Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 5.4e-173 610.9 311 100.0
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 1.1e-152 543.5 284 97.2
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 8.7e-131 470.7 299 77.9
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 2.2e-126 456.1 300 76.0
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 8.4e-126 454.1 309 73.8
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 4.2e-125 451.8 309 74.1
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 2.7e-124 449.1 312 74.0
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.3e-123 446.0 312 72.8
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.3e-123 446.0 312 72.8
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 3.0e-123 445.7 298 75.8
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 6.7e-123 444.5 300 75.0
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 1.1e-122 443.7 312 73.1
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 1.9e-122 443.0 300 75.0
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 2.5e-122 442.6 315 72.7
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 7.4e-122 441.0 307 72.3
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 2.8e-121 439.1 306 73.9
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 2.8e-121 439.1 305 74.1
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 8.2e-121 437.6 314 71.7
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 9.0e-120 434.1 300 73.0
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 2.6e-119 432.6 312 72.1
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 4.5e-119 431.8 315 69.5
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 7.6e-119 431.0 267 80.1
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 7.6e-119 431.0 306 70.6
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 2.5e-117 426.0 313 69.0
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 1.6e-116 423.3 300 73.0
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 4.6e-116 421.8 304 70.4
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 7.9e-116 421.0 317 68.8
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 1.0e-115 420.6 312 67.6
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 1.0e-115 420.6 283 73.1
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 1.3e-115 420.2 301 69.8
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 6.7e-115 417.9 312 68.6
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 4.3e-114 415.2 314 67.2
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 4.3e-114 415.2 258 80.2
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 5.7e-114 414.8 350 64.3
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 7.4e-114 414.5 306 68.6
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 1.3e-113 413.7 311 68.5
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 1.6e-113 413.3 309 68.3
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 3.7e-113 412.1 311 68.2
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 3.7e-113 412.1 312 67.9
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 6.3e-113 411.4 299 69.6
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 8.2e-113 411.0 311 67.5
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 1.4e-112 410.2 301 69.8
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 1.8e-112 409.8 299 69.2
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 2.4e-112 409.5 285 73.3
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 6.9e-112 407.9 314 65.3
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 2.0e-111 406.4 310 66.5
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 2.6e-111 406.0 300 69.0
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 7.7e-111 404.4 282 75.2
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.2e-110 402.9 300 68.3
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 3.8e-110 402.1 253 79.4
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 6.5e-110 401.4 300 69.0
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.4e-109 400.2 294 69.7
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 3.2e-109 399.1 316 64.6
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 4.2e-109 398.7 263 74.9
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 7.2e-109 397.9 270 72.6
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 1.2e-108 397.1 312 65.4
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.6e-108 396.7 294 69.0
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 1.0e-107 394.0 313 63.3
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 1.0e-107 394.0 315 64.8
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 1.4e-107 393.7 337 62.0
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 3.9e-107 392.1 302 64.6
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 5.1e-107 391.7 261 76.2
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 8.8e-107 391.0 305 64.9
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 2.5e-106 389.4 312 66.7
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 4.3e-106 388.7 291 69.4
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 9.7e-106 387.5 304 65.1
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 1.3e-105 387.1 258 74.0
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 1.7e-105 386.7 313 63.9
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 2.8e-105 386.0 311 65.0
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 1.1e-104 384.0 264 74.2
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 1.1e-104 384.0 258 73.6
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 3.1e-104 382.5 302 62.9
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 4.1e-104 382.1 258 73.3
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 5.3e-104 381.7 308 64.3
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 1.2e-103 380.6 302 63.6
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 1.5e-103 380.2 302 64.9
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 1.5e-103 380.2 274 70.1
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 2.6e-103 379.4 256 74.2
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 2.6e-103 379.4 262 72.9
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 3.4e-103 379.0 251 72.9
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 3.4e-103 379.0 312 64.7
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 2.9e-102 375.9 292 67.1
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 5.0e-102 375.2 278 65.8
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 5.5e-101 371.7 301 63.8
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 3.6e-100 369.0 308 64.3
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 3.9e-99 365.5 325 58.5
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 5.1e-99 365.2 305 63.6
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 6.7e-99 364.8 311 60.1
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 8.8e-99 364.4 302 62.3
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 1.7e-97 360.1 267 66.7
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 1.5e-95 353.6 320 55.9
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 3.5e-95 352.4 262 64.1
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 7.7e-95 351.3 306 59.5
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 1.2e-92 344.0 314 58.6
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 2.6e-87 326.2 324 56.2
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 2.2e-86 323.2 388 52.8
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 6.3e-81 305.1 243 62.6
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 1.1e-80 304.3 330 52.1
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 5.0e-78 295.4 237 61.2
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 1.9e-77 293.5 259 55.6
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 2.5e-77 293.1 250 60.8
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 4.2e-77 292.4 241 63.1
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 1.2e-76 290.8 210 72.9
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 2.7e-76 289.7 189 73.5
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 3.6e-68 262.7 164 81.7
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 2.6e-66 256.5 163 77.9
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 7.5e-66 255.0 174 74.7
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 7.8e-63 245.0 293 45.7
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 1.9e-61 240.4 293 46.4
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 4.3e-61 239.2 258 48.1
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 9.8e-58 228.0 265 42.6
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 1.9e-56 223.8 153 73.2
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 3.5e-55 219.5 146 74.0
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 1.5e-50 204.1 179 60.3
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 5.1e-38 162.5 144 59.0
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 8.6e-38 161.8 314 38.9
Medtr3g040450 Medicago truncatula HOM05D005938 ORTHO05D007654 8.9e-35 151.8 110 69.1
VMungo0019G0001 Vigna mungo HOM05D005938 ORTHO05D007654 3.4e-34 149.8 110 70.0
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 1.9e-32 144.1 168 54.8
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 2.4e-32 143.7 280 33.9
FAN18G0131 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.7e-31 140.2 153 54.2
Prupe.5G190800 Prunus persica HOM05D005938 ORTHO05D007654 1.3e-28 131.3 94 72.3
CSS0038577 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 2.2e-25 120.6 82 69.5
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 2.9e-25 120.2 247 32.8
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 1.1e-24 118.2 80 72.5
FAN01G1759 Fragaria x ananassa HOM05D005938 ORTHO05D007654 4.2e-24 116.3 92 64.1
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 7.1e-24 115.5 69 76.8
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 2.1e-23 114.0 68 76.5
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 1.7e-22 110.9 256 34.0
Thhalv10000377m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 3.2e-08 63.5 91 39.6


User provided reference genes

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