59.2
Sed0001077 Sechium edule HOM05D002115 ORTHO05D002263 2.2e-07 59.3 35 62.9
Lj4g0016114 Lotus japonicus HOM05D002115 ORTHO05D002263 2.8e-07 58.9 35 71.4
EL10Ac5g11237 Beta vulgaris HOM05D002115 ORTHO05D002263 3.7e-07 58.5 34 67.6
Ca_02528_v3 Cicer arietinum L. HOM05D002115 ORTHO05D002263 3.7e-07 58.5 38 63.2
ClCG04G011340 Citrullus lanatus HOM05D002115 ORTHO05D002263 4.8e-07 58.2 35 65.7
Cc04_g07660 Coffea canephora HOM05D002115 ORTHO05D002263 4.8e-07 58.2 53 47.2
MELO3C002069.2 Cucumis melo HOM05D002115 ORTHO05D002263 4.8e-07 58.2 35 65.7
Sp1g35860 Schrenkiella parvula HOM05D002115 ORTHO05D002263 4.8e-07 58.2 52 53.8
Duzib068G0172 Durio zibethinus HOM05D002115 ORTHO05D002263 6.3e-07 57.8 71 47.9
FvH4_5g12830 Fragaria vesca HOM05D002115 ORTHO05D002263 6.3e-07 57.8 33 72.7
FAN08G0485 Fragaria x ananassa HOM05D002115 ORTHO05D002263 6.3e-07 57.8 33 72.7
FAN13G0771 Fragaria x ananassa HOM05D002115 ORTHO05D002263 6.3e-07 57.8 33 72.7
FAN18G1117 Fragaria x ananassa HOM05D002115 ORTHO05D002263 6.3e-07 57.8 33 72.7
FAN18G4052 Fragaria x ananassa HOM05D002115 ORTHO05D002263 6.3e-07 57.8 33 72.7
Glyma.05G014400 Glycine max HOM05D002115 ORTHO05D002263 6.3e-07 57.8 35 68.6
Oeu031805.1 Olea europaea HOM05D002115 ORTHO05D002263 6.3e-07 57.8 51 54.9
Potri.015G052400 Populus trichocarpa HOM05D002115 ORTHO05D002263 6.3e-07 57.8 33 72.7
MSTRG.11317 Avicennia marina HOM05D002115 ORTHO05D002263 1.1e-06 57.0 35 68.6
BcaB04g17377 Brassica carinata HOM05D002115 ORTHO05D002263 1.1e-06 57.0 52 53.8
BcaC07g37092 Brassica carinata HOM05D002115 ORTHO05D002263 1.1e-06 57.0 52 53.8
A08p04290 Brassica napus HOM05D002115 ORTHO05D002263 1.1e-06 57.0 52 53.8
C08p04560 Brassica napus HOM05D002115 ORTHO05D002263 1.1e-06 57.0 52 53.8
BolC8t47260H Brassica oleracea HOM05D002115 ORTHO05D002263 1.1e-06 57.0 52 53.8
BraA08t32456Z Brassica rapa HOM05D002115 ORTHO05D002263 1.1e-06 57.0 52 53.8
DCAR_011336 Daucus carota HOM05D002115 ORTHO05D002263 1.1e-06 57.0 35 77.1
Lj5A141T88 Lonicera japonica HOM05D002115 ORTHO05D002263 1.1e-06 57.0 35 68.6
Hund02529 Selenicereus undatus HOM05D002115 ORTHO05D002263 1.1e-06 57.0 104 32.7
AUR62036937 Chenopodium quinoa HOM05D002115 ORTHO05D002263 1.4e-06 56.6 34 61.8
Rhsim08G0138600 Rhododendron simsii HOM05D002115 ORTHO05D002263 1.4e-06 56.6 45 57.8
GSVIVG01008221001 Vitis vinifera HOM05D002115 ORTHO05D002263 1.4e-06 56.6 31 77.4
CiPaw.15G125000 Carya illinoinensis HOM05D002115 ORTHO05D002263 1.8e-06 56.2 47 53.2
arahy.Tifrunner.gnm1.ann1.SC3UAH Arachis hypogaea HOM05D002115 ORTHO05D002263 2.4e-06 55.8 59 44.1
Sabra15G0077500 Salix brachista HOM05D002115 ORTHO05D002263 2.4e-06 55.8 33 69.7
TPR.G26765 Trifolium pratense HOM05D002115 ORTHO05D002263 2.4e-06 55.8 35 65.7
CANSAT80G1296 Cannabis sativa HOM05D002115 ORTHO05D002263 3.1e-06 55.5 36 69.4
AUR62032177 Chenopodium quinoa HOM05D002115 ORTHO05D002263 3.1e-06 55.5 34 58.8
Migut.I00399 Erythranthe guttata HOM05D002115 ORTHO05D002263 3.1e-06 55.5 32 71.9
Thhalv10011335m.g Eutrema salsugineum HOM05D002115 ORTHO05D002263 3.1e-06 55.5 33 69.7
AT1G48950 Arabidopsis thaliana HOM05D002115 ORTHO05D002263 4.1e-06 55.1 35 65.7
arahy.Tifrunner.gnm1.ann1.PSZ3R8 Arachis hypogaea HOM05D002115 ORTHO05D002263 4.1e-06 55.1 32 71.9
Eucgr.K02649 Eucalyptus grandis HOM05D002115 ORTHO05D002263 4.1e-06 55.1 32 68.8
PGR044G1254 Punica granatum HOM05D002115 ORTHO05D002263 4.1e-06 55.1 35 65.7
Cpa.g.sc13.69 Carica papaya HOM05D002115 ORTHO05D002263 5.3e-06 54.7 33 66.7
ECA232G2843 Erigeron canadensis HOM05D002115 ORTHO05D002263 6.9e-06 54.3 38 57.9
Medtr4g111710 Medicago truncatula HOM05D002115 ORTHO05D002263 6.9e-06 54.3 33 69.7
AL1G55780 Arabidopsis lyrata HOM05D002115 ORTHO05D002263 9.1e-06 53.9 35 62.9
Psat4g046640 Pisum sativum HOM05D002115 ORTHO05D002263 9.1e-06 53.9 45 51.1


User provided reference genes

Program Settings